RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 PRDM10Q9NQV6 1147 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 PACSIN2Q9UNF0 486 aaPredicted RBP6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 FAM72CH0Y354 149 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 USP46P62068 366 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 YBX1P67809 324 aaKnown RBP6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 KCNH2Q12809 1159 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 KCNA10Q16322 511 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 FAM72AQ5TYM5 149 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 FAM72DQ6L9T8 149 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 PNMA8AQ86V59 439 aaPredicted RBP6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 FAM72BQ86X60 149 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 CHST13Q8NET6 341 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 SPIRE2Q8WWL2 714 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 DNAI2Q9GZS0 605 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 MLXIPQ9HAP2 919 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 VWFP04275 2813 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 KNL1Q8NG31 2342 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 GOLGA8IPA6NC78 632 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 GOLGA8JA6NMD2 632 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 PLS3P13797 630 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 QARSP47897 775 aaKnown RBP6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 CYP24A1Q07973 514 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 GPR162Q16538 588 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 DTHD1Q6ZMT9 781 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 CNOT6LQ96LI5 555 aaKnown RBP6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 ZCCHC17Q9NP64 241 aaKnown RBP6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 SLC9A2Q9UBY0 812 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 ASS1P00966 412 aaKnown RBP6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 ATP1A1P05023 1023 aaKnown RBP6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 MARK3P27448 753 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 GPD2P43304 727 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 KIF22Q14807 665 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 ZDHHC24Q6UX98 284 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 IWS1Q96ST2 819 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 VPS16Q9H269 839 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 GCOM1H8Y6P7 765 aaPredicted RBP6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 SOX1O00570 391 aaPredicted RBP6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 NRP1O14786 923 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 SART1O43290 800 aaKnown RBP6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 POLR2MP0CAP2 368 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 H2AFXP16104 143 aaPredicted RBP6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 DEFB103AP81534 67 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 EDRF1Q3B7T1 1238 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 NCAPH2Q6IBW4 605 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 RHBDF2Q6PJF5 856 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 LPPQ93052 612 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 ARMC5Q96C12 935 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 RSPRY1Q96DX4 576 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 CPXM1Q96SM3 734 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 WDR6Q9NNW5 1121 aaKnown RBP6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.19□□□□□ -1.429e-15■■■■■ 186.3
TOPBP1-201ENST00000260810 PHF24Q9UPV7 400 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 F5P12259 2224 aa6.19□□□□□ -1.42
TOPBP1-201ENST00000260810 H3BNC9 293 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 COPB2P35606 906 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 CCR2P41597 374 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 FGD1P98174 961 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 INCA1Q0VD86 236 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 FAM102BQ5T8I3 360 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 ANKRD33Q7Z3H0 272 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 HAUS6Q7Z4H7 955 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 EID2BQ96D98 161 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 MS4A14Q96JA4 679 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 SLC22A12Q96S37 553 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 TUBGCP2Q9BSJ2 902 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 B3GNT5Q9BYG0 378 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 PCDHA10Q9Y5I2 948 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 DCDC2CA8MYV0 355 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 CXCL8P10145 99 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 TAS2R40P59535 323 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 SLC25A11Q02978 314 aaKnown RBP6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 COL19A1Q14993 1142 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 NBPF20Q3BBV1 942 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 TMEM151AQ8N4L1 468 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 PWWP2AQ96N64 755 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 PCIF1Q9H4Z3 704 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 SRRDQ9UH36 339 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 XPO7Q9UIA9 1087 aaKnown RBP6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 GTF3C4Q9UKN8 822 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 CACNA1AO00555 2505 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 KCNJ18B7U540 433 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 NCK2O43639 380 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 P4HBP07237 508 aaKnown RBP6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 SLC3A2P08195 630 aaKnown RBP6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 CBLBQ13191 982 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 KCNJ12Q14500 433 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 C2orf27AQ580R0 203 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 TRAPPC11Q7Z392 1133 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 CASD1Q96PB1 797 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 TOMM22Q9NS69 142 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 HYOU1Q9Y4L1 999 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 CTDP1Q9Y5B0 961 aaPredicted RBP6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 A0A1W2PQ45 241 aaPredicted RBP6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 A0A1W2PQY0 241 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 KIZQ2M2Z5 673 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 KCNT1Q5JUK3 1230 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 C1orf53Q5VUE5 145 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 TPH2Q8IWU9 490 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 PPP1R16BQ96T49 567 aa6.18□□□□□ -1.42
TOPBP1-201ENST00000260810 NDST4Q9H3R1 872 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms