RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 TISP43B9A030 160 aa25.06■■□□□ 1.6
LSM4-201ENST00000252816 ANKRD63C9JTQ0 380 aa25.06■■□□□ 1.6
LSM4-201ENST00000252816 CXCL8P10145 99 aa25.06■■□□□ 1.6
LSM4-201ENST00000252816 IDEP14735 1019 aa25.06■■□□□ 1.6
LSM4-201ENST00000252816 GAP43P17677 238 aa25.06■■□□□ 1.6
LSM4-201ENST00000252816 TNFSF9P41273 254 aa25.06■■□□□ 1.6
LSM4-201ENST00000252816 TPRNQ4KMQ1 711 aa25.06■■□□□ 1.6
LSM4-201ENST00000252816 FAM171A1Q5VUB5 890 aa25.06■■□□□ 1.6
LSM4-201ENST00000252816 GPR65Q8IYL9 337 aa25.06■■□□□ 1.6
LSM4-201ENST00000252816 C3orf58Q8NDZ4 430 aa25.06■■□□□ 1.6
LSM4-201ENST00000252816 FEZF2Q8TBJ5 459 aa25.06■■□□□ 1.6
LSM4-201ENST00000252816 MRPL44Q9H9J2 332 aaKnown RBP25.06■■□□□ 1.6
LSM4-201ENST00000252816 SLC38A7Q9NVC3 462 aa25.06■■□□□ 1.6
LSM4-201ENST00000252816 DZANK1Q9NVP4 752 aa25.06■■□□□ 1.6
LSM4-201ENST00000252816 KBTBD4Q9NVX7 518 aa25.06■■□□□ 1.6
LSM4-201ENST00000252816 SEL1LQ9UBV2 794 aa25.06■■□□□ 1.6
LSM4-201ENST00000252816 CITO14578 2027 aa25.05■■□□□ 1.6
LSM4-201ENST00000252816 TMEM189-UBE2V1I3L0A0 370 aa25.05■■□□□ 1.6
LSM4-201ENST00000252816 B3GAT3O94766 335 aa25.05■■□□□ 1.6
LSM4-201ENST00000252816 ADH1AP07327 375 aa25.05■■□□□ 1.6
LSM4-201ENST00000252816 CLTAP09496 248 aa25.05■■□□□ 1.6
LSM4-201ENST00000252816 ABCD1P33897 745 aa25.05■■□□□ 1.6
LSM4-201ENST00000252816 RARS2Q5T160 578 aaKnown RBP25.05■■□□□ 1.6
LSM4-201ENST00000252816 DCLRE1AQ6PJP8 1040 aa25.05■■□□□ 1.6
LSM4-201ENST00000252816 PRSS55Q6UWB4 352 aaPredicted RBP25.05■■□□□ 1.6
LSM4-201ENST00000252816 FBXL18Q96ME1 805 aa25.05■■□□□ 1.6
LSM4-201ENST00000252816 UROC1Q96N76 676 aa25.05■■□□□ 1.6
LSM4-201ENST00000252816 FGFBP2Q9BYJ0 223 aa25.05■■□□□ 1.6
LSM4-201ENST00000252816 TNMDQ9H2S6 317 aa25.05■■□□□ 1.6
LSM4-201ENST00000252816 ADAM7Q9H2U9 754 aa25.05■■□□□ 1.6
LSM4-201ENST00000252816 TTC26A0AVF1 554 aa25.04■■□□□ 1.6
LSM4-201ENST00000252816 OGTO15294 1046 aa25.04■■□□□ 1.6
LSM4-201ENST00000252816 RPL17P18621 184 aaKnown RBP25.04■■□□□ 1.6
LSM4-201ENST00000252816 CASP5P51878 434 aa25.04■■□□□ 1.6
LSM4-201ENST00000252816 KCNA1Q09470 495 aa25.04■■□□□ 1.6
LSM4-201ENST00000252816 CBX2Q14781 532 aaPredicted RBP25.04■■□□□ 1.6
LSM4-201ENST00000252816 HERC4Q5GLZ8 1057 aaPredicted RBP25.04■■□□□ 1.6
LSM4-201ENST00000252816 RESP18Q5W5W9 173 aa25.04■■□□□ 1.6
LSM4-201ENST00000252816 TMEM130Q8N3G9 435 aa25.04■■□□□ 1.6
LSM4-201ENST00000252816 IQUBQ8NA54 791 aa25.04■■□□□ 1.6
LSM4-201ENST00000252816 POP1Q99575 1024 aaKnown RBP25.04■■□□□ 1.6
LSM4-201ENST00000252816 TTPALQ9BTX7 342 aa25.04■■□□□ 1.6
LSM4-201ENST00000252816 MSTO1Q9BUK6 570 aa25.04■■□□□ 1.6
LSM4-201ENST00000252816 CUEDC2Q9H467 287 aa25.04■■□□□ 1.6
LSM4-201ENST00000252816 PANK4Q9NVE7 773 aa25.04■■□□□ 1.6
LSM4-201ENST00000252816 POLR2DO15514 142 aaKnown RBP25.03■■□□□ 1.6
LSM4-201ENST00000252816 WEE2P0C1S8 567 aa25.03■■□□□ 1.6
LSM4-201ENST00000252816 SPAG1Q07617 926 aa25.03■■□□□ 1.6
LSM4-201ENST00000252816 ELAVL2Q12926 359 aaKnown RBP25.03■■□□□ 1.6
LSM4-201ENST00000252816 ENOX2Q16206 610 aaKnown RBP25.03■■□□□ 1.6
LSM4-201ENST00000252816 CEP57Q86XR8 500 aa25.03■■□□□ 1.6
LSM4-201ENST00000252816 HVCN1Q96D96 273 aa25.03■■□□□ 1.6
LSM4-201ENST00000252816 DDX27Q96GQ7 796 aaKnown RBP25.03■■□□□ 1.6
LSM4-201ENST00000252816 PHF7Q9BWX1 381 aaPredicted RBP25.03■■□□□ 1.6
LSM4-201ENST00000252816 EPHX3Q9H6B9 360 aa25.03■■□□□ 1.6
LSM4-201ENST00000252816 PLEKHA5Q9HAU0 1116 aa25.03■■□□□ 1.6
LSM4-201ENST00000252816 OLFML3Q9NRN5 406 aa25.03■■□□□ 1.6
LSM4-201ENST00000252816 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.03■■□□□ 1.6
LSM4-201ENST00000252816 FNIP2Q9P278 1114 aa25.03■■□□□ 1.6
LSM4-201ENST00000252816 I3L4J1 428 aa25.02■■□□□ 1.6
LSM4-201ENST00000252816 PODXLO00592 558 aa25.02■■□□□ 1.6
LSM4-201ENST00000252816 MYBP10242 640 aa25.02■■□□□ 1.6
LSM4-201ENST00000252816 BRCC3P46736 316 aa25.02■■□□□ 1.6
LSM4-201ENST00000252816 ITIH3Q06033 890 aa25.02■■□□□ 1.6
LSM4-201ENST00000252816 CES5AQ6NT32 575 aa25.02■■□□□ 1.6
LSM4-201ENST00000252816 GLYCTKQ8IVS8 523 aa25.02■■□□□ 1.6
LSM4-201ENST00000252816 LNX1Q8TBB1 728 aaPredicted RBP25.02■■□□□ 1.6
LSM4-201ENST00000252816 PIK3R5Q8WYR1 880 aa25.02■■□□□ 1.6
LSM4-201ENST00000252816 TRIM9Q9C026 710 aa25.02■■□□□ 1.6
LSM4-201ENST00000252816 TUBGCP4Q9UGJ1 667 aa25.02■■□□□ 1.6
LSM4-201ENST00000252816 STYXL1Q9Y6J8 313 aa25.02■■□□□ 1.6
LSM4-201ENST00000252816 LACTBL1A8MY62 500 aa25.01■■□□□ 1.59
LSM4-201ENST00000252816 LOC730098B7Z3J9 87 aa25.01■■□□□ 1.59
LSM4-201ENST00000252816 GCNT3O95395 438 aa25.01■■□□□ 1.59
LSM4-201ENST00000252816 GLUD1P00367 558 aa25.01■■□□□ 1.59
LSM4-201ENST00000252816 FGFR3P22607 806 aa25.01■■□□□ 1.59
LSM4-201ENST00000252816 KYAT1Q16773 422 aa25.01■■□□□ 1.59
LSM4-201ENST00000252816 L1TD1Q5T7N2 865 aaKnown RBP25.01■■□□□ 1.59
LSM4-201ENST00000252816 TMC5Q6UXY8 1006 aa25.01■■□□□ 1.59
LSM4-201ENST00000252816 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.01■■□□□ 1.59
LSM4-201ENST00000252816 PALB2Q86YC2 1186 aa25.01■■□□□ 1.59
LSM4-201ENST00000252816 LEO1Q8WVC0 666 aaPredicted RBP25.01■■□□□ 1.59
LSM4-201ENST00000252816 MAN1C1Q9NR34 630 aa25.01■■□□□ 1.59
LSM4-201ENST00000252816 CPSF3Q9UKF6 684 aaKnown RBP25.01■■□□□ 1.59
LSM4-201ENST00000252816 PLXNA3P51805 1871 aa25■■□□□ 1.59
LSM4-201ENST00000252816 VWA8A3KMH1 1905 aa25■■□□□ 1.59
LSM4-201ENST00000252816 ADRB2P07550 413 aa25■■□□□ 1.59
LSM4-201ENST00000252816 SPATA31D3P0C874 917 aa25■■□□□ 1.59
LSM4-201ENST00000252816 ADSSP30520 456 aa25■■□□□ 1.59
LSM4-201ENST00000252816 RPL9P32969 192 aaKnown RBP25■■□□□ 1.59
LSM4-201ENST00000252816 BECN1Q14457 450 aa25■■□□□ 1.59
LSM4-201ENST00000252816 ZBTB6Q15916 424 aa25■■□□□ 1.59
LSM4-201ENST00000252816 PSMD5Q16401 504 aa25■■□□□ 1.59
LSM4-201ENST00000252816 SPATA31D4Q6ZUB0 917 aa25■■□□□ 1.59
LSM4-201ENST00000252816 CCDC65Q8IXS2 484 aa25■■□□□ 1.59
LSM4-201ENST00000252816 HPS3Q969F9 1004 aa25■■□□□ 1.59
LSM4-201ENST00000252816 RPGRIP1Q96KN7 1286 aa25■■□□□ 1.59
LSM4-201ENST00000252816 CLSTN3Q9BQT9 956 aa25■■□□□ 1.59
LSM4-201ENST00000252816 POMKQ9H5K3 350 aa25■■□□□ 1.59
LSM4-201ENST00000252816 SFXN1Q9H9B4 322 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms