RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 MMRN2Q9H8L6 949 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 STK17AQ9UEE5 414 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 ADGRB1O14514 1584 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 ARHGEF15O94989 841 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 PRG2P13727 222 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 CPA1P15085 419 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 PON2Q15165 354 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 PCSK7Q16549 785 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 RABL6Q3YEC7 729 aaPredicted RBP7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 SCYL1Q96KG9 808 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 HINFPQ9BQA5 517 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 GINS4Q9BRT9 223 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 ATP13A3Q9H7F0 1226 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 TYW1Q9NV66 732 aaKnown RBP7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 SNX13Q9Y5W8 968 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 ZSCAN5CA6NGD5 496 aaPredicted RBP7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 C2orf74A8MZ97 194 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 O00370 1275 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 ENC1O14682 589 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 IKBKBO14920 756 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 SPTLC2O15270 562 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 RGS5O15539 181 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 NFYCQ13952 458 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 PLS1Q14651 629 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 CLVS2Q5SYC1 327 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 DPY19L2Q6NUT2 758 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 LMBR1LQ6UX01 489 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 PTF1AQ7RTS3 328 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 VSTM4Q8IW00 320 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 BBS7Q8IWZ6 715 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 NPLOC4Q8TAT6 608 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 CNDP2Q96KP4 475 aaKnown RBP7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 PSMB7Q99436 277 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 ZSCAN5AQ9BUG6 496 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 DCDC2Q9UHG0 476 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 MROH1Q8NDA8 1641 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 MAP3K10Q02779 954 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 SPIRE1Q08AE8 756 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 ZYG11AQ6WRX3 759 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 BPHLQ86WA6 291 aaPredicted RBP7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 ANKRD53Q8N9V6 530 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 SAV1Q9H4B6 383 aaPredicted RBP7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 FBXO28Q9NVF7 368 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 DNM3Q9UQ16 869 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 TMEM131LA2VDJ0 1609 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 ARHGEF37A1IGU5 675 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 F8A1P23610 371 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 GPD2P43304 727 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 RPS6KA1Q15418 735 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 ARL13BQ3SXY8 428 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 RABGAP1LQ5R372 815 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 TRPC4APQ8TEL6 797 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 U2AF1L4Q8WU68 220 aaKnown RBP7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 WDR24Q96S15 920 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 ESYT1Q9BSJ8 1104 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 RNF41Q9H4P4 317 aaPredicted RBP7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 HMG20AQ9NP66 347 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 PKD2L2Q9NZM6 624 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 TNFAIP8O95379 198 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 TRIM49P0CI25 452 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 TRIM49CP0CI26 452 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 PRKAR1BP31321 381 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 PABPC1LQ4VXU2 614 aaKnown RBP7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 LRRC74BQ6ZQY2 392 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 C16orf62Q7Z3J2 963 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 TEX19Q8NA77 164 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 MIGA1Q8NAN2 632 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 IL17REQ8NFR9 667 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 OR7G1Q8NGA0 311 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 TPK1Q9H3S4 243 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 CUEDC2Q9H467 287 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 WDR6Q9NNW5 1121 aaKnown RBP7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 BAIAP2Q9UQB8 552 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 NFE2L3Q9Y4A8 694 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 PDPK1O15530 556 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 CCNFP41002 786 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 GEMIN4P57678 1058 aaKnown RBP7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 JADE1Q6IE81 842 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 PYHIN1Q6K0P9 492 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 APOA5Q6Q788 366 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 EPM2AIP1Q7L775 607 aaPredicted RBP7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 PODNQ7Z5L7 613 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 ZNF589Q86UQ0 364 aaPredicted RBP7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 ART5Q96L15 291 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 IER2Q9BTL4 223 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 BEGAINQ9BUH8 593 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 MLPHQ9BV36 600 aaPredicted RBP7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 UCKL1Q9NWZ5 548 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 ZNF212Q9UDV6 495 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 EPN1Q9Y6I3 576 aaPredicted RBP7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 CEP170BQ9Y4F5 1589 aaPredicted RBP7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 TECPR2O15040 1411 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 GTPBP10A4D1E9 387 aaKnown RBP7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 TK2O00142 265 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 STX7O15400 261 aaKnown RBP7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 RNASE9P60153 205 aaKnown RBP7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 CYP4F2P78329 520 aa7.1□□□□□ -1.27
PDGFRA-201ENST00000257290 SULT2A1Q06520 285 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms