RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 COLEC11Q9BWP8 271 aa9.9□□□□□ -0.82
TPM3-201ENST00000271850 TRIM6Q9C030 488 aaPredicted RBP9.9□□□□□ -0.82
TPM3-201ENST00000271850 MFSD1Q9H3U5 465 aa9.9□□□□□ -0.82
TPM3-201ENST00000271850 PLEKHA4Q9H4M7 779 aa9.9□□□□□ -0.82
TPM3-201ENST00000271850 ZDHHC7Q9NXF8 308 aa9.9□□□□□ -0.82
TPM3-201ENST00000271850 CA14Q9ULX7 337 aa9.9□□□□□ -0.82
TPM3-201ENST00000271850 NUMBLQ9Y6R0 609 aa9.9□□□□□ -0.82
TPM3-201ENST00000271850 TRIP11Q15643 1979 aa9.9□□□□□ -0.83
TPM3-201ENST00000271850 CACNA1IQ9P0X4 2223 aa9.89□□□□□ -0.83
TPM3-201ENST00000271850 SHISA7A6NL88 538 aa9.89□□□□□ -0.83
TPM3-201ENST00000271850 LRRN2O75325 713 aa9.89□□□□□ -0.83
TPM3-201ENST00000271850 C1RP00736 705 aa9.89□□□□□ -0.83
TPM3-201ENST00000271850 PRKCBP05771 671 aa9.89□□□□□ -0.83
TPM3-201ENST00000271850 SRFP11831 508 aa9.89□□□□□ -0.83
TPM3-201ENST00000271850 CYP11B2P19099 503 aa9.89□□□□□ -0.83
TPM3-201ENST00000271850 RPA1P27694 616 aa9.89□□□□□ -0.83
TPM3-201ENST00000271850 NEK4P51957 841 aa9.89□□□□□ -0.83
TPM3-201ENST00000271850 SOX4Q06945 474 aaPredicted RBP9.89□□□□□ -0.83
TPM3-201ENST00000271850 ANKRD1Q15327 319 aa9.89□□□□□ -0.83
TPM3-201ENST00000271850 ZNF174Q15697 407 aa9.89□□□□□ -0.83
TPM3-201ENST00000271850 GLRA4Q5JXX5 417 aa9.89□□□□□ -0.83
TPM3-201ENST00000271850 PADI6Q6TGC4 694 aa9.89□□□□□ -0.83
TPM3-201ENST00000271850 PARM1Q6UWI2 310 aa9.89□□□□□ -0.83
TPM3-201ENST00000271850 CYP26C1Q6V0L0 522 aa9.89□□□□□ -0.83
TPM3-201ENST00000271850 GRASPQ7Z6J2 395 aaPredicted RBP9.89□□□□□ -0.83
TPM3-201ENST00000271850 MAML2Q8IZL2 1156 aaPredicted RBP9.89□□□□□ -0.83
TPM3-201ENST00000271850 DAW1Q8N136 415 aa9.89□□□□□ -0.83
TPM3-201ENST00000271850 ITFG1Q8TB96 612 aa9.89□□□□□ -0.83
TPM3-201ENST00000271850 PIK3R5Q8WYR1 880 aa9.89□□□□□ -0.83
TPM3-201ENST00000271850 ZNF516Q92618 1163 aa9.89□□□□□ -0.83
TPM3-201ENST00000271850 ZNF775Q96BV0 537 aaPredicted RBP9.89□□□□□ -0.83
TPM3-201ENST00000271850 PPP1R10Q96QC0 940 aaKnown RBP9.89□□□□□ -0.83
TPM3-201ENST00000271850 KIF2CQ99661 725 aa9.89□□□□□ -0.83
TPM3-201ENST00000271850 FOXQ1Q9C009 403 aa9.89□□□□□ -0.83
TPM3-201ENST00000271850 IRF2BPLQ9H1B7 796 aa9.89□□□□□ -0.83
TPM3-201ENST00000271850 TBC1D17Q9HA65 648 aa9.89□□□□□ -0.83
TPM3-201ENST00000271850 GOLGA2P5Q9HBQ8 144 aa9.89□□□□□ -0.83
TPM3-201ENST00000271850 TUFT1Q9NNX1 390 aa9.89□□□□□ -0.83
TPM3-201ENST00000271850 PRMT7Q9NVM4 692 aaPredicted RBP9.89□□□□□ -0.83
TPM3-201ENST00000271850 HCFC1R1Q9NWW0 138 aa9.89□□□□□ -0.83
TPM3-201ENST00000271850 WNT16Q9UBV4 365 aa9.89□□□□□ -0.83
TPM3-201ENST00000271850 SSX2IPQ9Y2D8 614 aa9.89□□□□□ -0.83
TPM3-201ENST00000271850 MYH15Q9Y2K3 1946 aa9.89□□□□□ -0.83
TPM3-201ENST00000271850 SF3B1O75533 1304 aaKnown RBP eCLIP9.88□□□□□ -0.837e-7■■■■■ 108.6
TPM3-201ENST00000271850 ACKR2O00590 384 aa9.88□□□□□ -0.83
TPM3-201ENST00000271850 ABLIM1O14639 778 aa9.88□□□□□ -0.83
TPM3-201ENST00000271850 TADA2AO75478 443 aa9.88□□□□□ -0.83
TPM3-201ENST00000271850 DCNP07585 359 aaKnown RBP9.88□□□□□ -0.83
TPM3-201ENST00000271850 OR52Z1P0C646 297 aa9.88□□□□□ -0.83
TPM3-201ENST00000271850 FGFR3P22607 806 aa9.88□□□□□ -0.83
TPM3-201ENST00000271850 TOB1P50616 345 aaPredicted RBP9.88□□□□□ -0.83
TPM3-201ENST00000271850 PSMD5Q16401 504 aa9.88□□□□□ -0.83
TPM3-201ENST00000271850 IL17AQ16552 155 aa9.88□□□□□ -0.83
TPM3-201ENST00000271850 FAM171A1Q5VUB5 890 aa9.88□□□□□ -0.83
TPM3-201ENST00000271850 CCDC83Q8IWF9 413 aa9.88□□□□□ -0.83
TPM3-201ENST00000271850 MCPH1Q8NEM0 835 aa9.88□□□□□ -0.83
TPM3-201ENST00000271850 TATDN2Q93075 761 aa9.88□□□□□ -0.83
TPM3-201ENST00000271850 TTPALQ9BTX7 342 aa9.88□□□□□ -0.83
TPM3-201ENST00000271850 BRMS1Q9HCU9 246 aa9.88□□□□□ -0.83
TPM3-201ENST00000271850 PTPRHQ9HD43 1115 aa9.88□□□□□ -0.83
TPM3-201ENST00000271850 SLC2A4RGQ9NR83 387 aa9.88□□□□□ -0.83
TPM3-201ENST00000271850 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.88□□□□□ -0.83
TPM3-201ENST00000271850 FBXL21Q9UKT6 434 aa9.88□□□□□ -0.83
TPM3-201ENST00000271850 FANCMQ8IYD8 2048 aa9.88□□□□□ -0.83
TPM3-201ENST00000271850 PP2D1A8MPX8 630 aa9.87□□□□□ -0.83
TPM3-201ENST00000271850 TMEM189-UBE2V1I3L0A0 370 aa9.87□□□□□ -0.83
TPM3-201ENST00000271850 I3L4J1 428 aa9.87□□□□□ -0.83
TPM3-201ENST00000271850 N4BP3O15049 544 aa9.87□□□□□ -0.83
TPM3-201ENST00000271850 CCL16O15467 120 aa9.87□□□□□ -0.83
TPM3-201ENST00000271850 THP07101 528 aa9.87□□□□□ -0.83
TPM3-201ENST00000271850 C8AP07357 584 aa9.87□□□□□ -0.83
TPM3-201ENST00000271850 TKTP29401 623 aaKnown RBP9.87□□□□□ -0.83
TPM3-201ENST00000271850 NAMPTP43490 491 aa9.87□□□□□ -0.83
TPM3-201ENST00000271850 BRCC3P46736 316 aa9.87□□□□□ -0.83
TPM3-201ENST00000271850 CLCNKBP51801 687 aa9.87□□□□□ -0.83
TPM3-201ENST00000271850 GPC5P78333 572 aa9.87□□□□□ -0.83
TPM3-201ENST00000271850 MAPK7Q13164 816 aa9.87□□□□□ -0.83
TPM3-201ENST00000271850 PRPF4BQ13523 1007 aaKnown RBP9.87□□□□□ -0.83
TPM3-201ENST00000271850 SLC5A9Q2M3M2 681 aa9.87□□□□□ -0.83
TPM3-201ENST00000271850 XKR4Q5GH76 650 aa9.87□□□□□ -0.83
TPM3-201ENST00000271850 ALKAL1Q6UXT8 129 aa9.87□□□□□ -0.83
TPM3-201ENST00000271850 KCNK18Q7Z418 384 aa9.87□□□□□ -0.83
TPM3-201ENST00000271850 ADSSL1Q8N142 457 aa9.87□□□□□ -0.83
TPM3-201ENST00000271850 STAMQ92783 540 aa9.87□□□□□ -0.83
TPM3-201ENST00000271850 FGF13Q92913 245 aa9.87□□□□□ -0.83
TPM3-201ENST00000271850 NKD2Q969F2 451 aaPredicted RBP9.87□□□□□ -0.83
TPM3-201ENST00000271850 ZMAT2Q96NC0 199 aaKnown RBP9.87□□□□□ -0.83
TPM3-201ENST00000271850 NACC1Q96RE7 527 aa9.87□□□□□ -0.83
TPM3-201ENST00000271850 RTP3Q9BQQ7 232 aa9.87□□□□□ -0.83
TPM3-201ENST00000271850 MMTAG2Q9BU76 263 aaKnown RBP9.87□□□□□ -0.83
TPM3-201ENST00000271850 ARHGEF3Q9NR81 526 aa9.87□□□□□ -0.83
TPM3-201ENST00000271850 DNMT3BQ9UBC3 853 aaKnown RBP9.87□□□□□ -0.83
TPM3-201ENST00000271850 MTRRQ9UBK8 725 aa9.87□□□□□ -0.83
TPM3-201ENST00000271850 GDAQ9Y2T3 454 aa9.87□□□□□ -0.83
TPM3-201ENST00000271850 MTF2Q9Y483 593 aaPredicted RBP9.87□□□□□ -0.83
TPM3-201ENST00000271850 R4GN57 208 aa9.87□□□□□ -0.83
TPM3-201ENST00000271850 CEP250Q9BV73 2442 aa9.87□□□□□ -0.83
TPM3-201ENST00000271850 COL4A2P08572 1712 aa9.87□□□□□ -0.83
TPM3-201ENST00000271850 TBC1D4O60343 1298 aa9.86□□□□□ -0.83
TPM3-201ENST00000271850 NR1I2O75469 434 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms