RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 CXCL8P10145 99 aa13.93□□□□□ -0.18
VPREB3-201ENST00000248948 HOXB8P17481 243 aaPredicted RBP13.93□□□□□ -0.18
VPREB3-201ENST00000248948 CMA1P23946 247 aa13.93□□□□□ -0.18
VPREB3-201ENST00000248948 ASIC1P78348 528 aa13.93□□□□□ -0.18
VPREB3-201ENST00000248948 POU5F1Q01860 360 aaKnown RBP13.93□□□□□ -0.18
VPREB3-201ENST00000248948 SMAD2Q15796 467 aaKnown RBP13.93□□□□□ -0.18
VPREB3-201ENST00000248948 USP41Q3LFD5 358 aa13.93□□□□□ -0.18
VPREB3-201ENST00000248948 HERC4Q5GLZ8 1057 aaPredicted RBP13.93□□□□□ -0.18
VPREB3-201ENST00000248948 TMEM87AQ8NBN3 555 aa13.93□□□□□ -0.18
VPREB3-201ENST00000248948 AUTS2Q8WXX7 1259 aa13.93□□□□□ -0.18
VPREB3-201ENST00000248948 DDX27Q96GQ7 796 aaKnown RBP13.93□□□□□ -0.18
VPREB3-201ENST00000248948 C7orf25Q9BPX7 421 aa13.93□□□□□ -0.18
VPREB3-201ENST00000248948 MSTO1Q9BUK6 570 aa13.93□□□□□ -0.18
VPREB3-201ENST00000248948 PRKAG3Q9UGI9 489 aa13.93□□□□□ -0.18
VPREB3-201ENST00000248948 PCDHB13Q9Y5F0 798 aa13.93□□□□□ -0.18
VPREB3-201ENST00000248948 FAM237AA0A1B0GTK4 181 aa13.92□□□□□ -0.18
VPREB3-201ENST00000248948 A0A1W2PQ27 194 aa13.92□□□□□ -0.18
VPREB3-201ENST00000248948 A0A1W2PQ64 194 aa13.92□□□□□ -0.18
VPREB3-201ENST00000248948 A0A1W2PQD8 194 aa13.92□□□□□ -0.18
VPREB3-201ENST00000248948 TTC26A0AVF1 554 aa13.92□□□□□ -0.18
VPREB3-201ENST00000248948 EIF3DO15371 548 aaKnown RBP eCLIP13.92□□□□□ -0.18
VPREB3-201ENST00000248948 MEFVO15553 781 aaPredicted RBP13.92□□□□□ -0.18
VPREB3-201ENST00000248948 TADA2AO75478 443 aa13.92□□□□□ -0.18
VPREB3-201ENST00000248948 C1RP00736 705 aa13.92□□□□□ -0.18
VPREB3-201ENST00000248948 ADH1AP07327 375 aa13.92□□□□□ -0.18
VPREB3-201ENST00000248948 ADRB2P07550 413 aa13.92□□□□□ -0.18
VPREB3-201ENST00000248948 IL9P15248 144 aa13.92□□□□□ -0.18
VPREB3-201ENST00000248948 PFKFB1P16118 471 aa13.92□□□□□ -0.18
VPREB3-201ENST00000248948 UPP1Q16831 310 aa13.92□□□□□ -0.18
VPREB3-201ENST00000248948 SLC10A6Q3KNW5 377 aa13.92□□□□□ -0.18
VPREB3-201ENST00000248948 KIAA0319Q5VV43 1072 aa13.92□□□□□ -0.18
VPREB3-201ENST00000248948 KIAA1841Q6NSI8 718 aa13.92□□□□□ -0.18
VPREB3-201ENST00000248948 ANKRD54Q6NXT1 300 aa13.92□□□□□ -0.18
VPREB3-201ENST00000248948 PDXDC1Q6P996 788 aa13.92□□□□□ -0.18
VPREB3-201ENST00000248948 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.92□□□□□ -0.18
VPREB3-201ENST00000248948 UNC13DQ70J99 1090 aa13.92□□□□□ -0.18
VPREB3-201ENST00000248948 CD302Q8IX05 232 aa13.92□□□□□ -0.18
VPREB3-201ENST00000248948 CEP57L1Q8IYX8 460 aa13.92□□□□□ -0.18
VPREB3-201ENST00000248948 ZMAT2Q96NC0 199 aaKnown RBP13.92□□□□□ -0.18
VPREB3-201ENST00000248948 KLHL5Q96PQ7 755 aa13.92□□□□□ -0.18
VPREB3-201ENST00000248948 ACCSQ96QU6 501 aa13.92□□□□□ -0.18
VPREB3-201ENST00000248948 POP1Q99575 1024 aaKnown RBP13.92□□□□□ -0.18
VPREB3-201ENST00000248948 GPR62Q9BZJ7 368 aa13.92□□□□□ -0.18
VPREB3-201ENST00000248948 TMEM206Q9H813 350 aa13.92□□□□□ -0.18
VPREB3-201ENST00000248948 RXFP1Q9HBX9 757 aa13.92□□□□□ -0.18
VPREB3-201ENST00000248948 CACNG4Q9UBN1 327 aa13.92□□□□□ -0.18
VPREB3-201ENST00000248948 CPSF3Q9UKF6 684 aaKnown RBP13.92□□□□□ -0.18
VPREB3-201ENST00000248948 HPSEQ9Y251 543 aa13.92□□□□□ -0.18
VPREB3-201ENST00000248948 C5orf42Q9H799 3197 aa13.92□□□□□ -0.18
VPREB3-201ENST00000248948 XPOTO43592 962 aaKnown RBP13.91□□□□□ -0.18
VPREB3-201ENST00000248948 TRAPPC3O43617 180 aa13.91□□□□□ -0.18
VPREB3-201ENST00000248948 ACTN4O43707 911 aaKnown RBP13.91□□□□□ -0.18
VPREB3-201ENST00000248948 B3GAT3O94766 335 aa13.91□□□□□ -0.18
VPREB3-201ENST00000248948 MYL1P05976 194 aa13.91□□□□□ -0.18
VPREB3-201ENST00000248948 CNPP09543 421 aaKnown RBP13.91□□□□□ -0.18
VPREB3-201ENST00000248948 SLFN14P0C7P3 912 aa13.91□□□□□ -0.18
VPREB3-201ENST00000248948 MYBP10242 640 aa13.91□□□□□ -0.18
VPREB3-201ENST00000248948 RPL9P32969 192 aaKnown RBP13.91□□□□□ -0.18
VPREB3-201ENST00000248948 TNFSF9P41273 254 aa13.91□□□□□ -0.18
VPREB3-201ENST00000248948 CLCN4P51793 760 aa13.91□□□□□ -0.18
VPREB3-201ENST00000248948 CLCNKBP51801 687 aa13.91□□□□□ -0.18
VPREB3-201ENST00000248948 CASP5P51878 434 aa13.91□□□□□ -0.18
VPREB3-201ENST00000248948 SOX4Q06945 474 aaPredicted RBP13.91□□□□□ -0.18
VPREB3-201ENST00000248948 EHHADHQ08426 723 aa13.91□□□□□ -0.18
VPREB3-201ENST00000248948 POSTNQ15063 836 aa13.91□□□□□ -0.18
VPREB3-201ENST00000248948 CLUL1Q15846 466 aa13.91□□□□□ -0.18
VPREB3-201ENST00000248948 ENOX2Q16206 610 aaKnown RBP13.91□□□□□ -0.18
VPREB3-201ENST00000248948 TPRNQ4KMQ1 711 aa13.91□□□□□ -0.18
VPREB3-201ENST00000248948 SEZ6Q53EL9 994 aa13.91□□□□□ -0.18
VPREB3-201ENST00000248948 LLGL2Q6P1M3 1020 aa13.91□□□□□ -0.18
VPREB3-201ENST00000248948 ELMSAN1Q6PJG2 1045 aa13.91□□□□□ -0.18
VPREB3-201ENST00000248948 DCLRE1AQ6PJP8 1040 aa13.91□□□□□ -0.18
VPREB3-201ENST00000248948 HASPINQ8TF76 798 aa13.91□□□□□ -0.18
VPREB3-201ENST00000248948 SLC22A17Q8WUG5 538 aa13.91□□□□□ -0.18
VPREB3-201ENST00000248948 PIK3R5Q8WYR1 880 aa13.91□□□□□ -0.18
VPREB3-201ENST00000248948 STAMQ92783 540 aa13.91□□□□□ -0.18
VPREB3-201ENST00000248948 RPF1Q9H9Y2 349 aaKnown RBP13.91□□□□□ -0.18
VPREB3-201ENST00000248948 GOLGA2P5Q9HBQ8 144 aa13.91□□□□□ -0.18
VPREB3-201ENST00000248948 TBC1D7Q9P0N9 293 aa13.91□□□□□ -0.18
VPREB3-201ENST00000248948 FNIP2Q9P278 1114 aa13.91□□□□□ -0.18
VPREB3-201ENST00000248948 UBQLN1Q9UMX0 589 aaKnown RBP13.91□□□□□ -0.18
VPREB3-201ENST00000248948 ANKRD63C9JTQ0 380 aa13.9□□□□□ -0.18
VPREB3-201ENST00000248948 TNFRSF10AO00220 468 aa13.9□□□□□ -0.18
VPREB3-201ENST00000248948 PODXLO00592 558 aa13.9□□□□□ -0.18
VPREB3-201ENST00000248948 C2CD2LO14523 706 aa13.9□□□□□ -0.18
VPREB3-201ENST00000248948 KIAA0391O15091 583 aaKnown RBP13.9□□□□□ -0.18
VPREB3-201ENST00000248948 CYP3A5P20815 502 aa13.9□□□□□ -0.18
VPREB3-201ENST00000248948 GARTP22102 1010 aa13.9□□□□□ -0.18
VPREB3-201ENST00000248948 RBM10P98175 930 aaKnown RBP13.9□□□□□ -0.18
VPREB3-201ENST00000248948 ITIH3Q06033 890 aa13.9□□□□□ -0.18
VPREB3-201ENST00000248948 RTP2Q5QGT7 225 aa13.9□□□□□ -0.18
VPREB3-201ENST00000248948 FAM26FQ5R3K3 315 aa13.9□□□□□ -0.18
VPREB3-201ENST00000248948 ZBTB41Q5SVQ8 909 aa13.9□□□□□ -0.18
VPREB3-201ENST00000248948 POMGNT1Q8WZA1 660 aa13.9□□□□□ -0.18
VPREB3-201ENST00000248948 SUSD6Q92537 303 aa13.9□□□□□ -0.18
VPREB3-201ENST00000248948 RABGGTAQ92696 567 aa13.9□□□□□ -0.18
VPREB3-201ENST00000248948 CHAMP1Q96JM3 812 aa13.9□□□□□ -0.18
VPREB3-201ENST00000248948 TTPALQ9BTX7 342 aa13.9□□□□□ -0.18
VPREB3-201ENST00000248948 FGFBP2Q9BYJ0 223 aa13.9□□□□□ -0.18
VPREB3-201ENST00000248948 SFXN1Q9H9B4 322 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms