RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 FBXL16Q8N461 479 aa14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 SLC7A14Q8TBB6 771 aa14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 DRC3Q9H069 523 aa14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 ZKSCAN5Q9Y2L8 839 aa14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 MRPS17Q9Y2R5 130 aaKnown RBP14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 SNX9Q9Y5X1 595 aa14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 NCOA4Q13772 614 aa14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 CELF3Q5SZQ8 465 aaKnown RBP14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 ARMC6Q6NXE6 501 aa14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 ZNF467Q7Z7K2 595 aaPredicted RBP14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 SYT2Q8N9I0 419 aaPredicted RBP14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 NCKAP1Q9Y2A7 1128 aa14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 PHF20L1A8MW92 1017 aa14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 DUSP11O75319 330 aaKnown RBP14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 GUCY2CP25092 1073 aa14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 TMC2Q8TDI7 906 aa14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 NGRNQ9NPE2 291 aaKnown RBP14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 LMBRD1Q9NUN5 540 aa14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 HMGB3O15347 200 aaKnown RBP14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 FGBP02675 491 aa14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 KRT15P19012 456 aa14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 CTAGE3PQ8IX95 158 aa14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 SRPK1Q96SB4 655 aaKnown RBP14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 CALN1Q9BXU9 219 aa14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 TMX1Q9H3N1 280 aa14.24□□□□□ -0.13
PRPF38A-201ENST00000257181 PIK3CDO00329 1044 aa14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 SYNCRIPO60506 623 aaKnown RBP14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 BSPRYQ5W0U4 402 aa14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 BTNL9Q6UXG8 535 aa14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 TRPM4Q8TD43 1214 aa14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 FRMD8P1Q9BZ68 369 aaPredicted RBP14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 DDX20Q9UHI6 824 aaKnown RBP14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 SIGLEC1Q9BZZ2 1709 aa14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 LRRD1A4D1F6 860 aa14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 FAM173BQ6P4H8 233 aa14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 PPP1R12CQ9BZL4 782 aa14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 UNC45AQ9H3U1 944 aa14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 FAM96AQ9H5X1 160 aa14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 C11orf49Q9H6J7 331 aa14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 ZNF510Q9Y2H8 683 aa14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 MYO5BQ9ULV0 1848 aa14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 A0A1W2PQC6 194 aa14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 TMEM247A6NEH6 219 aa14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 MAP3K13O43283 966 aa14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 IFNA8P32881 189 aa14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 SPATA24Q86W54 205 aa14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 SKAP1Q86WV1 359 aa14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 WDR49Q8IV35 697 aa14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 LRRC43Q8N309 656 aa14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 SCYL1Q96KG9 808 aa14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 XPO4Q9C0E2 1151 aaKnown RBP14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 RAD18Q9NS91 495 aa14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 TACC3Q9Y6A5 838 aa14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 KLRK1P26718 216 aa14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 SLMAPQ14BN4 828 aa14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 SPDYE1Q8NFV5 336 aaPredicted RBP14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 ZNF518BQ9C0D4 1074 aa14.23□□□□□ -0.13
PRPF38A-201ENST00000257181 LGALS16A8MUM7 142 aa14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 PGK2P07205 417 aa14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 INHBAP08476 426 aa14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 RENBPP51606 427 aa14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 PRKCQQ04759 706 aa14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 OOSP2Q86WS3 158 aa14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 RSAD1Q9HA92 442 aa14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 SLC28A3Q9HAS3 691 aa14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 TLR8Q9NR97 1041 aaKnown RBP14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 KLHL8Q9P2G9 620 aaPredicted RBP14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 PGRMC1O00264 195 aaKnown RBP14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 IRF6O14896 467 aa14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 GSTA1P08263 222 aa14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 GSTA2P09210 222 aa14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 ACADMP11310 421 aa14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 FANCLQ9NW38 375 aa14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 NSMCE4AQ9NXX6 385 aa14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 TBX20Q9UMR3 447 aa14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 ARHGAP42A6NI28 874 aa14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 TROVE2P10155 538 aaKnown RBP eCLIP14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 SELPP16109 830 aa14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 SNRNP35Q16560 246 aaKnown RBP14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 TAF1BQ53T94 588 aaPredicted RBP14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 C12orf42Q96LP6 360 aa14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 RIPOR3Q96MK2 946 aa14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 MOSPD1Q9UJG1 213 aa14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 MAD1L1Q9Y6D9 718 aa14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 CCDC188H7C350 402 aa14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 SULT1E1P49888 294 aa14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 TPI1P60174 286 aa14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 CEP120Q8N960 986 aa14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 C18orf8Q96DM3 657 aa14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 TMEM134Q9H6X4 195 aa14.22□□□□□ -0.13
PRPF38A-201ENST00000257181 MSH4O15457 936 aa14.21□□□□□ -0.13
PRPF38A-201ENST00000257181 GJB1P08034 283 aa14.21□□□□□ -0.13
PRPF38A-201ENST00000257181 RPL9P32969 192 aaKnown RBP14.21□□□□□ -0.13
PRPF38A-201ENST00000257181 PIGHQ14442 188 aaPredicted RBP14.21□□□□□ -0.13
PRPF38A-201ENST00000257181 POLD3Q15054 466 aaPredicted RBP14.21□□□□□ -0.13
PRPF38A-201ENST00000257181 WDR72Q3MJ13 1102 aa14.21□□□□□ -0.13
PRPF38A-201ENST00000257181 OLFML2BQ68BL8 750 aa14.21□□□□□ -0.13
PRPF38A-201ENST00000257181 FAM117BQ6P1L5 589 aa14.21□□□□□ -0.13
PRPF38A-201ENST00000257181 ZDHHC17Q8IUH5 632 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms