RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 RNASE9P60153 205 aaKnown RBP11.07□□□□□ -0.64
UPF3B-201ENST00000276201 PPP1R7Q15435 360 aa11.07□□□□□ -0.64
UPF3B-201ENST00000276201 ANKLE1Q8NAG6 615 aa11.07□□□□□ -0.64
UPF3B-201ENST00000276201 DNERQ8NFT8 737 aa11.07□□□□□ -0.64
UPF3B-201ENST00000276201 CFAP61Q8NHU2 1237 aa11.07□□□□□ -0.64
UPF3B-201ENST00000276201 SPAG5Q96R06 1193 aa11.07□□□□□ -0.64
UPF3B-201ENST00000276201 TAAR1Q96RJ0 339 aa11.07□□□□□ -0.64
UPF3B-201ENST00000276201 SYT11Q9BT88 431 aa11.07□□□□□ -0.64
UPF3B-201ENST00000276201 HOMER3Q9NSC5 361 aa11.07□□□□□ -0.64
UPF3B-201ENST00000276201 ARMCX3Q9UH62 379 aaPredicted RBP11.07□□□□□ -0.64
UPF3B-201ENST00000276201 PCYOX1Q9UHG3 505 aa11.07□□□□□ -0.64
UPF3B-201ENST00000276201 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.07□□□□□ -0.64
UPF3B-201ENST00000276201 DDX3XO00571 662 aaKnown RBP eCLIP11.06□□□□□ -0.642e-9■■■□□ 14.7
UPF3B-201ENST00000276201 PODXLO00592 558 aa11.06□□□□□ -0.64
UPF3B-201ENST00000276201 CALUO43852 315 aaPredicted RBP11.06□□□□□ -0.64
UPF3B-201ENST00000276201 DR1Q01658 176 aa11.06□□□□□ -0.64
UPF3B-201ENST00000276201 MOXD1Q6UVY6 613 aa11.06□□□□□ -0.64
UPF3B-201ENST00000276201 ZDHHC24Q6UX98 284 aa11.06□□□□□ -0.64
UPF3B-201ENST00000276201 EEPD1Q7L9B9 569 aa11.06□□□□□ -0.64
UPF3B-201ENST00000276201 APLFQ8IW19 511 aaPredicted RBP11.06□□□□□ -0.64
UPF3B-201ENST00000276201 FBXO16Q8IX29 292 aaPredicted RBP11.06□□□□□ -0.64
UPF3B-201ENST00000276201 LRRC34Q8IZ02 419 aa11.06□□□□□ -0.64
UPF3B-201ENST00000276201 MBOAT7Q96N66 472 aa11.06□□□□□ -0.64
UPF3B-201ENST00000276201 GLT8D2Q9H1C3 349 aa11.06□□□□□ -0.64
UPF3B-201ENST00000276201 INTS9Q9NV88 658 aaKnown RBP11.06□□□□□ -0.64
UPF3B-201ENST00000276201 MKI67P46013 3256 aaKnown RBP11.06□□□□□ -0.64
UPF3B-201ENST00000276201 TNRC18O15417 2968 aaPredicted RBP11.06□□□□□ -0.64
UPF3B-201ENST00000276201 POTEMA6NI47 508 aa11.06□□□□□ -0.64
UPF3B-201ENST00000276201 KIAA0391O15091 583 aaKnown RBP11.06□□□□□ -0.64
UPF3B-201ENST00000276201 RGS16O15492 202 aaPredicted RBP11.06□□□□□ -0.64
UPF3B-201ENST00000276201 SNX3O60493 162 aa11.06□□□□□ -0.64
UPF3B-201ENST00000276201 BUB1BO60566 1050 aaPredicted RBP11.06□□□□□ -0.64
UPF3B-201ENST00000276201 CYP11B2P19099 503 aa11.06□□□□□ -0.64
UPF3B-201ENST00000276201 CHRNA3P32297 505 aa11.06□□□□□ -0.64
UPF3B-201ENST00000276201 PTGIRP43119 386 aa11.06□□□□□ -0.64
UPF3B-201ENST00000276201 DNA2P51530 1060 aa11.06□□□□□ -0.64
UPF3B-201ENST00000276201 ECM1Q16610 540 aa11.06□□□□□ -0.64
UPF3B-201ENST00000276201 ZNF568Q3ZCX4 644 aa11.06□□□□□ -0.64
UPF3B-201ENST00000276201 TAOK1Q7L7X3 1001 aa11.06□□□□□ -0.64
UPF3B-201ENST00000276201 HAS1Q92839 578 aa11.06□□□□□ -0.64
UPF3B-201ENST00000276201 RNF25Q96BH1 459 aaPredicted RBP11.06□□□□□ -0.64
UPF3B-201ENST00000276201 PAWRQ96IZ0 340 aaKnown RBP11.06□□□□□ -0.64
UPF3B-201ENST00000276201 RMDN3Q96TC7 470 aa11.06□□□□□ -0.64
UPF3B-201ENST00000276201 VTA1Q9NP79 307 aa11.06□□□□□ -0.64
UPF3B-201ENST00000276201 CYP3A7-CYP3A51PA0A087WV96 503 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.05□□□□□ -0.64
UPF3B-201ENST00000276201 MIF4GDA9UHW6 222 aaKnown RBP11.05□□□□□ -0.64
UPF3B-201ENST00000276201 PHF2O75151 1096 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 GJB6O95452 261 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 TDP2O95551 362 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 PLA2G4BP0C869 781 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 POLR2MP0CAP2 368 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 RARBP10826 455 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 CYP3A7P24462 503 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 STAT1P42224 750 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 NCALDP61601 193 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 CCDC15Q0P6D6 951 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 MAPK7Q13164 816 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 TAPT1Q6NXT6 567 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 SAMD3Q8N6K7 520 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 NSUN6Q8TEA1 469 aaKnown RBP11.05□□□□□ -0.64
UPF3B-201ENST00000276201 VTI1AQ96AJ9 217 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 IFT74Q96LB3 600 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 XPNPEP3Q9NQH7 507 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 PDGFCQ9NRA1 345 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 TMEM260Q9NX78 707 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 MAP3K20Q9NYL2 800 aaKnown RBP11.05□□□□□ -0.64
UPF3B-201ENST00000276201 MTRF1LQ9UGC7 380 aaKnown RBP11.05□□□□□ -0.64
UPF3B-201ENST00000276201 ATP8A1Q9Y2Q0 1164 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 FGGP02679 453 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 RARAP10276 462 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 RARGP13631 454 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 EIF2AK2P19525 551 aaKnown RBP11.05□□□□□ -0.64
UPF3B-201ENST00000276201 NR2F2P24468 414 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 RPL13P26373 211 aaKnown RBP11.05□□□□□ -0.64
UPF3B-201ENST00000276201 ADCYAP1R1P41586 468 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 GALCP54803 685 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 BNIP1Q12981 228 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 E2F5Q15329 346 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 CNGA2Q16280 664 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 CYP1B1Q16678 543 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 KNOP1Q1ED39 458 aaKnown RBP11.05□□□□□ -0.64
UPF3B-201ENST00000276201 CDCA2Q69YH5 1023 aaPredicted RBP11.05□□□□□ -0.64
UPF3B-201ENST00000276201 C11orf63Q6NUN7 778 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 DAAM2Q86T65 1068 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 JAMLQ86YT9 394 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 MDM1Q8TC05 714 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 PXMP2Q9NR77 195 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 ARHGEF3Q9NR81 526 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 GRHL1Q9NZI5 618 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 BAIAP2L1Q9UHR4 511 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 USP15Q9Y4E8 981 aaPredicted RBP11.05□□□□□ -0.64
UPF3B-201ENST00000276201 PDE4DIPQ5VU43 2346 aa11.05□□□□□ -0.64
UPF3B-201ENST00000276201 ABLIM1O14639 778 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 ANP32DO95626 131 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 PGK1P00558 417 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 SSBP05455 408 aaKnown RBP eCLIP11.04□□□□□ -0.64
UPF3B-201ENST00000276201 COL6A1P12109 1028 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 SLC9A1P19634 815 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 RFX1P22670 979 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms