RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 TNNI1P19237 187 aa29.76■■■□□ 2.35
SMARCD3-201ENST00000262188 KLK7P49862 253 aa29.76■■■□□ 2.35
SMARCD3-201ENST00000262188 UBXN1Q04323 297 aa29.76■■■□□ 2.35
SMARCD3-201ENST00000262188 DPF3Q92784 378 aa29.76■■■□□ 2.35
SMARCD3-201ENST00000262188 ZMAT2Q96NC0 199 aaKnown RBP29.76■■■□□ 2.35
SMARCD3-201ENST00000262188 CRACR2AQ9BSW2 395 aa29.76■■■□□ 2.35
SMARCD3-201ENST00000262188 UTP3Q9NQZ2 479 aaKnown RBP eCLIP29.76■■■□□ 2.35
SMARCD3-201ENST00000262188 CITO14578 2027 aa29.76■■■□□ 2.35
SMARCD3-201ENST00000262188 CLGNO14967 610 aa29.75■■■□□ 2.35
SMARCD3-201ENST00000262188 AFPP02771 609 aaKnown RBP29.75■■■□□ 2.35
SMARCD3-201ENST00000262188 JADE1Q6IE81 842 aa29.75■■■□□ 2.35
SMARCD3-201ENST00000262188 AGMOQ6ZNB7 445 aa29.75■■■□□ 2.35
SMARCD3-201ENST00000262188 ECHDC2Q86YB7 292 aa29.75■■■□□ 2.35
SMARCD3-201ENST00000262188 TMC2Q8TDI7 906 aa29.75■■■□□ 2.35
SMARCD3-201ENST00000262188 SNX27Q96L92 541 aa29.75■■■□□ 2.35
SMARCD3-201ENST00000262188 RNF216Q9NWF9 866 aaPredicted RBP29.75■■■□□ 2.35
SMARCD3-201ENST00000262188 LOC101059915A0A1B0GWI6 518 aaPredicted RBP29.75■■■□□ 2.35
SMARCD3-201ENST00000262188 ITGA4P13612 1032 aa29.74■■■□□ 2.35
SMARCD3-201ENST00000262188 GUCY2FP51841 1108 aa29.74■■■□□ 2.35
SMARCD3-201ENST00000262188 APBA1Q02410 837 aa29.74■■■□□ 2.35
SMARCD3-201ENST00000262188 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.74■■■□□ 2.35
SMARCD3-201ENST00000262188 TMEM199Q8N511 208 aa29.74■■■□□ 2.35
SMARCD3-201ENST00000262188 HTATIP2Q9BUP3 242 aa29.74■■■□□ 2.35
SMARCD3-201ENST00000262188 TMEM117Q9H0C3 514 aa29.74■■■□□ 2.35
SMARCD3-201ENST00000262188 SPDYE4A6NLX3 237 aa29.73■■■□□ 2.35
SMARCD3-201ENST00000262188 PARNO95453 639 aaKnown RBP29.73■■■□□ 2.35
SMARCD3-201ENST00000262188 MLH1P40692 756 aa29.73■■■□□ 2.35
SMARCD3-201ENST00000262188 FMO5P49326 533 aa29.73■■■□□ 2.35
SMARCD3-201ENST00000262188 YARSP54577 528 aaKnown RBP29.73■■■□□ 2.35
SMARCD3-201ENST00000262188 TFAMQ00059 246 aaKnown RBP29.73■■■□□ 2.35
SMARCD3-201ENST00000262188 PPP2R3AQ06190 1150 aa29.73■■■□□ 2.35
SMARCD3-201ENST00000262188 FILIP1LQ4L180 1135 aa29.73■■■□□ 2.35
SMARCD3-201ENST00000262188 SLC24A5Q71RS6 500 aa29.73■■■□□ 2.35
SMARCD3-201ENST00000262188 GAD1Q99259 594 aa29.73■■■□□ 2.35
SMARCD3-201ENST00000262188 CGRRF1Q99675 332 aa29.73■■■□□ 2.35
SMARCD3-201ENST00000262188 TRAIPQ9BWF2 469 aa29.73■■■□□ 2.35
SMARCD3-201ENST00000262188 FTHL17Q9BXU8 183 aa29.73■■■□□ 2.35
SMARCD3-201ENST00000262188 MTMR12Q9C0I1 747 aa29.73■■■□□ 2.35
SMARCD3-201ENST00000262188 PLAGL2Q9UPG8 496 aa29.73■■■□□ 2.35
SMARCD3-201ENST00000262188 MRPL10Q7Z7H8 261 aaKnown RBP29.73■■■□□ 2.35
SMARCD3-201ENST00000262188 APBB2Q92870 758 aa29.73■■■□□ 2.35
SMARCD3-201ENST00000262188 EPHB4P54760 987 aa29.72■■■□□ 2.35
SMARCD3-201ENST00000262188 KYAT1Q16773 422 aa29.72■■■□□ 2.35
SMARCD3-201ENST00000262188 C16orf59Q7L2K0 433 aa29.72■■■□□ 2.35
SMARCD3-201ENST00000262188 ZNF598Q86UK7 904 aaKnown RBP29.72■■■□□ 2.35
SMARCD3-201ENST00000262188 ZNF623O75123 536 aa29.72■■■□□ 2.35
SMARCD3-201ENST00000262188 FGFR1P11362 822 aa29.72■■■□□ 2.35
SMARCD3-201ENST00000262188 RAB27AP51159 221 aa29.72■■■□□ 2.35
SMARCD3-201ENST00000262188 CNKSR3Q6P9H4 555 aa29.72■■■□□ 2.35
SMARCD3-201ENST00000262188 ALKAL1Q6UXT8 129 aa29.72■■■□□ 2.35
SMARCD3-201ENST00000262188 SV2AQ7L0J3 742 aa29.72■■■□□ 2.35
SMARCD3-201ENST00000262188 TMCO2Q7Z6W1 182 aaPredicted RBP29.72■■■□□ 2.35
SMARCD3-201ENST00000262188 MIOSQ9NXC5 875 aa29.72■■■□□ 2.35
SMARCD3-201ENST00000262188 RFC2P35250 354 aa29.71■■■□□ 2.35
SMARCD3-201ENST00000262188 CLDN10P78369 228 aa29.71■■■□□ 2.35
SMARCD3-201ENST00000262188 TDRD10Q5VZ19 366 aaKnown RBP29.71■■■□□ 2.35
SMARCD3-201ENST00000262188 C18orf25Q96B23 403 aaPredicted RBP29.71■■■□□ 2.35
SMARCD3-201ENST00000262188 KIF12Q96FN5 646 aa29.71■■■□□ 2.35
SMARCD3-201ENST00000262188 LAMA2P24043 3122 aaKnown RBP29.7■■■□□ 2.35
SMARCD3-201ENST00000262188 IL18RAPO95256 599 aa29.7■■■□□ 2.35
SMARCD3-201ENST00000262188 GATMP50440 423 aa29.7■■■□□ 2.35
SMARCD3-201ENST00000262188 MCCD1P59942 119 aaPredicted RBP29.7■■■□□ 2.35
SMARCD3-201ENST00000262188 MYL7Q01449 175 aa29.7■■■□□ 2.35
SMARCD3-201ENST00000262188 KCNMA1Q12791 1236 aa29.7■■■□□ 2.35
SMARCD3-201ENST00000262188 INPP5FQ9Y2H2 1132 aa29.7■■■□□ 2.35
SMARCD3-201ENST00000262188 MICAL3Q7RTP6 2002 aa29.7■■■□□ 2.34
SMARCD3-201ENST00000262188 PTGESO14684 152 aa29.7■■■□□ 2.34
SMARCD3-201ENST00000262188 CBFA2T2O43439 604 aa29.7■■■□□ 2.34
SMARCD3-201ENST00000262188 TPM3P06753 285 aa29.7■■■□□ 2.34
SMARCD3-201ENST00000262188 MXI1P50539 228 aa29.7■■■□□ 2.34
SMARCD3-201ENST00000262188 FAM189BP81408 668 aa29.7■■■□□ 2.34
SMARCD3-201ENST00000262188 TERF2Q15554 542 aa29.7■■■□□ 2.34
SMARCD3-201ENST00000262188 OTOP2Q7RTS6 562 aa29.7■■■□□ 2.34
SMARCD3-201ENST00000262188 WDR49Q8IV35 697 aa29.7■■■□□ 2.34
SMARCD3-201ENST00000262188 GSTCDQ8NEC7 633 aa29.7■■■□□ 2.34
SMARCD3-201ENST00000262188 CACNG4Q9UBN1 327 aa29.7■■■□□ 2.34
SMARCD3-201ENST00000262188 TUBGCP4Q9UGJ1 667 aa29.7■■■□□ 2.34
SMARCD3-201ENST00000262188 LTBP2Q14767 1821 aa29.69■■■□□ 2.34
SMARCD3-201ENST00000262188 ARL5CA6NH57 179 aa29.69■■■□□ 2.34
SMARCD3-201ENST00000262188 C4BPAP04003 597 aaKnown RBP29.69■■■□□ 2.34
SMARCD3-201ENST00000262188 IKBKEQ14164 716 aa29.69■■■□□ 2.34
SMARCD3-201ENST00000262188 FKBP15Q5T1M5 1219 aa29.69■■■□□ 2.34
SMARCD3-201ENST00000262188 TAS1R2Q8TE23 839 aa29.69■■■□□ 2.34
SMARCD3-201ENST00000262188 SEMA4DQ92854 862 aa29.69■■■□□ 2.34
SMARCD3-201ENST00000262188 CNTN3Q9P232 1028 aa29.69■■■□□ 2.34
SMARCD3-201ENST00000262188 SMIM28A0A1B0GU29 152 aa29.68■■■□□ 2.34
SMARCD3-201ENST00000262188 ACTN1P12814 892 aa29.68■■■□□ 2.34
SMARCD3-201ENST00000262188 SLC9A1P19634 815 aa29.68■■■□□ 2.34
SMARCD3-201ENST00000262188 BIRC3Q13489 604 aa29.68■■■□□ 2.34
SMARCD3-201ENST00000262188 TMEM132DQ14C87 1099 aa29.68■■■□□ 2.34
SMARCD3-201ENST00000262188 SPC24Q8NBT2 197 aa29.68■■■□□ 2.34
SMARCD3-201ENST00000262188 HELQQ8TDG4 1101 aa29.68■■■□□ 2.34
SMARCD3-201ENST00000262188 ASB7Q9H672 318 aa29.68■■■□□ 2.34
SMARCD3-201ENST00000262188 RSAD1Q9HA92 442 aa29.68■■■□□ 2.34
SMARCD3-201ENST00000262188 GOLGA2P5Q9HBQ8 144 aa29.68■■■□□ 2.34
SMARCD3-201ENST00000262188 TMEM8AQ9HCN3 771 aa29.68■■■□□ 2.34
SMARCD3-201ENST00000262188 IL23AQ9NPF7 189 aa29.68■■■□□ 2.34
SMARCD3-201ENST00000262188 RALGAPA2Q2PPJ7 1873 aa29.68■■■□□ 2.34
SMARCD3-201ENST00000262188 UPP2O95045 317 aa29.68■■■□□ 2.34
SMARCD3-201ENST00000262188 PBX1P40424 430 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms