RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 EHMT1Q9H9B1 1298 aa11.06□□□□□ -0.64
LRTM1-201ENST00000273286 SETD4Q9NVD3 440 aa11.06□□□□□ -0.64
LRTM1-201ENST00000273286 ERAP1Q9NZ08 941 aa11.06□□□□□ -0.64
LRTM1-201ENST00000273286 ADAMTS6Q9UKP5 1117 aa11.06□□□□□ -0.64
LRTM1-201ENST00000273286 KAT6AQ92794 2004 aa11.05□□□□□ -0.64
LRTM1-201ENST00000273286 CCDC69A6NI79 296 aa11.05□□□□□ -0.64
LRTM1-201ENST00000273286 MEIS2O14770 477 aa11.05□□□□□ -0.64
LRTM1-201ENST00000273286 SORBS3O60504 671 aa11.05□□□□□ -0.64
LRTM1-201ENST00000273286 RB1P06400 928 aa11.05□□□□□ -0.64
LRTM1-201ENST00000273286 RNASE1P07998 156 aaKnown RBP11.05□□□□□ -0.64
LRTM1-201ENST00000273286 TCF7P36402 384 aaPredicted RBP11.05□□□□□ -0.64
LRTM1-201ENST00000273286 ZNF507Q8TCN5 953 aa11.05□□□□□ -0.64
LRTM1-201ENST00000273286 LMBR1Q8WVP7 490 aa11.05□□□□□ -0.64
LRTM1-201ENST00000273286 SEPT1Q8WYJ6 367 aa11.05□□□□□ -0.64
LRTM1-201ENST00000273286 PLPPR2Q96GM1 343 aa11.05□□□□□ -0.64
LRTM1-201ENST00000273286 C17orf80Q9BSJ5 609 aa11.05□□□□□ -0.64
LRTM1-201ENST00000273286 PSTPIP2Q9H939 334 aa11.05□□□□□ -0.64
LRTM1-201ENST00000273286 LY9Q9HBG7 655 aa11.05□□□□□ -0.64
LRTM1-201ENST00000273286 MBNL3Q9NUK0 354 aaKnown RBP11.05□□□□□ -0.64
LRTM1-201ENST00000273286 RTEL1Q9NZ71 1219 aa11.05□□□□□ -0.64
LRTM1-201ENST00000273286 BIN1O00499 593 aa11.04□□□□□ -0.64
LRTM1-201ENST00000273286 PRPF40AO75400 957 aaKnown RBP11.04□□□□□ -0.64
LRTM1-201ENST00000273286 CTSHP09668 335 aa11.04□□□□□ -0.64
LRTM1-201ENST00000273286 KCNA5P22460 613 aa11.04□□□□□ -0.64
LRTM1-201ENST00000273286 ANTXR2P58335 489 aa11.04□□□□□ -0.64
LRTM1-201ENST00000273286 MTMR1Q13613 665 aa11.04□□□□□ -0.64
LRTM1-201ENST00000273286 USP17L6PQ6QN14 398 aa11.04□□□□□ -0.64
LRTM1-201ENST00000273286 TMEM192Q8IY95 271 aa11.04□□□□□ -0.64
LRTM1-201ENST00000273286 FIBCD1Q8N539 461 aa11.04□□□□□ -0.64
LRTM1-201ENST00000273286 IL17RAQ96F46 866 aa11.04□□□□□ -0.64
LRTM1-201ENST00000273286 C11orf84Q9BUA3 381 aaPredicted RBP11.04□□□□□ -0.64
LRTM1-201ENST00000273286 LMAN2LQ9H0V9 348 aa11.04□□□□□ -0.64
LRTM1-201ENST00000273286 SMARCAD1Q9H4L7 1026 aa11.04□□□□□ -0.64
LRTM1-201ENST00000273286 TUBE1Q9UJT0 475 aa11.04□□□□□ -0.64
LRTM1-201ENST00000273286 RBM8AQ9Y5S9 174 aaKnown RBP11.04□□□□□ -0.64
LRTM1-201ENST00000273286 SQORQ9Y6N5 450 aa11.04□□□□□ -0.64
LRTM1-201ENST00000273286 RALGAPA2Q2PPJ7 1873 aa11.04□□□□□ -0.64
LRTM1-201ENST00000273286 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.03□□□□□ -0.64
LRTM1-201ENST00000273286 RRN3P2A6NIE6 340 aa11.03□□□□□ -0.64
LRTM1-201ENST00000273286 C5orf67F2Z3F1 127 aa11.03□□□□□ -0.64
LRTM1-201ENST00000273286 PI4K2BG5E9Z4 385 aa11.03□□□□□ -0.64
LRTM1-201ENST00000273286 PRC1O43663 620 aa11.03□□□□□ -0.64
LRTM1-201ENST00000273286 LRIG2O94898 1065 aa11.03□□□□□ -0.64
LRTM1-201ENST00000273286 ALADP13716 330 aa11.03□□□□□ -0.64
LRTM1-201ENST00000273286 PPFIA1Q13136 1202 aa11.03□□□□□ -0.64
LRTM1-201ENST00000273286 GPM6BQ13491 265 aa11.03□□□□□ -0.64
LRTM1-201ENST00000273286 UTP14CQ5TAP6 766 aaKnown RBP11.03□□□□□ -0.64
LRTM1-201ENST00000273286 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.03□□□□□ -0.64
LRTM1-201ENST00000273286 HDXQ7Z353 690 aa11.03□□□□□ -0.64
LRTM1-201ENST00000273286 FAM178BQ8IXR5 827 aa11.03□□□□□ -0.64
LRTM1-201ENST00000273286 NEK9Q8TD19 979 aa11.03□□□□□ -0.64
LRTM1-201ENST00000273286 GLG1Q92896 1179 aa11.03□□□□□ -0.64
LRTM1-201ENST00000273286 PABPC5Q96DU9 382 aaKnown RBP11.03□□□□□ -0.64
LRTM1-201ENST00000273286 LRFN3Q9BTN0 628 aa11.03□□□□□ -0.64
LRTM1-201ENST00000273286 FTHL17Q9BXU8 183 aa11.03□□□□□ -0.64
LRTM1-201ENST00000273286 NSUN3Q9H649 340 aaKnown RBP11.03□□□□□ -0.64
LRTM1-201ENST00000273286 AZI2Q9H6S1 392 aa11.03□□□□□ -0.64
LRTM1-201ENST00000273286 PRKAG3Q9UGI9 489 aa11.03□□□□□ -0.64
LRTM1-201ENST00000273286 SNX11Q9Y5W9 270 aa11.03□□□□□ -0.64
LRTM1-201ENST00000273286 SLC12A7Q9Y666 1083 aa11.03□□□□□ -0.64
LRTM1-201ENST00000273286 MBLAC1A4D2B0 266 aaPredicted RBP11.02□□□□□ -0.64
LRTM1-201ENST00000273286 hCG_1984214I3L0E3 225 aa11.02□□□□□ -0.64
LRTM1-201ENST00000273286 M0QZ92 97 aa11.02□□□□□ -0.64
LRTM1-201ENST00000273286 SH2B2O14492 632 aaPredicted RBP11.02□□□□□ -0.64
LRTM1-201ENST00000273286 EOMESO95936 686 aa11.02□□□□□ -0.64
LRTM1-201ENST00000273286 KCNA2P16389 499 aa11.02□□□□□ -0.64
LRTM1-201ENST00000273286 SP4Q02446 784 aa11.02□□□□□ -0.64
LRTM1-201ENST00000273286 WIPI1Q5MNZ9 446 aaPredicted RBP11.02□□□□□ -0.64
LRTM1-201ENST00000273286 SYNE3Q6ZMZ3 975 aa11.02□□□□□ -0.64
LRTM1-201ENST00000273286 SPACA3Q8IXA5 215 aa11.02□□□□□ -0.64
LRTM1-201ENST00000273286 ZNF713Q8N859 430 aaPredicted RBP11.02□□□□□ -0.64
LRTM1-201ENST00000273286 PIBF1Q8WXW3 757 aa11.02□□□□□ -0.64
LRTM1-201ENST00000273286 PPP2R3CQ969Q6 453 aa11.02□□□□□ -0.64
LRTM1-201ENST00000273286 GLT8D2Q9H1C3 349 aa11.02□□□□□ -0.64
LRTM1-201ENST00000273286 EPHX3Q9H6B9 360 aa11.02□□□□□ -0.64
LRTM1-201ENST00000273286 BCAS3Q9H6U6 928 aa11.02□□□□□ -0.64
LRTM1-201ENST00000273286 FBRSQ9HAH7 460 aa11.02□□□□□ -0.64
LRTM1-201ENST00000273286 ADGRA3Q8IWK6 1321 aa11.02□□□□□ -0.65
LRTM1-201ENST00000273286 FOSP01100 380 aaPredicted RBP11.01□□□□□ -0.65
LRTM1-201ENST00000273286 CENPBP07199 599 aaPredicted RBP11.01□□□□□ -0.65
LRTM1-201ENST00000273286 CTNNB1P35222 781 aa11.01□□□□□ -0.65
LRTM1-201ENST00000273286 SLC26A2P50443 739 aa11.01□□□□□ -0.65
LRTM1-201ENST00000273286 TSHZ1Q6ZSZ6 1077 aa11.01□□□□□ -0.65
LRTM1-201ENST00000273286 SRBD1Q8N5C6 995 aaKnown RBP11.01□□□□□ -0.65
LRTM1-201ENST00000273286 LRRN4CLQ8ND94 238 aa11.01□□□□□ -0.65
LRTM1-201ENST00000273286 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.01□□□□□ -0.65
LRTM1-201ENST00000273286 JADE2Q9NQC1 790 aa11.01□□□□□ -0.65
LRTM1-201ENST00000273286 RBM28Q9NW13 759 aaKnown RBP11.01□□□□□ -0.65
LRTM1-201ENST00000273286 UBIAD1Q9Y5Z9 338 aa11.01□□□□□ -0.65
LRTM1-201ENST00000273286 TAF6LQ9Y6J9 622 aa11.01□□□□□ -0.65
LRTM1-201ENST00000273286 NLRC5Q86WI3 1866 aa11.01□□□□□ -0.65
LRTM1-201ENST00000273286 PRR33A8MZF0 331 aa11.01□□□□□ -0.65
LRTM1-201ENST00000273286 PLEKHA8P1O95397 391 aa11.01□□□□□ -0.65
LRTM1-201ENST00000273286 CHRNA1P02708 482 aa11.01□□□□□ -0.65
LRTM1-201ENST00000273286 GHRP10912 638 aa11.01□□□□□ -0.65
LRTM1-201ENST00000273286 BMPR1AP36894 532 aa11.01□□□□□ -0.65
LRTM1-201ENST00000273286 MGAT3Q09327 533 aa11.01□□□□□ -0.65
LRTM1-201ENST00000273286 NKPD1Q17RQ9 610 aa11.01□□□□□ -0.65
LRTM1-201ENST00000273286 NAALADL2Q58DX5 795 aa11.01□□□□□ -0.65
LRTM1-201ENST00000273286 FBXO47Q5MNV8 452 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms