RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 INPP5FQ9Y2H2 1132 aa14.36□□□□□ -0.11
ACER3-201ENST00000278544 CNTNAP2Q9UHC6 1331 aa14.36□□□□□ -0.11
ACER3-201ENST00000278544 KBTBD13C9JR72 458 aa14.36□□□□□ -0.11
ACER3-201ENST00000278544 IGFBP6P24592 240 aaPredicted RBP14.36□□□□□ -0.11
ACER3-201ENST00000278544 NCOA4Q13772 614 aa14.36□□□□□ -0.11
ACER3-201ENST00000278544 TRAPPC11Q7Z392 1133 aa14.36□□□□□ -0.11
ACER3-201ENST00000278544 TMTC1Q8IUR5 882 aa14.36□□□□□ -0.11
ACER3-201ENST00000278544 LMO3Q8TAP4 145 aa14.36□□□□□ -0.11
ACER3-201ENST00000278544 KIF12Q96FN5 646 aa14.36□□□□□ -0.11
ACER3-201ENST00000278544 CPSF3Q9UKF6 684 aaKnown RBP14.36□□□□□ -0.11
ACER3-201ENST00000278544 ADGRG1Q9Y653 693 aa14.36□□□□□ -0.11
ACER3-201ENST00000278544 ZNF263O14978 683 aa14.36□□□□□ -0.11
ACER3-201ENST00000278544 FAM189A1O60320 539 aa14.36□□□□□ -0.11
ACER3-201ENST00000278544 LDHAP00338 332 aaKnown RBP14.36□□□□□ -0.11
ACER3-201ENST00000278544 ABCB4P21439 1286 aa14.36□□□□□ -0.11
ACER3-201ENST00000278544 KIF11P52732 1056 aa14.36□□□□□ -0.11
ACER3-201ENST00000278544 MRPS6P82932 125 aaKnown RBP14.36□□□□□ -0.11
ACER3-201ENST00000278544 PTPN14Q15678 1187 aa14.36□□□□□ -0.11
ACER3-201ENST00000278544 NFIL3Q16649 462 aa14.36□□□□□ -0.11
ACER3-201ENST00000278544 CCSAPQ6IQ19 270 aaPredicted RBP14.36□□□□□ -0.11
ACER3-201ENST00000278544 PALB2Q86YC2 1186 aa14.36□□□□□ -0.11
ACER3-201ENST00000278544 GLYCTKQ8IVS8 523 aa14.36□□□□□ -0.11
ACER3-201ENST00000278544 ACAP3Q96P50 834 aa14.36□□□□□ -0.11
ACER3-201ENST00000278544 LACRTQ9GZZ8 138 aa14.36□□□□□ -0.11
ACER3-201ENST00000278544 CGNQ9P2M7 1197 aaKnown RBP14.36□□□□□ -0.11
ACER3-201ENST00000278544 POLIQ9UNA4 740 aa14.36□□□□□ -0.11
ACER3-201ENST00000278544 PLAGL2Q9UPG8 496 aa14.36□□□□□ -0.11
ACER3-201ENST00000278544 A0A087X0T9 212 aa14.35□□□□□ -0.11
ACER3-201ENST00000278544 PPEF2O14830 753 aa14.35□□□□□ -0.11
ACER3-201ENST00000278544 RECQL4O94761 1208 aa14.35□□□□□ -0.11
ACER3-201ENST00000278544 FAM228BP0C875 321 aa14.35□□□□□ -0.11
ACER3-201ENST00000278544 CCL23P55773 120 aa14.35□□□□□ -0.11
ACER3-201ENST00000278544 PSMD6Q15008 389 aa14.35□□□□□ -0.11
ACER3-201ENST00000278544 PAN2Q504Q3 1202 aaKnown RBP14.35□□□□□ -0.11
ACER3-201ENST00000278544 ARHGAP29Q52LW3 1261 aa14.35□□□□□ -0.11
ACER3-201ENST00000278544 DPY19L2P1Q6NXN4 242 aa14.35□□□□□ -0.11
ACER3-201ENST00000278544 BRSK2Q8IWQ3 736 aa14.35□□□□□ -0.11
ACER3-201ENST00000278544 NT5C1BQ96P26 610 aa14.35□□□□□ -0.11
ACER3-201ENST00000278544 APOBEC3GQ9HC16 384 aaKnown RBP14.35□□□□□ -0.11
ACER3-201ENST00000278544 DNAI1Q9UI46 699 aa14.35□□□□□ -0.11
ACER3-201ENST00000278544 REXO2Q9Y3B8 237 aaKnown RBP14.35□□□□□ -0.11
ACER3-201ENST00000278544 NUB1Q9Y5A7 615 aa14.35□□□□□ -0.11
ACER3-201ENST00000278544 A0A1B0GUA9 196 aa14.35□□□□□ -0.11
ACER3-201ENST00000278544 IPO7O95373 1038 aaKnown RBP14.35□□□□□ -0.11
ACER3-201ENST00000278544 WDR72Q3MJ13 1102 aa14.35□□□□□ -0.11
ACER3-201ENST00000278544 FOXR2Q6PJQ5 311 aa14.35□□□□□ -0.11
ACER3-201ENST00000278544 ZNF571Q7Z3V5 609 aaPredicted RBP14.35□□□□□ -0.11
ACER3-201ENST00000278544 SLC47A2Q86VL8 602 aa14.35□□□□□ -0.11
ACER3-201ENST00000278544 PASD1Q8IV76 773 aa14.35□□□□□ -0.11
ACER3-201ENST00000278544 ZMAT2Q96NC0 199 aaKnown RBP14.35□□□□□ -0.11
ACER3-201ENST00000278544 STYXL1Q9Y6J8 313 aa14.35□□□□□ -0.11
ACER3-201ENST00000278544 ZNF236Q9UL36 1845 aa14.35□□□□□ -0.11
ACER3-201ENST00000278544 BUB1O43683 1085 aa14.35□□□□□ -0.11
ACER3-201ENST00000278544 CCDC175P0C221 793 aa14.35□□□□□ -0.11
ACER3-201ENST00000278544 GNG11P61952 73 aa14.35□□□□□ -0.11
ACER3-201ENST00000278544 PPP2R3AQ06190 1150 aa14.35□□□□□ -0.11
ACER3-201ENST00000278544 WDR44Q5JSH3 913 aa14.35□□□□□ -0.11
ACER3-201ENST00000278544 SCLYQ96I15 445 aa14.35□□□□□ -0.11
ACER3-201ENST00000278544 UPF3AQ9H1J1 476 aaKnown RBP14.35□□□□□ -0.11
ACER3-201ENST00000278544 TRIP11Q15643 1979 aa14.34□□□□□ -0.11
ACER3-201ENST00000278544 SGPL1O95470 568 aa14.34□□□□□ -0.11
ACER3-201ENST00000278544 PIGRP01833 764 aa14.34□□□□□ -0.11
ACER3-201ENST00000278544 C4BPAP04003 597 aaKnown RBP14.34□□□□□ -0.11
ACER3-201ENST00000278544 NOTUMQ6P988 496 aa14.34□□□□□ -0.11
ACER3-201ENST00000278544 USP37Q86T82 979 aa14.34□□□□□ -0.11
ACER3-201ENST00000278544 ZNF410Q86VK4 478 aa14.34□□□□□ -0.11
ACER3-201ENST00000278544 U2AF1L4Q8WU68 220 aaKnown RBP14.34□□□□□ -0.11
ACER3-201ENST00000278544 MMS19Q96T76 1030 aa14.34□□□□□ -0.11
ACER3-201ENST00000278544 GOLPH3Q9H4A6 298 aa14.34□□□□□ -0.11
ACER3-201ENST00000278544 TUBGCP4Q9UGJ1 667 aa14.34□□□□□ -0.11
ACER3-201ENST00000278544 PADI3Q9ULW8 664 aa14.34□□□□□ -0.11
ACER3-201ENST00000278544 F8VZ95 297 aa14.34□□□□□ -0.11
ACER3-201ENST00000278544 POLR2BP30876 1174 aaKnown RBP14.34□□□□□ -0.11
ACER3-201ENST00000278544 NOP14P78316 857 aaKnown RBP14.34□□□□□ -0.11
ACER3-201ENST00000278544 MYBPC2Q14324 1141 aa14.34□□□□□ -0.11
ACER3-201ENST00000278544 DUOXA2Q1HG44 320 aa14.34□□□□□ -0.11
ACER3-201ENST00000278544 HGSNATQ68CP4 663 aa14.34□□□□□ -0.11
ACER3-201ENST00000278544 SRGAP1Q7Z6B7 1085 aa14.34□□□□□ -0.11
ACER3-201ENST00000278544 RSPH3Q86UC2 560 aa14.34□□□□□ -0.11
ACER3-201ENST00000278544 REXO1L1PQ8IX06 675 aa14.34□□□□□ -0.11
ACER3-201ENST00000278544 ARRDC4Q8NCT1 418 aa14.34□□□□□ -0.11
ACER3-201ENST00000278544 PSMB7Q99436 277 aa14.34□□□□□ -0.11
ACER3-201ENST00000278544 C1orf112Q9NSG2 853 aa14.34□□□□□ -0.11
ACER3-201ENST00000278544 AGAP1Q9UPQ3 857 aa14.34□□□□□ -0.11
ACER3-201ENST00000278544 PPME1Q9Y570 386 aa14.34□□□□□ -0.11
ACER3-201ENST00000278544 STAT1P42224 750 aa14.33□□□□□ -0.11
ACER3-201ENST00000278544 SPA17Q15506 151 aa14.33□□□□□ -0.11
ACER3-201ENST00000278544 ZACNQ401N2 412 aa14.33□□□□□ -0.11
ACER3-201ENST00000278544 TAF2Q6P1X5 1199 aa14.33□□□□□ -0.11
ACER3-201ENST00000278544 TMEM270Q6UE05 265 aa14.33□□□□□ -0.11
ACER3-201ENST00000278544 SERINC5Q86VE9 423 aa14.33□□□□□ -0.11
ACER3-201ENST00000278544 CGRRF1Q99675 332 aa14.33□□□□□ -0.11
ACER3-201ENST00000278544 CFHR5Q9BXR6 569 aa14.33□□□□□ -0.11
ACER3-201ENST00000278544 PROZP22891 400 aa14.33□□□□□ -0.12
ACER3-201ENST00000278544 CRYBB1P53674 252 aaPredicted RBP14.33□□□□□ -0.12
ACER3-201ENST00000278544 CCDC122Q5T0U0 273 aa14.33□□□□□ -0.12
ACER3-201ENST00000278544 DEFB128Q7Z7B8 93 aa14.33□□□□□ -0.12
ACER3-201ENST00000278544 CCDC94Q9BW85 323 aaPredicted RBP14.33□□□□□ -0.12
ACER3-201ENST00000278544 PDCL3Q9H2J4 239 aa14.33□□□□□ -0.12
ACER3-201ENST00000278544 KIAA1586Q9HCI6 787 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms