RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 STRN3Q13033 797 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 WDR45BQ5MNZ6 344 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 ANKRD40Q6AI12 368 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 SPOPLQ6IQ16 392 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 DCDC5Q6ZRR9 648 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 RAVER1Q8IY67 606 aaKnown RBP9.77□□□□□ -0.85
PDGFC-201ENST00000274071 PLBD2Q8NHP8 589 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 OSBP2Q969R2 916 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 PTCD3Q96EY7 689 aaKnown RBP9.77□□□□□ -0.85
PDGFC-201ENST00000274071 GPATCH1Q9BRR8 931 aaKnown RBP9.77□□□□□ -0.85
PDGFC-201ENST00000274071 ARL8BQ9NVJ2 186 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 MTUS1Q9ULD2 1270 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 SNX9Q9Y5X1 595 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 AK5Q9Y6K8 562 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 A0A087X0T9 212 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 CFAP69A5D8W1 941 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 NOTOA8MTQ0 251 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 TTC34A8MYJ7 566 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 F8W8V4 182 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 ZWINTO95229 277 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 FAM228BP0C875 321 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 UBL4AP11441 157 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 COPB2P35606 906 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 EARS2Q5JPH6 523 aaKnown RBP9.77□□□□□ -0.85
PDGFC-201ENST00000274071 KIAA1755Q5JYT7 1200 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 IL23RQ5VWK5 629 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 PDXDC1Q6P996 788 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 ISLR2Q6UXK2 745 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 FASTKD5Q7L8L6 764 aaKnown RBP9.77□□□□□ -0.85
PDGFC-201ENST00000274071 ZNF410Q86VK4 478 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 GRAMD2AQ8IUY3 354 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 FAM20CQ8IXL6 584 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 LRRC57Q8N9N7 239 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 RRN3Q9NYV6 651 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 PPM1HQ9ULR3 514 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 LZTS1Q9Y250 596 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 LOC105371267A0A1B0GV96 52 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 HAUS5O94927 633 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 CDH2P19022 906 aaPredicted RBP9.76□□□□□ -0.85
PDGFC-201ENST00000274071 PHKA2P46019 1235 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 CSE1LP55060 971 aaKnown RBP9.76□□□□□ -0.85
PDGFC-201ENST00000274071 WDR4P57081 412 aaKnown RBP9.76□□□□□ -0.85
PDGFC-201ENST00000274071 ZBTB17Q13105 803 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 ARHGEF6Q15052 776 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 GPR162Q16538 588 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 SLC18A3Q16572 532 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 MMEL1Q495T6 779 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 SLC9C1Q4G0N8 1177 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 NLRP9Q7RTR0 991 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 VPS36Q86VN1 386 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 MCF2L2Q86YR7 1114 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 ESX1Q8N693 406 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 PIP4K2CQ8TBX8 421 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 USP6NLQ92738 828 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 SERPINB12Q96P63 405 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 EHD1Q9H4M9 534 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 LIN28AQ9H9Z2 209 aaKnown RBP9.76□□□□□ -0.85
PDGFC-201ENST00000274071 SLC38A7Q9NVC3 462 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 NKIRAS1Q9NYS0 192 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 GRHL1Q9NZI5 618 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 ADAMTS1Q9UHI8 967 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 SLC12A7Q9Y666 1083 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 WDR19Q8NEZ3 1342 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 C15orf38-AP3S2A0A0A6YYH1 394 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 SOBPA7XYQ1 873 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 RNF113AO15541 343 aaKnown RBP9.76□□□□□ -0.85
PDGFC-201ENST00000274071 FGGP02679 453 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 RARGP13631 454 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 EEF2P13639 858 aaKnown RBP9.76□□□□□ -0.85
PDGFC-201ENST00000274071 ATP6V1B1P15313 513 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 TCEA1P23193 301 aaKnown RBP9.76□□□□□ -0.85
PDGFC-201ENST00000274071 DRG2P55039 364 aaKnown RBP9.76□□□□□ -0.85
PDGFC-201ENST00000274071 AQP4P55087 323 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 AP2B1P63010 937 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 IL9RQ01113 521 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 BTKQ06187 659 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 TNIP1Q15025 636 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 PPP2R5BQ15173 497 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 NONOQ15233 471 aaKnown RBP eCLIP9.76□□□□□ -0.85
PDGFC-201ENST00000274071 DCAF6Q58WW2 860 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 SLC27A3Q5K4L6 730 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 DHRS4L2Q6PKH6 230 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 PAOXQ6QHF9 649 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 ARPINQ7Z6K5 226 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 ERI1Q8IV48 349 aaKnown RBP9.76□□□□□ -0.85
PDGFC-201ENST00000274071 TANGO6Q9C0B7 1094 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 UBN1Q9NPG3 1134 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 AASDHPPTQ9NRN7 309 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 DNAJB4Q9UDY4 337 aa9.76□□□□□ -0.85
PDGFC-201ENST00000274071 A0A087WZG4 1122 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 KLRF2D3W0D1 207 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 CNOT3O75175 753 aaKnown RBP9.75□□□□□ -0.85
PDGFC-201ENST00000274071 PTPN2P17706 415 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 GSSP48637 474 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 MXI1P50539 228 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 PTENP60484 403 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 PHKG1Q16816 387 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 PLEKHG4Q58EX7 1191 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 FBXL19Q6PCT2 694 aa9.75□□□□□ -0.85
PDGFC-201ENST00000274071 POTEHQ6S545 545 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms