RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 JADE1Q6IE81 842 aa7.1□□□□□ -1.27
CD44-204ENST00000279452 FUT10Q6P4F1 479 aa7.1□□□□□ -1.27
CD44-204ENST00000279452 ADGRD2Q7Z7M1 963 aa7.1□□□□□ -1.27
CD44-204ENST00000279452 DDX53Q86TM3 631 aaKnown RBP7.1□□□□□ -1.27
CD44-204ENST00000279452 GLYCTKQ8IVS8 523 aa7.1□□□□□ -1.27
CD44-204ENST00000279452 SMYD4Q8IYR2 804 aaPredicted RBP7.1□□□□□ -1.27
CD44-204ENST00000279452 GPD1LQ8N335 351 aa7.1□□□□□ -1.27
CD44-204ENST00000279452 RDH13Q8NBN7 331 aa7.1□□□□□ -1.27
CD44-204ENST00000279452 KIAA0895Q8NCT3 520 aa7.1□□□□□ -1.27
CD44-204ENST00000279452 GSTCDQ8NEC7 633 aa7.1□□□□□ -1.27
CD44-204ENST00000279452 BEST2Q8NFU1 509 aa7.1□□□□□ -1.27
CD44-204ENST00000279452 SCFD1Q8WVM8 642 aa7.1□□□□□ -1.27
CD44-204ENST00000279452 B3GALT6Q96L58 329 aa7.1□□□□□ -1.27
CD44-204ENST00000279452 UROC1Q96N76 676 aa7.1□□□□□ -1.27
CD44-204ENST00000279452 PPP1R10Q96QC0 940 aaKnown RBP7.1□□□□□ -1.27
CD44-204ENST00000279452 STRA6Q9BX79 667 aa7.1□□□□□ -1.27
CD44-204ENST00000279452 EMILIN2Q9BXX0 1053 aa7.1□□□□□ -1.27
CD44-204ENST00000279452 TLE6Q9H808 572 aa7.1□□□□□ -1.27
CD44-204ENST00000279452 PLEKHA5Q9HAU0 1116 aa7.1□□□□□ -1.27
CD44-204ENST00000279452 PRDM6Q9NQX0 595 aa7.1□□□□□ -1.27
CD44-204ENST00000279452 MRPL17Q9NRX2 175 aaKnown RBP7.1□□□□□ -1.27
CD44-204ENST00000279452 AGPAT3Q9NRZ7 376 aa7.1□□□□□ -1.27
CD44-204ENST00000279452 HSPBP1Q9NZL4 362 aa7.1□□□□□ -1.27
CD44-204ENST00000279452 CNTN3Q9P232 1028 aa7.1□□□□□ -1.27
CD44-204ENST00000279452 CPSF3Q9UKF6 684 aaKnown RBP7.1□□□□□ -1.27
CD44-204ENST00000279452 ADAM28Q9UKQ2 775 aa7.1□□□□□ -1.27
CD44-204ENST00000279452 UBQLN1Q9UMX0 589 aaKnown RBP7.1□□□□□ -1.27
CD44-204ENST00000279452 LZTS1Q9Y250 596 aa7.1□□□□□ -1.27
CD44-204ENST00000279452 R3HCC1Q9Y3T6 440 aaKnown RBP7.1□□□□□ -1.27
CD44-204ENST00000279452 RALGAPA2Q2PPJ7 1873 aa7.1□□□□□ -1.27
CD44-204ENST00000279452 KIAA1671Q9BY89 1806 aa7.1□□□□□ -1.27
CD44-204ENST00000279452 FNDC1Q4ZHG4 1894 aaPredicted RBP7.09□□□□□ -1.27
CD44-204ENST00000279452 NLRC5Q86WI3 1866 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 HIDE1A8MVS5 230 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 I3L4J1 428 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 BIN1O00499 593 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 TRAPPC3O43617 180 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 CALUO43852 315 aaPredicted RBP7.09□□□□□ -1.27
CD44-204ENST00000279452 EXTL3O43909 919 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 EXOC3O60645 756 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 RHOBTB3O94955 611 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 IL18RAPO95256 599 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 SOD2P04179 222 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 KRT19P08727 400 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 TMEM191BP0C7N4 346 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 KCNA5P22460 613 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 ADSSP30520 456 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 GTF2F1P35269 517 aaKnown RBP eCLIP7.09□□□□□ -1.27
CD44-204ENST00000279452 BRCC3P46736 316 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 GUCY2FP51841 1108 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 SOX4Q06945 474 aaPredicted RBP7.09□□□□□ -1.27
CD44-204ENST00000279452 EHHADHQ08426 723 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 STIM1Q13586 685 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 CLUL1Q15846 466 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 FAM171A1Q5VUB5 890 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 CEP135Q66GS9 1140 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 PDE12Q6L8Q7 609 aaKnown RBP7.09□□□□□ -1.27
CD44-204ENST00000279452 EPM2AIP1Q7L775 607 aaPredicted RBP7.09□□□□□ -1.27
CD44-204ENST00000279452 CBWD2Q8IUF1 395 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 CD302Q8IX05 232 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 ZSWIM2Q8NEG5 633 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 ENGASEQ8NFI3 743 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 GOLGA5Q8TBA6 731 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 ZNF507Q8TCN5 953 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 RIN2Q8WYP3 895 aaPredicted RBP7.09□□□□□ -1.27
CD44-204ENST00000279452 KCNN1Q92952 543 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 HLA-CQ95604 372 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 CCDC127Q96BQ5 260 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 DDX27Q96GQ7 796 aaKnown RBP7.09□□□□□ -1.27
CD44-204ENST00000279452 TIGD1Q96MW7 591 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 ZMAT2Q96NC0 199 aaKnown RBP7.09□□□□□ -1.27
CD44-204ENST00000279452 HERC2P3Q9BVR0 1158 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 ZBP1Q9H171 429 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 NGRNQ9NPE2 291 aaKnown RBP7.09□□□□□ -1.27
CD44-204ENST00000279452 THEGQ9P2T0 379 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 STK39Q9UEW8 545 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 SSX2IPQ9Y2D8 614 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 STYXL1Q9Y6J8 313 aa7.09□□□□□ -1.27
CD44-204ENST00000279452 RANBP2P49792 3224 aaKnown RBP7.08□□□□□ -1.28
CD44-204ENST00000279452 TTC26A0AVF1 554 aa7.08□□□□□ -1.28
CD44-204ENST00000279452 ZNF233A6NK53 670 aa7.08□□□□□ -1.28
CD44-204ENST00000279452 H3BQ06 376 aaPredicted RBP7.08□□□□□ -1.28
CD44-204ENST00000279452 KIAA0391O15091 583 aaKnown RBP7.08□□□□□ -1.28
CD44-204ENST00000279452 LINC01565O15544 149 aa7.08□□□□□ -1.28
CD44-204ENST00000279452 MEFVO15553 781 aaPredicted RBP7.08□□□□□ -1.28
CD44-204ENST00000279452 TGFB1I1O43294 461 aa7.08□□□□□ -1.28
CD44-204ENST00000279452 FAM189A1O60320 539 aa7.08□□□□□ -1.28
CD44-204ENST00000279452 TNNC2P02585 160 aa7.08□□□□□ -1.28
CD44-204ENST00000279452 DLATP10515 647 aaKnown RBP7.08□□□□□ -1.28
CD44-204ENST00000279452 CTSAP10619 480 aa7.08□□□□□ -1.28
CD44-204ENST00000279452 KCNE1P15382 129 aa7.08□□□□□ -1.28
CD44-204ENST00000279452 TNNI1P19237 187 aa7.08□□□□□ -1.28
CD44-204ENST00000279452 POU3F3P20264 500 aaPredicted RBP7.08□□□□□ -1.28
CD44-204ENST00000279452 KLRC2P26717 231 aa7.08□□□□□ -1.28
CD44-204ENST00000279452 HOXD13P35453 343 aa7.08□□□□□ -1.28
CD44-204ENST00000279452 ARPP19P56211 112 aa7.08□□□□□ -1.28
CD44-204ENST00000279452 TFF2Q03403 129 aa7.08□□□□□ -1.28
CD44-204ENST00000279452 HYAL1Q12794 435 aa7.08□□□□□ -1.28
CD44-204ENST00000279452 ELAVL2Q12926 359 aaKnown RBP7.08□□□□□ -1.28
CD44-204ENST00000279452 CAMK1Q14012 370 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms