RNA–Protein interactions for RNA: ENST00000257632.9

UPK3B-201, Transcript of uroplakin 3B, humanhuman

APPRIS P5 TSL 2 BASIC

Gene UPK3B, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-201ENST00000257632 AUTS2Q8WXX7 1259 aa20.34■□□□□ 0.85
UPK3B-201ENST00000257632 KIF12Q96FN5 646 aa20.34■□□□□ 0.85
UPK3B-201ENST00000257632 CDCA3Q99618 268 aaPredicted RBP20.34■□□□□ 0.85
UPK3B-201ENST00000257632 HERC2P3Q9BVR0 1158 aa20.34■□□□□ 0.85
UPK3B-201ENST00000257632 VN1R3Q9BXE9 311 aa20.34■□□□□ 0.85
UPK3B-201ENST00000257632 GOLGA2P5Q9HBQ8 144 aa20.34■□□□□ 0.85
UPK3B-201ENST00000257632 CPSF3Q9UKF6 684 aaKnown RBP20.34■□□□□ 0.85
UPK3B-201ENST00000257632 SF3B1O75533 1304 aaKnown RBP eCLIP20.33■□□□□ 0.85
UPK3B-201ENST00000257632 UBE4BO95155 1302 aa20.33■□□□□ 0.85
UPK3B-201ENST00000257632 C2orf71A6NGG8 1288 aa20.33■□□□□ 0.85
UPK3B-201ENST00000257632 TULP1O00294 542 aaPredicted RBP20.33■□□□□ 0.85
UPK3B-201ENST00000257632 FAM189A1O60320 539 aa20.33■□□□□ 0.85
UPK3B-201ENST00000257632 KIF4AO95239 1232 aa20.33■□□□□ 0.85
UPK3B-201ENST00000257632 GARTP22102 1010 aa20.33■□□□□ 0.85
UPK3B-201ENST00000257632 KCNA5P22460 613 aa20.33■□□□□ 0.85
UPK3B-201ENST00000257632 NDUFV1P49821 464 aa20.33■□□□□ 0.85
UPK3B-201ENST00000257632 MRPS5P82675 430 aaKnown RBP20.33■□□□□ 0.85
UPK3B-201ENST00000257632 TFF2Q03403 129 aa20.33■□□□□ 0.85
UPK3B-201ENST00000257632 SPAG1Q07617 926 aa20.33■□□□□ 0.85
UPK3B-201ENST00000257632 EHHADHQ08426 723 aa20.33■□□□□ 0.85
UPK3B-201ENST00000257632 ENOX2Q16206 610 aaKnown RBP20.33■□□□□ 0.85
UPK3B-201ENST00000257632 DUSP6Q16828 381 aa20.33■□□□□ 0.85
UPK3B-201ENST00000257632 KMT5BQ4FZB7 885 aa20.33■□□□□ 0.85
UPK3B-201ENST00000257632 NOC3LQ8WTT2 800 aaKnown RBP20.33■□□□□ 0.85
UPK3B-201ENST00000257632 DDX27Q96GQ7 796 aaKnown RBP20.33■□□□□ 0.85
UPK3B-201ENST00000257632 MRPL17Q9NRX2 175 aaKnown RBP20.33■□□□□ 0.85
UPK3B-201ENST00000257632 SSX2IPQ9Y2D8 614 aa20.33■□□□□ 0.85
UPK3B-201ENST00000257632 TTC26A0AVF1 554 aa20.32■□□□□ 0.84
UPK3B-201ENST00000257632 LACTBL1A8MY62 500 aa20.32■□□□□ 0.84
UPK3B-201ENST00000257632 C2CD2LO14523 706 aa20.32■□□□□ 0.84
UPK3B-201ENST00000257632 MEFVO15553 781 aaPredicted RBP20.32■□□□□ 0.84
UPK3B-201ENST00000257632 XPOTO43592 962 aaKnown RBP20.32■□□□□ 0.84
UPK3B-201ENST00000257632 KLRC4O43908 158 aa20.32■□□□□ 0.84
UPK3B-201ENST00000257632 B3GAT3O94766 335 aa20.32■□□□□ 0.84
UPK3B-201ENST00000257632 LDHAP00338 332 aaKnown RBP20.32■□□□□ 0.84
UPK3B-201ENST00000257632 RPN1P04843 607 aaKnown RBP20.32■□□□□ 0.84
UPK3B-201ENST00000257632 PRR29P0C7W0 189 aa20.32■□□□□ 0.84
UPK3B-201ENST00000257632 ADSSP30520 456 aa20.32■□□□□ 0.84
UPK3B-201ENST00000257632 GLUD2P49448 558 aa20.32■□□□□ 0.84
UPK3B-201ENST00000257632 CLCNKBP51801 687 aa20.32■□□□□ 0.84
UPK3B-201ENST00000257632 FAM160A1Q05DH4 1040 aa20.32■□□□□ 0.84
UPK3B-201ENST00000257632 SOX4Q06945 474 aaPredicted RBP20.32■□□□□ 0.84
UPK3B-201ENST00000257632 DCLRE1AQ6PJP8 1040 aa20.32■□□□□ 0.84
UPK3B-201ENST00000257632 EPM2AIP1Q7L775 607 aaPredicted RBP20.32■□□□□ 0.84
UPK3B-201ENST00000257632 CD302Q8IX05 232 aa20.32■□□□□ 0.84
UPK3B-201ENST00000257632 NELFCDQ8IXH7 590 aa20.32■□□□□ 0.84
UPK3B-201ENST00000257632 EFHBQ8N7U6 833 aa20.32■□□□□ 0.84
UPK3B-201ENST00000257632 ZNF507Q8TCN5 953 aa20.32■□□□□ 0.84
UPK3B-201ENST00000257632 ADAMTS19Q8TE59 1207 aa20.32■□□□□ 0.84
UPK3B-201ENST00000257632 C18orf25Q96B23 403 aaPredicted RBP20.32■□□□□ 0.84
UPK3B-201ENST00000257632 BRWD1Q9NSI6 2320 aa20.32■□□□□ 0.84
UPK3B-201ENST00000257632 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.31■□□□□ 0.84
UPK3B-201ENST00000257632 LINC01565O15544 149 aa20.31■□□□□ 0.84
UPK3B-201ENST00000257632 SRGAP2BP0DMP2 458 aa20.31■□□□□ 0.84
UPK3B-201ENST00000257632 ELAVL2Q12926 359 aaKnown RBP20.31■□□□□ 0.84
UPK3B-201ENST00000257632 PSMD2Q13200 908 aa20.31■□□□□ 0.84
UPK3B-201ENST00000257632 PTPN14Q15678 1187 aa20.31■□□□□ 0.84
UPK3B-201ENST00000257632 USP41Q3LFD5 358 aa20.31■□□□□ 0.84
UPK3B-201ENST00000257632 TAS1R1Q7RTX1 841 aa20.31■□□□□ 0.84
UPK3B-201ENST00000257632 FMR1NBQ8N0W7 255 aaPredicted RBP20.31■□□□□ 0.84
UPK3B-201ENST00000257632 SCFD1Q8WVM8 642 aa20.31■□□□□ 0.84
UPK3B-201ENST00000257632 SAAL1Q96ER3 474 aa20.31■□□□□ 0.84
UPK3B-201ENST00000257632 TSPAN18Q96SJ8 248 aa20.31■□□□□ 0.84
UPK3B-201ENST00000257632 CBWD1Q9BRT8 395 aa20.31■□□□□ 0.84
UPK3B-201ENST00000257632 FAM213AQ9BRX8 229 aa20.31■□□□□ 0.84
UPK3B-201ENST00000257632 EMILIN2Q9BXX0 1053 aa20.31■□□□□ 0.84
UPK3B-201ENST00000257632 GPR62Q9BZJ7 368 aa20.31■□□□□ 0.84
UPK3B-201ENST00000257632 PCIF1Q9H4Z3 704 aa20.31■□□□□ 0.84
UPK3B-201ENST00000257632 UBQLN1Q9UMX0 589 aaKnown RBP20.31■□□□□ 0.84
UPK3B-201ENST00000257632 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.31■□□□□ 0.84
UPK3B-201ENST00000257632 IRAK3Q9Y616 596 aa20.31■□□□□ 0.84
UPK3B-201ENST00000257632 H3BQ06 376 aaPredicted RBP20.3■□□□□ 0.84
UPK3B-201ENST00000257632 TMEM189-UBE2V1I3L0A0 370 aa20.3■□□□□ 0.84
UPK3B-201ENST00000257632 PODXLO00592 558 aa20.3■□□□□ 0.84
UPK3B-201ENST00000257632 KIAA0391O15091 583 aaKnown RBP20.3■□□□□ 0.84
UPK3B-201ENST00000257632 RPL9P32969 192 aaKnown RBP20.3■□□□□ 0.84
UPK3B-201ENST00000257632 DPYDQ12882 1025 aa20.3■□□□□ 0.84
UPK3B-201ENST00000257632 ADAM15Q13444 863 aa20.3■□□□□ 0.84
UPK3B-201ENST00000257632 COL19A1Q14993 1142 aa20.3■□□□□ 0.84
UPK3B-201ENST00000257632 UPP1Q16831 310 aa20.3■□□□□ 0.84
UPK3B-201ENST00000257632 CTC1Q2NKJ3 1217 aa20.3■□□□□ 0.84
UPK3B-201ENST00000257632 FAM171A1Q5VUB5 890 aa20.3■□□□□ 0.84
UPK3B-201ENST00000257632 LLGL2Q6P1M3 1020 aa20.3■□□□□ 0.84
UPK3B-201ENST00000257632 HS2ST1Q7LGA3 356 aa20.3■□□□□ 0.84
UPK3B-201ENST00000257632 CEP57Q86XR8 500 aa20.3■□□□□ 0.84
UPK3B-201ENST00000257632 RNF168Q8IYW5 571 aaPredicted RBP20.3■□□□□ 0.84
UPK3B-201ENST00000257632 UHRF1Q96T88 793 aaPredicted RBP20.3■□□□□ 0.84
UPK3B-201ENST00000257632 TUBGCP4Q9UGJ1 667 aa20.3■□□□□ 0.84
UPK3B-201ENST00000257632 NUB1Q9Y5A7 615 aa20.3■□□□□ 0.84
UPK3B-201ENST00000257632 ANK1P16157 1881 aa20.29■□□□□ 0.84
UPK3B-201ENST00000257632 TCF20Q9UGU0 1960 aaKnown RBP20.29■□□□□ 0.84
UPK3B-201ENST00000257632 GOLGA8IPA6NC78 632 aa20.29■□□□□ 0.84
UPK3B-201ENST00000257632 GOLGA8JA6NMD2 632 aa20.29■□□□□ 0.84
UPK3B-201ENST00000257632 TRAPPC3O43617 180 aa20.29■□□□□ 0.84
UPK3B-201ENST00000257632 POU5F1Q01860 360 aaKnown RBP20.29■□□□□ 0.84
UPK3B-201ENST00000257632 STK4Q13043 487 aa20.29■□□□□ 0.84
UPK3B-201ENST00000257632 JADE1Q6IE81 842 aa20.29■□□□□ 0.84
UPK3B-201ENST00000257632 GPD1LQ8N335 351 aa20.29■□□□□ 0.84
UPK3B-201ENST00000257632 BEST2Q8NFU1 509 aa20.29■□□□□ 0.84
UPK3B-201ENST00000257632 B3GALT6Q96L58 329 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms