RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 ZDHHC14Q8IZN3 488 aa23.23■■□□□ 1.31
CLN6-201ENST00000249806 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.23■■□□□ 1.312e-7■■■■■ 68.1
CLN6-201ENST00000249806 CDCA5Q96FF9 252 aa23.23■■□□□ 1.31
CLN6-201ENST00000249806 AGTPBP1Q9UPW5 1226 aa23.23■■□□□ 1.31
CLN6-201ENST00000249806 UTP11Q9Y3A2 253 aaKnown RBP23.23■■□□□ 1.31
CLN6-201ENST00000249806 CCDC66A2RUB6 948 aa23.23■■□□□ 1.31
CLN6-201ENST00000249806 SPDYE5A6NIY4 337 aa23.23■■□□□ 1.31
CLN6-201ENST00000249806 CXCL11O14625 94 aa23.23■■□□□ 1.31
CLN6-201ENST00000249806 SPOPO43791 374 aa23.23■■□□□ 1.31
CLN6-201ENST00000249806 SRGAP2CP0DJJ0 459 aa23.23■■□□□ 1.31
CLN6-201ENST00000249806 PPFIA1Q13136 1202 aa23.23■■□□□ 1.31
CLN6-201ENST00000249806 MKRN4PQ13434 485 aaPredicted RBP23.23■■□□□ 1.31
CLN6-201ENST00000249806 LRRC71Q8N4P6 559 aa23.23■■□□□ 1.31
CLN6-201ENST00000249806 WNT8AQ9H1J5 351 aa23.23■■□□□ 1.31
CLN6-201ENST00000249806 PCDHB2Q9Y5E7 798 aa23.23■■□□□ 1.31
CLN6-201ENST00000249806 TNFSF9P41273 254 aa23.22■■□□□ 1.31
CLN6-201ENST00000249806 ZSCAN26Q16670 478 aa23.22■■□□□ 1.31
CLN6-201ENST00000249806 WDR78Q5VTH9 848 aa23.22■■□□□ 1.31
CLN6-201ENST00000249806 KCTD16Q68DU8 428 aa23.22■■□□□ 1.31
CLN6-201ENST00000249806 ZBTB33Q86T24 672 aa23.22■■□□□ 1.31
CLN6-201ENST00000249806 SEC14L1Q92503 715 aa23.22■■□□□ 1.31
CLN6-201ENST00000249806 GPR20Q99678 358 aa23.22■■□□□ 1.31
CLN6-201ENST00000249806 UVRAGQ9P2Y5 699 aa23.22■■□□□ 1.31
CLN6-201ENST00000249806 GOLGA6L10A0A0M3HER8 536 aa23.21■■□□□ 1.31
CLN6-201ENST00000249806 CLDN3O15551 220 aa23.21■■□□□ 1.31
CLN6-201ENST00000249806 SLC25A27O95847 323 aa23.21■■□□□ 1.31
CLN6-201ENST00000249806 CFHP08603 1231 aa23.21■■□□□ 1.31
CLN6-201ENST00000249806 ACO1P21399 889 aaKnown RBP23.21■■□□□ 1.31
CLN6-201ENST00000249806 SCP2P22307 547 aa23.21■■□□□ 1.31
CLN6-201ENST00000249806 DR1Q01658 176 aa23.21■■□□□ 1.31
CLN6-201ENST00000249806 LLGL2Q6P1M3 1020 aa23.21■■□□□ 1.31
CLN6-201ENST00000249806 TRIM7Q9C029 511 aa23.21■■□□□ 1.31
CLN6-201ENST00000249806 LRRC37A2A6NM11 1700 aa23.21■■□□□ 1.31
CLN6-201ENST00000249806 UMODL1Q5DID0 1318 aa23.21■■□□□ 1.31
CLN6-201ENST00000249806 CLSTN1O94985 981 aa23.21■■□□□ 1.31
CLN6-201ENST00000249806 SSTR3P32745 418 aaPredicted RBP23.21■■□□□ 1.31
CLN6-201ENST00000249806 MOGSQ13724 837 aa23.21■■□□□ 1.31
CLN6-201ENST00000249806 FBXO16Q8IX29 292 aaPredicted RBP23.21■■□□□ 1.31
CLN6-201ENST00000249806 COPS5Q92905 334 aa23.21■■□□□ 1.31
CLN6-201ENST00000249806 C18orf8Q96DM3 657 aa23.21■■□□□ 1.31
CLN6-201ENST00000249806 FAM81BQ96LP2 452 aa23.21■■□□□ 1.31
CLN6-201ENST00000249806 CGRRF1Q99675 332 aa23.21■■□□□ 1.31
CLN6-201ENST00000249806 TCRBV7S2A1N4TA0A589 114 aa23.2■■□□□ 1.3
CLN6-201ENST00000249806 ZBTB42B2RXF5 422 aa23.2■■□□□ 1.3
CLN6-201ENST00000249806 NOP56O00567 594 aaKnown RBP23.2■■□□□ 1.3
CLN6-201ENST00000249806 MSCO60682 206 aa23.2■■□□□ 1.3
CLN6-201ENST00000249806 HSD17B3P37058 310 aa23.2■■□□□ 1.3
CLN6-201ENST00000249806 CUL2Q13617 745 aa23.2■■□□□ 1.3
CLN6-201ENST00000249806 DNAJC21Q5F1R6 531 aaKnown RBP23.2■■□□□ 1.3
CLN6-201ENST00000249806 CELF3Q5SZQ8 465 aaKnown RBP23.2■■□□□ 1.3
CLN6-201ENST00000249806 MCOLN2Q8IZK6 566 aa23.2■■□□□ 1.3
CLN6-201ENST00000249806 MORC4Q8TE76 937 aa23.2■■□□□ 1.3
CLN6-201ENST00000249806 OPTNQ96CV9 577 aa23.2■■□□□ 1.3
CLN6-201ENST00000249806 CYFIP2Q96F07 1278 aa23.2■■□□□ 1.3
CLN6-201ENST00000249806 ZNF668Q96K58 619 aaPredicted RBP23.2■■□□□ 1.3
CLN6-201ENST00000249806 TCHPQ9BT92 498 aa23.2■■□□□ 1.3
CLN6-201ENST00000249806 KCNH4Q9UQ05 1017 aa23.2■■□□□ 1.3
CLN6-201ENST00000249806 PLAAQ9Y263 795 aa23.2■■□□□ 1.3
CLN6-201ENST00000249806 NUB1Q9Y5A7 615 aa23.2■■□□□ 1.3
CLN6-201ENST00000249806 PCDHA3Q9Y5H8 950 aa23.2■■□□□ 1.3
CLN6-201ENST00000249806 CTNNA1P35221 906 aaKnown RBP23.2■■□□□ 1.3
CLN6-201ENST00000249806 LAMTOR4Q0VGL1 99 aa23.2■■□□□ 1.3
CLN6-201ENST00000249806 LLGL1Q15334 1064 aa23.2■■□□□ 1.3
CLN6-201ENST00000249806 UAP1Q16222 522 aaPredicted RBP23.2■■□□□ 1.3
CLN6-201ENST00000249806 TMEM270Q6UE05 265 aa23.2■■□□□ 1.3
CLN6-201ENST00000249806 SH2D3CQ8N5H7 860 aa23.2■■□□□ 1.3
CLN6-201ENST00000249806 PRELID2Q8N945 189 aa23.2■■□□□ 1.3
CLN6-201ENST00000249806 BBXQ8WY36 941 aaPredicted RBP23.2■■□□□ 1.3
CLN6-201ENST00000249806 CST3P01034 146 aaPredicted RBP23.19■■□□□ 1.3
CLN6-201ENST00000249806 RRM1P23921 792 aa23.19■■□□□ 1.3
CLN6-201ENST00000249806 KCTD2Q14681 263 aa23.19■■□□□ 1.3
CLN6-201ENST00000249806 LEKR1Q6ZMV7 388 aa23.19■■□□□ 1.3
CLN6-201ENST00000249806 RNF149Q8NC42 400 aa23.19■■□□□ 1.3
CLN6-201ENST00000249806 TRAPPC12Q8WVT3 735 aa23.19■■□□□ 1.3
CLN6-201ENST00000249806 MMP19Q99542 508 aa23.19■■□□□ 1.3
CLN6-201ENST00000249806 ANAPC7Q9UJX3 599 aa23.19■■□□□ 1.3
CLN6-201ENST00000249806 PCDHB4Q9Y5E5 795 aa23.19■■□□□ 1.3
CLN6-201ENST00000249806 DNAJC25-GNG10A0A024R161 153 aa23.18■■□□□ 1.3
CLN6-201ENST00000249806 NF2P35240 595 aa23.18■■□□□ 1.3
CLN6-201ENST00000249806 SEL1L2Q5TEA6 688 aa23.18■■□□□ 1.3
CLN6-201ENST00000249806 IER5Q5VY09 327 aa23.18■■□□□ 1.3
CLN6-201ENST00000249806 PASD1Q8IV76 773 aa23.18■■□□□ 1.3
CLN6-201ENST00000249806 ATP8B4Q8TF62 1192 aa23.18■■□□□ 1.3
CLN6-201ENST00000249806 ZBTB10Q96DT7 871 aa23.18■■□□□ 1.3
CLN6-201ENST00000249806 FAM189A1O60320 539 aa23.18■■□□□ 1.3
CLN6-201ENST00000249806 GJB1P08034 283 aa23.18■■□□□ 1.3
CLN6-201ENST00000249806 MAPK4P31152 587 aa23.18■■□□□ 1.3
CLN6-201ENST00000249806 NOP14P78316 857 aaKnown RBP23.18■■□□□ 1.3
CLN6-201ENST00000249806 PPIL2Q13356 520 aa23.18■■□□□ 1.3
CLN6-201ENST00000249806 CLUL1Q15846 466 aa23.18■■□□□ 1.3
CLN6-201ENST00000249806 C9orf131Q5VYM1 1079 aa23.18■■□□□ 1.3
CLN6-201ENST00000249806 ZPBP2Q6X784 338 aa23.18■■□□□ 1.3
CLN6-201ENST00000249806 FAM212AQ96EL1 285 aa23.18■■□□□ 1.3
CLN6-201ENST00000249806 FAM167AQ96KS9 214 aa23.18■■□□□ 1.3
CLN6-201ENST00000249806 SPATA33Q96N06 139 aa23.18■■□□□ 1.3
CLN6-201ENST00000249806 ERP44Q9BS26 406 aa23.18■■□□□ 1.3
CLN6-201ENST00000249806 CCDC113Q9H0I3 377 aa23.18■■□□□ 1.3
CLN6-201ENST00000249806 PDGFCQ9NRA1 345 aa23.18■■□□□ 1.3
CLN6-201ENST00000249806 FAM114A2Q9NRY5 505 aa23.18■■□□□ 1.3
CLN6-201ENST00000249806 BPIFB4P59827 614 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms