RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 RMND5BQ96G75 393 aaPredicted RBP8.78□□□□□ -1
SNCAIP-201ENST00000261367 ZBED2Q9BTP6 218 aa8.78□□□□□ -1
SNCAIP-201ENST00000261367 EBF2Q9HAK2 575 aa8.78□□□□□ -1
SNCAIP-201ENST00000261367 GPAMQ9HCL2 828 aa8.78□□□□□ -1
SNCAIP-201ENST00000261367 STRCP1A6NGW2 1772 aa8.78□□□□□ -1
SNCAIP-201ENST00000261367 DLGAP3O95886 979 aa8.78□□□□□ -1
SNCAIP-201ENST00000261367 PDE6AP16499 860 aa8.78□□□□□ -1
SNCAIP-201ENST00000261367 DRD4P21917 467 aa8.78□□□□□ -1
SNCAIP-201ENST00000261367 ATP2C1P98194 919 aaPredicted RBP8.78□□□□□ -1
SNCAIP-201ENST00000261367 KDSRQ06136 332 aa8.78□□□□□ -1
SNCAIP-201ENST00000261367 ZNF844Q08AG5 666 aa8.78□□□□□ -1
SNCAIP-201ENST00000261367 TFDP2Q14188 446 aa8.78□□□□□ -1
SNCAIP-201ENST00000261367 MYBPC2Q14324 1141 aa8.78□□□□□ -1
SNCAIP-201ENST00000261367 PPP2R5DQ14738 602 aa8.78□□□□□ -1
SNCAIP-201ENST00000261367 PLEKHA7Q6IQ23 1121 aa8.78□□□□□ -1
SNCAIP-201ENST00000261367 HDAC11Q96DB2 347 aa8.78□□□□□ -1
SNCAIP-201ENST00000261367 EYA1Q99502 592 aa8.78□□□□□ -1
SNCAIP-201ENST00000261367 ZNF277Q9NRM2 450 aaPredicted RBP8.78□□□□□ -1
SNCAIP-201ENST00000261367 RRN3Q9NYV6 651 aa8.78□□□□□ -1
SNCAIP-201ENST00000261367 STOML2Q9UJZ1 356 aa8.78□□□□□ -1
SNCAIP-201ENST00000261367 LMO7Q8WWI1 1683 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 TRIM49P0CI25 452 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 TRIM49CP0CI26 452 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 THRAP10827 490 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 ZNF18P17022 549 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 PLCG1P19174 1290 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 TIMM10P62072 90 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 MAPK7Q13164 816 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 MTA1Q13330 715 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 OASLQ15646 514 aaKnown RBP8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 HP1BP3Q5SSJ5 553 aaPredicted RBP8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 PRR23CQ6ZRP0 262 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 MIGA2Q7L4E1 593 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 ENOSF1Q7L5Y1 443 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 QKIQ96PU8 341 aaKnown RBP eCLIP8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 PAIP1Q9H074 479 aaKnown RBP8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 LRMDAQ9H2I8 198 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 TBC1D7Q9P0N9 293 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 WDR35Q9P2L0 1181 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 MBD2Q9UBB5 411 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 ARHGEF37A1IGU5 675 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 TMEM191CA6NGB0 347 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 GUCY1B2O75343 617 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 WDR47O94967 919 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 TMEM191BP0C7N4 346 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 KCNA2P16389 499 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 SP100P23497 879 aaPredicted RBP8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 EXOSC10Q01780 885 aaKnown RBP8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 SLC29A2Q14542 456 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 KIF22Q14807 665 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 PRPF39Q86UA1 669 aaKnown RBP8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 SGMS1Q86VZ5 419 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 FAM178BQ8IXR5 827 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 EML4Q9HC35 981 aaKnown RBP8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 GIN1Q9NXP7 522 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 ADA2Q9NZK5 511 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 SETD1BQ9UPS6 1966 aaKnown RBP8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 ZAP70P43403 619 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 ERVK-24P63145 666 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 ZNF268Q14587 947 aaPredicted RBP8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 PRR23BQ6ZRT6 265 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 PCYOX1LQ8NBM8 494 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 OR2W6PQ8NHA6 318 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 WDR12Q9GZL7 423 aaKnown RBP8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 C8orf4Q9NR00 106 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 DDX25Q9UHL0 483 aaKnown RBP8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 GDAQ9Y2T3 454 aa8.77□□□□□ -1.01
SNCAIP-201ENST00000261367 PJA2O43164 708 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 ATP6V1B1P15313 513 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 NAALADL2Q58DX5 795 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 CDKAL1Q5VV42 579 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 ZNF804AQ7Z570 1209 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 RHOT1Q8IXI2 618 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 SUN5Q8TC36 379 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 CCSER1Q9C0I3 900 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 FANCEQ9HB96 536 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 HPSEQ9Y251 543 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 SOX6P35712 828 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 IL12RB1P42701 662 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 RUNX1T1Q06455 604 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 KCNMA1Q12791 1236 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 EPS8Q12929 822 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 COL9A3Q14050 684 aaPredicted RBP8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 TRIP13Q15645 432 aaPredicted RBP8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 HIF1AQ16665 826 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 DGUOKQ16854 277 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 TOM1L2Q6ZVM7 507 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 DCAF5Q96JK2 942 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 ACCSQ96QU6 501 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 ZBTB18Q99592 522 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 GGT7Q9UJ14 662 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 CCDC78A2IDD5 438 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 ALX1Q15699 326 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 LONRF1Q17RB8 773 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 LIN52Q52LA3 116 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 ARMCX4Q5H9R4 360 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 RSBN1Q5VWQ0 802 aaPredicted RBP8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 NEK10Q6ZWH5 1172 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 MB21D2Q8IYB1 491 aaPredicted RBP8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 KCTD17Q8N5Z5 321 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms