RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 ATP6V1E1P36543 226 aa12.76□□□□□ -0.37
COL8A1-201ENST00000261037 KLK7P49862 253 aa12.76□□□□□ -0.37
COL8A1-201ENST00000261037 AP2B1P63010 937 aa12.76□□□□□ -0.37
COL8A1-201ENST00000261037 ORC2Q13416 577 aaPredicted RBP12.76□□□□□ -0.37
COL8A1-201ENST00000261037 VEPH1Q14D04 833 aa12.76□□□□□ -0.37
COL8A1-201ENST00000261037 KIZQ2M2Z5 673 aa12.76□□□□□ -0.37
COL8A1-201ENST00000261037 TRIM72Q6ZMU5 477 aa12.76□□□□□ -0.37
COL8A1-201ENST00000261037 OSBPL5Q9H0X9 879 aaPredicted RBP12.76□□□□□ -0.37
COL8A1-201ENST00000261037 CLCA2Q9UQC9 943 aa12.76□□□□□ -0.37
COL8A1-201ENST00000261037 GTPBP10A4D1E9 387 aaKnown RBP12.75□□□□□ -0.37
COL8A1-201ENST00000261037 NBPF26B4DH59 902 aa12.75□□□□□ -0.37
COL8A1-201ENST00000261037 NBPF10Q6P3W6 841 aaKnown RBP12.75□□□□□ -0.37
COL8A1-201ENST00000261037 MMS22LQ6ZRQ5 1243 aa12.75□□□□□ -0.37
COL8A1-201ENST00000261037 NBPF15Q8N660 670 aa12.75□□□□□ -0.37
COL8A1-201ENST00000261037 TSC22D3Q99576 134 aa12.75□□□□□ -0.37
COL8A1-201ENST00000261037 ETNK1Q9HBU6 452 aa12.75□□□□□ -0.37
COL8A1-201ENST00000261037 GGPS1O95749 300 aa12.75□□□□□ -0.37
COL8A1-201ENST00000261037 BLVRAP53004 296 aa12.75□□□□□ -0.37
COL8A1-201ENST00000261037 ATXN3P54252 364 aaPredicted RBP12.75□□□□□ -0.37
COL8A1-201ENST00000261037 SYTL3Q4VX76 610 aa12.75□□□□□ -0.37
COL8A1-201ENST00000261037 CEP55Q53EZ4 464 aa12.75□□□□□ -0.37
COL8A1-201ENST00000261037 ZC2HC1CQ53FD0 456 aaPredicted RBP12.75□□□□□ -0.37
COL8A1-201ENST00000261037 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.75□□□□□ -0.37
COL8A1-201ENST00000261037 ZBTB12Q9Y330 459 aaPredicted RBP12.75□□□□□ -0.37
COL8A1-201ENST00000261037 PYGLP06737 847 aa12.75□□□□□ -0.37
COL8A1-201ENST00000261037 RCAN1P53805 252 aa12.75□□□□□ -0.37
COL8A1-201ENST00000261037 SLC25A41Q8N5S1 370 aa12.75□□□□□ -0.37
COL8A1-201ENST00000261037 ZFYVE19Q96K21 471 aa12.75□□□□□ -0.37
COL8A1-201ENST00000261037 SEPT5Q99719 369 aaPredicted RBP12.75□□□□□ -0.37
COL8A1-201ENST00000261037 YIPF3Q9GZM5 350 aa12.75□□□□□ -0.37
COL8A1-201ENST00000261037 FAM96AQ9H5X1 160 aa12.75□□□□□ -0.37
COL8A1-201ENST00000261037 MAD2L2Q9UI95 211 aa12.75□□□□□ -0.37
COL8A1-201ENST00000261037 DYNC1LI2O43237 492 aaPredicted RBP12.75□□□□□ -0.37
COL8A1-201ENST00000261037 ZFXP17010 805 aaPredicted RBP12.75□□□□□ -0.37
COL8A1-201ENST00000261037 NLRP11P59045 1033 aaKnown RBP12.75□□□□□ -0.37
COL8A1-201ENST00000261037 TERF2Q15554 542 aa12.75□□□□□ -0.37
COL8A1-201ENST00000261037 ENOSF1Q7L5Y1 443 aa12.75□□□□□ -0.37
COL8A1-201ENST00000261037 TADA2BQ86TJ2 420 aa12.75□□□□□ -0.37
COL8A1-201ENST00000261037 TEX12Q9BXU0 123 aa12.75□□□□□ -0.37
COL8A1-201ENST00000261037 GFAPP14136 432 aa12.75□□□□□ -0.37
COL8A1-201ENST00000261037 KDSRQ06136 332 aa12.75□□□□□ -0.37
COL8A1-201ENST00000261037 CCDC85BQ15834 202 aaPredicted RBP12.75□□□□□ -0.37
COL8A1-201ENST00000261037 CHP1Q99653 195 aa12.75□□□□□ -0.37
COL8A1-201ENST00000261037 ASPSCR1Q9BZE9 553 aa12.75□□□□□ -0.37
COL8A1-201ENST00000261037 EML4Q9HC35 981 aaKnown RBP12.75□□□□□ -0.37
COL8A1-201ENST00000261037 DLC1Q96QB1 1528 aa12.75□□□□□ -0.37
COL8A1-201ENST00000261037 RFX7Q2KHR2 1363 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 TCP11X1B4DZS4 312 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 TLR2O60603 784 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 TADA2AO75478 443 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 ATP5HO75947 161 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 OCM2P0CE71 109 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 OCMP0CE72 109 aaPredicted RBP12.74□□□□□ -0.37
COL8A1-201ENST00000261037 MTM1Q13496 603 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 TMEM132DQ14C87 1099 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 NUP93Q8N1F7 819 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 DCUN1D1Q96GG9 259 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 PHF20Q9BVI0 1012 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 ZFATQ9P243 1243 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 XPO7Q9UIA9 1087 aaKnown RBP12.74□□□□□ -0.37
COL8A1-201ENST00000261037 DBR1Q9UK59 544 aaKnown RBP12.74□□□□□ -0.37
COL8A1-201ENST00000261037 ZC3H13Q5T200 1668 aaKnown RBP12.74□□□□□ -0.37
COL8A1-201ENST00000261037 NT5C2P49902 561 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 TAP1Q03518 808 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 OCA2Q04671 838 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 PDAP1Q13442 181 aaKnown RBP12.74□□□□□ -0.37
COL8A1-201ENST00000261037 ZNF513Q8N8E2 541 aaPredicted RBP12.74□□□□□ -0.37
COL8A1-201ENST00000261037 TNIP3Q96KP6 325 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 EPAS1Q99814 870 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 IRX2Q9BZI1 471 aaPredicted RBP12.74□□□□□ -0.37
COL8A1-201ENST00000261037 FAM49BQ9NUQ9 324 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 ZNF609O15014 1411 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 PNPLA7Q6ZV29 1317 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 AP3M2P53677 418 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 RAD23BP54727 409 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 SPDYAQ5MJ70 313 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 GRAMD4Q6IC98 578 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 TRIM54Q9BYV2 358 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 TRABDQ9H4I3 376 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 STX18Q9P2W9 335 aaKnown RBP12.74□□□□□ -0.37
COL8A1-201ENST00000261037 APEX2Q9UBZ4 518 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 HERC5Q9UII4 1024 aaKnown RBP12.74□□□□□ -0.37
COL8A1-201ENST00000261037 ZDHHC9Q9Y397 364 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 SPDYE5A6NIY4 337 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 SLC16A3O15427 465 aaKnown RBP12.74□□□□□ -0.37
COL8A1-201ENST00000261037 HSPA9P38646 679 aaKnown RBP12.74□□□□□ -0.37
COL8A1-201ENST00000261037 EFNA5P52803 228 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 EMC2Q15006 297 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 SPDYE7PQ495Y7 208 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 UBA3Q8TBC4 463 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 CHCHD3Q9NX63 227 aaKnown RBP12.74□□□□□ -0.37
COL8A1-201ENST00000261037 MTMR4Q9NYA4 1195 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 ARHGEF40Q8TER5 1519 aa12.74□□□□□ -0.37
COL8A1-201ENST00000261037 PDXKO00764 312 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 ADRA2BP18089 450 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 DEUP1Q05D60 604 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 DHX34Q14147 1143 aaKnown RBP12.73□□□□□ -0.37
COL8A1-201ENST00000261037 ATPAF2Q8N5M1 289 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 ICA1LQ8NDH6 482 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 MUC3BQ9H195 1237 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms