RNA–Protein interactions for RNA: ENST00000281821.6

EPHA4-201, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA4, Length 6,346 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-201ENST00000281821 ST3GAL1Q11201 340 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 CTAGE6Q86UF2 777 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 CTAGE4Q8IX94 777 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 GRK7Q8WTQ7 553 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 INTS13Q9NVM9 706 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 GTF2IRD1Q9UHL9 959 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 ZKSCAN5Q9Y2L8 839 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 PFDN6O15212 129 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 F9P00740 461 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 NCKAP1LP55160 1127 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 BEX3Q00994 111 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 RNF10Q8N5U6 811 aaKnown RBP8.32□□□□□ -1.08
EPHA4-201ENST00000281821 CYP2W1Q8TAV3 490 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 FAM149B1Q96BN6 582 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 PPP1R2P1Q96PQ5 205 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 PRDM16Q9HAZ2 1276 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 PRM3Q9NNZ6 103 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.32□□□□□ -1.08
EPHA4-201ENST00000281821 APEX2Q9UBZ4 518 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 MTRF1LQ9UGC7 380 aaKnown RBP8.32□□□□□ -1.08
EPHA4-201ENST00000281821 OR6C75A6NL08 312 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 HSPA1AP0DMV8 641 aaKnown RBP8.32□□□□□ -1.08
EPHA4-201ENST00000281821 HSPA1BP0DMV9 641 aaKnown RBP8.32□□□□□ -1.08
EPHA4-201ENST00000281821 COG7P83436 770 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 RPS6KA1Q15418 735 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 PREPLQ4J6C6 727 aaPredicted RBP8.32□□□□□ -1.08
EPHA4-201ENST00000281821 CCHCR1Q8TD31 782 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 GOLPH3LQ9H4A5 285 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 ASNSD1Q9NWL6 643 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 EPN1Q9Y6I3 576 aaPredicted RBP8.32□□□□□ -1.08
EPHA4-201ENST00000281821 SF3B1O75533 1304 aaKnown RBP eCLIP8.32□□□□□ -1.08
EPHA4-201ENST00000281821 LSM8O95777 96 aaKnown RBP8.32□□□□□ -1.08
EPHA4-201ENST00000281821 CCDC15Q0P6D6 951 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 CALCOCO2Q13137 446 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 E2F4Q16254 413 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 FAM187BQ17R55 369 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 HSDL1Q3SXM5 330 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 FBXO47Q5MNV8 452 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 CRACR2AQ9BSW2 395 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 TMEM161AQ9NX61 479 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 GOLGA8IPA6NC78 632 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 GOLGA8JA6NMD2 632 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 PEX26Q7Z412 305 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 GRAMD1CQ8IYS0 662 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 TTC13Q8NBP0 860 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 HPDLQ96IR7 371 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 DPP3Q9NY33 737 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 PHF24Q9UPV7 400 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 EML1O00423 815 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 ATP9AO75110 1047 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 GHRP10912 638 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 VDRP11473 427 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 GLRA2P23416 452 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 NOP14P78316 857 aaKnown RBP8.31□□□□□ -1.08
EPHA4-201ENST00000281821 CACNB2Q08289 660 aaPredicted RBP8.31□□□□□ -1.08
EPHA4-201ENST00000281821 HSP90AA4PQ58FG1 418 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 EFHC1Q5JVL4 640 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 CCDC62Q6P9F0 684 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 CCNE2O96020 404 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 PAEPP09466 180 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 GBP2P32456 591 aaPredicted RBP8.31□□□□□ -1.08
EPHA4-201ENST00000281821 OXCT1P55809 520 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 FPGSQ05932 587 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 TUSC3Q13454 348 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 PABPC1LQ4VXU2 614 aaKnown RBP8.31□□□□□ -1.08
EPHA4-201ENST00000281821 CNKSR3Q6P9H4 555 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 UPF3AQ9H1J1 476 aaKnown RBP8.31□□□□□ -1.08
EPHA4-201ENST00000281821 UVRAGQ9P2Y5 699 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 INTUQ9ULD6 942 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 NRXN2Q9P2S2 1712 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 PIGRP01833 764 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 CDK17Q00537 523 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 LRMPQ12912 555 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 ZDHHC17Q8IUH5 632 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 NPAS4Q8IUM7 802 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 CCDC50Q8IVM0 306 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 WBP1LQ9NX94 342 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 SNX9Q9Y5X1 595 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 HLA-DRAP01903 254 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 SDC4P31431 198 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 ARL2P36404 184 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 OR1G1P47890 313 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 LMAN1P49257 510 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 PLCB3Q01970 1234 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 CYP24A1Q07973 514 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 ANKS3Q6ZW76 656 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 EFCAB13Q8IY85 973 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 GPR161Q8N6U8 529 aaKnown RBP8.31□□□□□ -1.08
EPHA4-201ENST00000281821 EFHBQ8N7U6 833 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 C4orf32Q8N8J7 132 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 SLC9A7Q96T83 725 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 ADAM2Q99965 735 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 ARHGAP28Q9P2N2 729 aa8.31□□□□□ -1.08
EPHA4-201ENST00000281821 TIAM2Q8IVF5 1701 aa8.3□□□□□ -1.08
EPHA4-201ENST00000281821 SLC12A3P55017 1021 aa8.3□□□□□ -1.08
EPHA4-201ENST00000281821 CYP4A22Q5TCH4 519 aa8.3□□□□□ -1.08
EPHA4-201ENST00000281821 CC2D1AQ6P1N0 951 aaPredicted RBP8.3□□□□□ -1.08
EPHA4-201ENST00000281821 ZNF354CQ86Y25 554 aa8.3□□□□□ -1.08
EPHA4-201ENST00000281821 IFNLR1Q8IU57 520 aaPredicted RBP8.3□□□□□ -1.08
EPHA4-201ENST00000281821 TMEM161BQ8NDZ6 487 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms