RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 ABCC3O15438 1527 aa18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 MED14O60244 1454 aa18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 ORC4O43929 436 aa18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 TLR2O60603 784 aa18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 MDH1P40925 334 aaKnown RBP18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 NLRP11P59045 1033 aaKnown RBP18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 SNRNP48Q6IEG0 339 aaKnown RBP18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 LRIG3Q6UXM1 1119 aa18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 TTLL6Q8N841 843 aa18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 NPHS2Q9NP85 383 aa18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 GJB4Q9NTQ9 266 aa18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 NPHP4O75161 1426 aaPredicted RBP18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 GOLGA8TH3BQL2 631 aa18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 NFX1Q12986 1120 aaKnown RBP18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 AASDHQ4L235 1098 aaPredicted RBP18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 CIAPIN1Q6FI81 312 aa18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 FAM129AQ9BZQ8 928 aa18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 EHD2Q9NZN4 543 aa18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 TJP2Q9UDY2 1190 aa18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 MAP4P27816 1152 aaKnown RBP18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 UGP2Q16851 508 aa18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 SGMS1Q86VZ5 419 aa18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 PCYOX1LQ8NBM8 494 aa18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 SENP7Q9BQF6 1050 aa18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 USP15Q9Y4E8 981 aaPredicted RBP18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 PRAMEF22A3QJZ6 481 aa18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 DEFA1P59665 94 aa18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 DEFA3P59666 94 aa18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 APOBEC3FQ8IUX4 373 aaKnown RBP18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 RIBC1Q8N443 379 aaPredicted RBP18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 JPH1Q9HDC5 661 aaPredicted RBP18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 FAM47DPA6NHR8 397 aa18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 NCK2O43639 380 aa18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 EFNA5P52803 228 aa18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 ZFYVE19Q96K21 471 aa18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 ADNPQ9H2P0 1102 aa18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 KCND2Q9NZV8 630 aa18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 POLIQ9UNA4 740 aa18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 C16orf96A6NNT2 1141 aa18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 PDIA5Q14554 519 aa18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 B4GALNT2Q8NHY0 566 aa18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 TNIP3Q96KP6 325 aa18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 ZNF556Q9HAH1 456 aa18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 PSMC3IPQ9P2W1 217 aaPredicted RBP18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 ALKQ9UM73 1620 aa18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 CDK17Q00537 523 aa18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 PLD3Q8IV08 490 aa18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 AGPAT1Q99943 283 aa18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 MAP3K20Q9NYL2 800 aaKnown RBP18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 SELENONQ9NZV5 590 aa18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 H7C1W4 665 aa18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 YWHABP31946 246 aaKnown RBP18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 ALDH18A1P54886 795 aaKnown RBP18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 C1orf54Q8WWF1 131 aa18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 APEX2Q9UBZ4 518 aa18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 MINPP1Q9UNW1 487 aa18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 MYO18AQ92614 2054 aaKnown RBP18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 SUPT3HO75486 399 aa18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 ZNF560Q96MR9 790 aa18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 GABBR1Q9UBS5 961 aa18.38■□□□□ 0.53
NOTCH3-201ENST00000263388 ADCK1Q86TW2 530 aa18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 AGGF1Q8N302 714 aaeCLIP18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 PXDNLA1KZ92 1463 aa18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 CUL3Q13618 768 aa18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 ZNF235Q14590 738 aa18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 LRRC14Q15048 493 aa18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 PDXKO00764 312 aa18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 EIF3HO15372 352 aaKnown RBP eCLIP18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 ENO1P06733 434 aaKnown RBP18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 VCPP55072 806 aaKnown RBP18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 AARS2Q5JTZ9 985 aaKnown RBP18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 TEKT4Q8WW24 435 aa18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 C18orf8Q96DM3 657 aa18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 GOLGA8RI6L899 631 aa18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 SCP2P22307 547 aa18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 ARHGEF1Q92888 912 aaKnown RBP18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 ARHGEF26Q96DR7 871 aa18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 UVRAGQ9P2Y5 699 aa18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 ATXN8OSP0DMR3 200 aa18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 KDSRQ06136 332 aa18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 PIGBQ92521 554 aa18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 STMN3Q9NZ72 180 aa18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 TMEM94Q12767 1356 aa18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 LZTS3O60299 673 aaPredicted RBP18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 ACTN3Q08043 901 aaPredicted RBP18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 DCP1AQ9NPI6 582 aaPredicted RBP18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 TPI1P60174 286 aa18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 ZNF280CQ8ND82 737 aa18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 QTRT2Q9H974 415 aaKnown RBP18.37■□□□□ 0.53
NOTCH3-201ENST00000263388 RALAP11233 206 aa18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 ACTR2P61160 394 aa18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 CCT8L2Q96SF2 557 aa18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 SPAG6O75602 509 aa18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 PPP1R37O75864 691 aa18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 IRX1P78414 480 aaPredicted RBP18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 CASS4Q9NQ75 786 aa18.36■□□□□ 0.53
NOTCH3-201ENST00000263388 HERC5Q9UII4 1024 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms