RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 BECN2A8MW95 431 aa12.61□□□□□ -0.39
PFDN1-201ENST00000261813 INPPL1O15357 1258 aa12.61□□□□□ -0.39
PFDN1-201ENST00000261813 MEFVO15553 781 aaPredicted RBP12.61□□□□□ -0.39
PFDN1-201ENST00000261813 RECQL4O94761 1208 aa12.61□□□□□ -0.39
PFDN1-201ENST00000261813 ADSSP30520 456 aa12.61□□□□□ -0.39
PFDN1-201ENST00000261813 OSTNP61366 133 aa12.61□□□□□ -0.39
PFDN1-201ENST00000261813 UVSSAQ2YD98 709 aa12.61□□□□□ -0.39
PFDN1-201ENST00000261813 NOMO2Q5JPE7 1267 aa12.61□□□□□ -0.39
PFDN1-201ENST00000261813 ZBTB41Q5SVQ8 909 aa12.61□□□□□ -0.39
PFDN1-201ENST00000261813 GLB1LQ6UWU2 654 aa12.61□□□□□ -0.39
PFDN1-201ENST00000261813 APBB1IPQ7Z5R6 666 aaPredicted RBP12.61□□□□□ -0.39
PFDN1-201ENST00000261813 NELFCDQ8IXH7 590 aa12.61□□□□□ -0.39
PFDN1-201ENST00000261813 HACE1Q8IYU2 909 aa12.61□□□□□ -0.39
PFDN1-201ENST00000261813 SYCP3Q8IZU3 236 aa12.61□□□□□ -0.39
PFDN1-201ENST00000261813 GSTCDQ8NEC7 633 aa12.61□□□□□ -0.39
PFDN1-201ENST00000261813 DHTKD1Q96HY7 919 aaPredicted RBP12.61□□□□□ -0.39
PFDN1-201ENST00000261813 ZFP42Q96MM3 310 aa12.61□□□□□ -0.39
PFDN1-201ENST00000261813 GAD1Q99259 594 aa12.61□□□□□ -0.39
PFDN1-201ENST00000261813 C17orf80Q9BSJ5 609 aa12.61□□□□□ -0.39
PFDN1-201ENST00000261813 CWH43Q9H720 699 aa12.61□□□□□ -0.39
PFDN1-201ENST00000261813 UBN1Q9NPG3 1134 aa12.61□□□□□ -0.39
PFDN1-201ENST00000261813 TYW1Q9NV66 732 aaKnown RBP12.61□□□□□ -0.39
PFDN1-201ENST00000261813 MIOSQ9NXC5 875 aa12.61□□□□□ -0.39
PFDN1-201ENST00000261813 PARP2Q9UGN5 583 aa12.61□□□□□ -0.39
PFDN1-201ENST00000261813 ARL5CA6NH57 179 aa12.6□□□□□ -0.39
PFDN1-201ENST00000261813 GOLGA6L19H0YKK7 550 aa12.6□□□□□ -0.39
PFDN1-201ENST00000261813 PSMA7O14818 248 aa12.6□□□□□ -0.39
PFDN1-201ENST00000261813 TGFB1I1O43294 461 aa12.6□□□□□ -0.39
PFDN1-201ENST00000261813 B4GALT3O60512 393 aa12.6□□□□□ -0.39
PFDN1-201ENST00000261813 RNF40O75150 1001 aa12.6□□□□□ -0.39
PFDN1-201ENST00000261813 TNFSF9P41273 254 aa12.6□□□□□ -0.39
PFDN1-201ENST00000261813 MATR3P43243 847 aaKnown RBP eCLIP12.6□□□□□ -0.396e-8■■■□□ 18.9
PFDN1-201ENST00000261813 SCNN1GP51170 649 aa12.6□□□□□ -0.39
PFDN1-201ENST00000261813 LRRC43Q8N309 656 aa12.6□□□□□ -0.39
PFDN1-201ENST00000261813 CLP1Q92989 425 aaKnown RBP12.6□□□□□ -0.39
PFDN1-201ENST00000261813 MSTO1Q9BUK6 570 aa12.6□□□□□ -0.39
PFDN1-201ENST00000261813 DNAJC25Q9H1X3 360 aa12.6□□□□□ -0.39
PFDN1-201ENST00000261813 ZNF576Q9H609 170 aa12.6□□□□□ -0.39
PFDN1-201ENST00000261813 CERS4Q9HA82 394 aa12.6□□□□□ -0.39
PFDN1-201ENST00000261813 TBC1D13Q9NVG8 400 aa12.6□□□□□ -0.39
PFDN1-201ENST00000261813 BICDL2A1A5D9 508 aa12.59□□□□□ -0.39
PFDN1-201ENST00000261813 EPOPA6NHQ4 379 aa12.59□□□□□ -0.39
PFDN1-201ENST00000261813 IKBKBO14920 756 aa12.59□□□□□ -0.39
PFDN1-201ENST00000261813 OGTO15294 1046 aa12.59□□□□□ -0.39
PFDN1-201ENST00000261813 POMCP01189 267 aa12.59□□□□□ -0.39
PFDN1-201ENST00000261813 MRE11P49959 708 aa12.59□□□□□ -0.39
PFDN1-201ENST00000261813 ERVK-21P61565 698 aa12.59□□□□□ -0.39
PFDN1-201ENST00000261813 KNOP1Q1ED39 458 aaKnown RBP12.59□□□□□ -0.39
PFDN1-201ENST00000261813 DPCR1Q3MIW9 517 aa12.59□□□□□ -0.39
PFDN1-201ENST00000261813 TJAP1Q5JTD0 557 aa12.59□□□□□ -0.39
PFDN1-201ENST00000261813 SLFN12LQ6IEE8 588 aa12.59□□□□□ -0.39
PFDN1-201ENST00000261813 FOXR2Q6PJQ5 311 aa12.59□□□□□ -0.39
PFDN1-201ENST00000261813 SMYD4Q8IYR2 804 aaPredicted RBP12.59□□□□□ -0.39
PFDN1-201ENST00000261813 ZSWIM2Q8NEG5 633 aa12.59□□□□□ -0.39
PFDN1-201ENST00000261813 RSPH1Q8WYR4 309 aa12.59□□□□□ -0.39
PFDN1-201ENST00000261813 POMGNT1Q8WZA1 660 aa12.59□□□□□ -0.39
PFDN1-201ENST00000261813 TGS1Q96RS0 853 aaKnown RBP12.59□□□□□ -0.39
PFDN1-201ENST00000261813 CBWD1Q9BRT8 395 aa12.59□□□□□ -0.39
PFDN1-201ENST00000261813 CCDC94Q9BW85 323 aaPredicted RBP12.59□□□□□ -0.39
PFDN1-201ENST00000261813 MRPL9Q9BYD2 267 aaKnown RBP12.59□□□□□ -0.39
PFDN1-201ENST00000261813 GBP3Q9H0R5 595 aa12.59□□□□□ -0.39
PFDN1-201ENST00000261813 MTUS1Q9ULD2 1270 aa12.59□□□□□ -0.39
PFDN1-201ENST00000261813 PLAGL2Q9UPG8 496 aa12.59□□□□□ -0.39
PFDN1-201ENST00000261813 MAPK8IP1Q9UQF2 711 aa12.59□□□□□ -0.39
PFDN1-201ENST00000261813 KIAA1671Q9BY89 1806 aa12.59□□□□□ -0.39
PFDN1-201ENST00000261813 VCANP13611 3396 aa12.59□□□□□ -0.39
PFDN1-201ENST00000261813 PTGESO14684 152 aa12.58□□□□□ -0.4
PFDN1-201ENST00000261813 DDHD2O94830 711 aa12.58□□□□□ -0.4
PFDN1-201ENST00000261813 CXCL8P10145 99 aa12.58□□□□□ -0.4
PFDN1-201ENST00000261813 GARTP22102 1010 aa12.58□□□□□ -0.4
PFDN1-201ENST00000261813 SLC10A6Q3KNW5 377 aa12.58□□□□□ -0.4
PFDN1-201ENST00000261813 XKR4Q5GH76 650 aa12.58□□□□□ -0.4
PFDN1-201ENST00000261813 ISM2Q6H9L7 571 aa12.58□□□□□ -0.4
PFDN1-201ENST00000261813 ARMCX5Q6P1M9 558 aa12.58□□□□□ -0.4
PFDN1-201ENST00000261813 CRELD2Q6UXH1 353 aaPredicted RBP12.58□□□□□ -0.4
PFDN1-201ENST00000261813 ALKAL1Q6UXT8 129 aa12.58□□□□□ -0.4
PFDN1-201ENST00000261813 ZNF280BQ86YH2 543 aa12.58□□□□□ -0.4
PFDN1-201ENST00000261813 ADSSL1Q8N142 457 aa12.58□□□□□ -0.4
PFDN1-201ENST00000261813 GUF1Q8N442 669 aaKnown RBP12.58□□□□□ -0.4
PFDN1-201ENST00000261813 ENOX1Q8TC92 643 aaKnown RBP12.58□□□□□ -0.4
PFDN1-201ENST00000261813 URGCPQ8TCY9 931 aa12.58□□□□□ -0.4
PFDN1-201ENST00000261813 ARNTL2Q8WYA1 636 aa12.58□□□□□ -0.4
PFDN1-201ENST00000261813 SAAL1Q96ER3 474 aa12.58□□□□□ -0.4
PFDN1-201ENST00000261813 SNX27Q96L92 541 aa12.58□□□□□ -0.4
PFDN1-201ENST00000261813 ACAP3Q96P50 834 aa12.58□□□□□ -0.4
PFDN1-201ENST00000261813 KCTD10Q9H3F6 313 aa12.58□□□□□ -0.4
PFDN1-201ENST00000261813 PCIF1Q9H4Z3 704 aa12.58□□□□□ -0.4
PFDN1-201ENST00000261813 NRDE2Q9H7Z3 1164 aa12.58□□□□□ -0.4
PFDN1-201ENST00000261813 AGPAT3Q9NRZ7 376 aa12.58□□□□□ -0.4
PFDN1-201ENST00000261813 KANSL3Q9P2N6 904 aa12.58□□□□□ -0.4
PFDN1-201ENST00000261813 CPSF3Q9UKF6 684 aaKnown RBP12.58□□□□□ -0.4
PFDN1-201ENST00000261813 AGO2Q9UKV8 859 aaKnown RBP12.58□□□□□ -0.4
PFDN1-201ENST00000261813 CDH23Q9H251 3354 aa12.58□□□□□ -0.4
PFDN1-201ENST00000261813 EYSQ5T1H1 3165 aa12.57□□□□□ -0.4
PFDN1-201ENST00000261813 FSD2A1L4K1 749 aa12.57□□□□□ -0.4
PFDN1-201ENST00000261813 CLIC2O15247 247 aa12.57□□□□□ -0.4
PFDN1-201ENST00000261813 FGFR1OPO95684 399 aaKnown RBP12.57□□□□□ -0.4
PFDN1-201ENST00000261813 CLTAP09496 248 aa12.57□□□□□ -0.4
PFDN1-201ENST00000261813 BMP6P22004 513 aa12.57□□□□□ -0.4
PFDN1-201ENST00000261813 CTNNB1P35222 781 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms