RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 GPIHBP1Q8IV16 184 aa10.54□□□□□ -0.72
SNRNP40-201ENST00000263694 TAS1R2Q8TE23 839 aa10.54□□□□□ -0.72
SNRNP40-201ENST00000263694 CCDC51Q96ER9 411 aa10.54□□□□□ -0.72
SNRNP40-201ENST00000263694 ABHD8Q96I13 439 aa10.54□□□□□ -0.72
SNRNP40-201ENST00000263694 ZFP42Q96MM3 310 aa10.54□□□□□ -0.72
SNRNP40-201ENST00000263694 ZMAT2Q96NC0 199 aaKnown RBP10.54□□□□□ -0.72
SNRNP40-201ENST00000263694 ERGIC2Q96RQ1 377 aa10.54□□□□□ -0.72
SNRNP40-201ENST00000263694 LSM14BQ9BX40 385 aaKnown RBP10.54□□□□□ -0.72
SNRNP40-201ENST00000263694 MTMR12Q9C0I1 747 aa10.54□□□□□ -0.72
SNRNP40-201ENST00000263694 FAM207AQ9NSI2 230 aaPredicted RBP10.54□□□□□ -0.72
SNRNP40-201ENST00000263694 A0A1W2PQC6 194 aa10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 ENPP3O14638 875 aa10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 NOL4O94818 638 aa10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 IL18RAPO95256 599 aa10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 VNN1O95497 513 aa10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 TIMP1P01033 207 aa10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 CST3P01034 146 aaPredicted RBP10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 ITGA4P13612 1032 aa10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 CSF2RAP15509 400 aa10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 PON1P27169 355 aa10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 MXI1P50539 228 aa10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 CCDC173Q0VFZ6 552 aa10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 BIRC3Q13489 604 aa10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 EXOC3L4Q17RC7 722 aa10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 EPC2Q52LR7 807 aa10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 SPECC1LQ69YQ0 1117 aa10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 ALKAL1Q6UXT8 129 aa10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 GBP6Q6ZN66 633 aa10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 AGMOQ6ZNB7 445 aa10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 C15orf39Q6ZRI6 1047 aa10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 LMO3Q8TAP4 145 aa10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 C18orf25Q96B23 403 aaPredicted RBP10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 SNX27Q96L92 541 aa10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 PPP1R9BQ96SB3 815 aa10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 PI4K2AQ9BTU6 479 aa10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 TMEM8AQ9HCN3 771 aa10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 MIOSQ9NXC5 875 aa10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 GCNT4Q9P109 453 aa10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 AJAP1Q9UKB5 411 aaPredicted RBP10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 PDCD11Q14690 1871 aaKnown RBP10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 RALGAPA2Q2PPJ7 1873 aa10.53□□□□□ -0.72
SNRNP40-201ENST00000263694 A0A0U1RQF3 1178 aa10.52□□□□□ -0.72
SNRNP40-201ENST00000263694 CCDC85CA6NKD9 419 aa10.52□□□□□ -0.72
SNRNP40-201ENST00000263694 C9IYK1 514 aa10.52□□□□□ -0.72
SNRNP40-201ENST00000263694 KIAA0355O15063 1070 aa10.52□□□□□ -0.72
SNRNP40-201ENST00000263694 HLA-DRAP01903 254 aa10.52□□□□□ -0.72
SNRNP40-201ENST00000263694 CXCL10P02778 98 aa10.52□□□□□ -0.72
SNRNP40-201ENST00000263694 GYPCP04921 128 aa10.52□□□□□ -0.72
SNRNP40-201ENST00000263694 ACRP10323 421 aa10.52□□□□□ -0.72
SNRNP40-201ENST00000263694 RAG1P15918 1043 aa10.52□□□□□ -0.72
SNRNP40-201ENST00000263694 CAPN2P17655 700 aa10.52□□□□□ -0.72
SNRNP40-201ENST00000263694 CASP14P31944 242 aa10.52□□□□□ -0.72
SNRNP40-201ENST00000263694 FXR1P51114 621 aaKnown RBP eCLIP10.52□□□□□ -0.72
SNRNP40-201ENST00000263694 YARSP54577 528 aaKnown RBP10.52□□□□□ -0.72
SNRNP40-201ENST00000263694 ADKP55263 362 aaKnown RBP10.52□□□□□ -0.72
SNRNP40-201ENST00000263694 TBX2Q13207 712 aaPredicted RBP10.52□□□□□ -0.72
SNRNP40-201ENST00000263694 KYAT1Q16773 422 aa10.52□□□□□ -0.72
SNRNP40-201ENST00000263694 KRT39Q6A163 491 aa10.52□□□□□ -0.72
SNRNP40-201ENST00000263694 TRAPPC11Q7Z392 1133 aa10.52□□□□□ -0.72
SNRNP40-201ENST00000263694 CCDC186Q7Z3E2 898 aa10.52□□□□□ -0.72
SNRNP40-201ENST00000263694 MRPL10Q7Z7H8 261 aaKnown RBP10.52□□□□□ -0.72
SNRNP40-201ENST00000263694 ECHDC2Q86YB7 292 aa10.52□□□□□ -0.72
SNRNP40-201ENST00000263694 WDR49Q8IV35 697 aa10.52□□□□□ -0.72
SNRNP40-201ENST00000263694 C7orf61Q8IZ16 206 aa10.52□□□□□ -0.72
SNRNP40-201ENST00000263694 EHBP1Q8NDI1 1231 aa10.52□□□□□ -0.72
SNRNP40-201ENST00000263694 SEPT8Q92599 483 aa10.52□□□□□ -0.72
SNRNP40-201ENST00000263694 GAD1Q99259 594 aa10.52□□□□□ -0.72
SNRNP40-201ENST00000263694 INTS2Q9H0H0 1204 aaKnown RBP10.52□□□□□ -0.72
SNRNP40-201ENST00000263694 SIX2Q9NPC8 291 aa10.52□□□□□ -0.72
SNRNP40-201ENST00000263694 RGS18Q9NS28 235 aa10.52□□□□□ -0.72
SNRNP40-201ENST00000263694 CACNG4Q9UBN1 327 aa10.52□□□□□ -0.72
SNRNP40-201ENST00000263694 PLAGL2Q9UPG8 496 aa10.52□□□□□ -0.72
SNRNP40-201ENST00000263694 SMIM28A0A1B0GU29 152 aa10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 PTGESO14684 152 aa10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 STX10O60499 249 aa10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 ZNF623O75123 536 aa10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 PHACTR2O75167 634 aa10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 TMEM191BP0C7N4 346 aa10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 SYN1P17600 705 aa10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 GTF2H1P32780 548 aa10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 MLH1P40692 756 aa10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 HSP90AA2PQ14568 343 aaPredicted RBP10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 TMEM132DQ14C87 1099 aa10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 SURF1Q15526 300 aa10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 DUOXA2Q1HG44 320 aa10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 ZACNQ401N2 412 aa10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 SPOPLQ6IQ16 392 aa10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 PHLDB3Q6NSJ2 640 aa10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 TRIM65Q6PJ69 517 aa10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 SLC24A5Q71RS6 500 aa10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 USP37Q86T82 979 aa10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 ZNF598Q86UK7 904 aaKnown RBP10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 ARHGEF19Q8IW93 802 aa10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 FBXL13Q8NEE6 735 aa10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 NEK11Q8NG66 645 aa10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 TATDN2Q93075 761 aa10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 ZNF830Q96NB3 372 aaPredicted RBP10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 ASB7Q9H672 318 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms