RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 ARIH2O95376 493 aa16.88■□□□□ 0.29
LRFN1-201ENST00000248668 GZMAP12544 262 aa16.88■□□□□ 0.29
LRFN1-201ENST00000248668 RRM1P23921 792 aa16.88■□□□□ 0.29
LRFN1-201ENST00000248668 HSPA9P38646 679 aaKnown RBP16.88■□□□□ 0.29
LRFN1-201ENST00000248668 PTENP60484 403 aa16.88■□□□□ 0.29
LRFN1-201ENST00000248668 OSTNP61366 133 aa16.88■□□□□ 0.29
LRFN1-201ENST00000248668 SEL1L2Q5TEA6 688 aa16.88■□□□□ 0.29
LRFN1-201ENST00000248668 CHST13Q8NET6 341 aa16.88■□□□□ 0.29
LRFN1-201ENST00000248668 UHMK1Q8TAS1 419 aaKnown RBP16.88■□□□□ 0.29
LRFN1-201ENST00000248668 CYFIP2Q96F07 1278 aa16.88■□□□□ 0.29
LRFN1-201ENST00000248668 PPP1R16BQ96T49 567 aa16.88■□□□□ 0.29
LRFN1-201ENST00000248668 DHX33Q9H6R0 707 aaKnown RBP16.88■□□□□ 0.29
LRFN1-201ENST00000248668 APOBEC3GQ9HC16 384 aaKnown RBP16.88■□□□□ 0.29
LRFN1-201ENST00000248668 DAAM1Q9Y4D1 1078 aa16.88■□□□□ 0.29
LRFN1-201ENST00000248668 GRIN3BO60391 1043 aa16.87■□□□□ 0.29
LRFN1-201ENST00000248668 VNN1O95497 513 aa16.87■□□□□ 0.29
LRFN1-201ENST00000248668 POU5F1Q01860 360 aaKnown RBP16.87■□□□□ 0.29
LRFN1-201ENST00000248668 CAPSQ13938 189 aa16.87■□□□□ 0.29
LRFN1-201ENST00000248668 C11orf63Q6NUN7 778 aa16.87■□□□□ 0.29
LRFN1-201ENST00000248668 PRELID2Q8N945 189 aa16.87■□□□□ 0.29
LRFN1-201ENST00000248668 PRPF31Q8WWY3 499 aaKnown RBP16.87■□□□□ 0.29
LRFN1-201ENST00000248668 DCPSQ96C86 337 aaKnown RBP16.87■□□□□ 0.29
LRFN1-201ENST00000248668 PCDHB4Q9Y5E5 795 aa16.87■□□□□ 0.29
LRFN1-201ENST00000248668 IRAK1P51617 712 aa16.87■□□□□ 0.29
LRFN1-201ENST00000248668 SNX1Q13596 522 aa16.87■□□□□ 0.29
LRFN1-201ENST00000248668 ZNF394Q53GI3 561 aa16.87■□□□□ 0.29
LRFN1-201ENST00000248668 TTC27Q6P3X3 843 aa16.87■□□□□ 0.29
LRFN1-201ENST00000248668 JAMLQ86YT9 394 aa16.87■□□□□ 0.29
LRFN1-201ENST00000248668 COPS5Q92905 334 aa16.87■□□□□ 0.29
LRFN1-201ENST00000248668 C11orf70Q9BRQ4 267 aa16.87■□□□□ 0.29
LRFN1-201ENST00000248668 TXNRD2Q9NNW7 524 aa16.87■□□□□ 0.29
LRFN1-201ENST00000248668 CLDN3O15551 220 aa16.86■□□□□ 0.29
LRFN1-201ENST00000248668 GUCY1A3Q02108 690 aa16.86■□□□□ 0.29
LRFN1-201ENST00000248668 HSDL1Q3SXM5 330 aa16.86■□□□□ 0.29
LRFN1-201ENST00000248668 NOL9Q5SY16 702 aaKnown RBP16.86■□□□□ 0.29
LRFN1-201ENST00000248668 ACAD10Q6JQN1 1059 aa16.86■□□□□ 0.29
LRFN1-201ENST00000248668 TMEM130Q8N3G9 435 aa16.86■□□□□ 0.29
LRFN1-201ENST00000248668 DNERQ8NFT8 737 aa16.86■□□□□ 0.29
LRFN1-201ENST00000248668 VTI1AQ96AJ9 217 aa16.86■□□□□ 0.29
LRFN1-201ENST00000248668 FAM118BQ9BPY3 351 aa16.86■□□□□ 0.29
LRFN1-201ENST00000248668 GTF3C4Q9UKN8 822 aa16.86■□□□□ 0.29
LRFN1-201ENST00000248668 SMIM23A6NLE4 172 aa16.86■□□□□ 0.29
LRFN1-201ENST00000248668 PMM2O15305 246 aa16.86■□□□□ 0.29
LRFN1-201ENST00000248668 MAPK4P31152 587 aa16.86■□□□□ 0.29
LRFN1-201ENST00000248668 SSR1P43307 286 aaKnown RBP16.86■□□□□ 0.29
LRFN1-201ENST00000248668 CLEC16AQ2KHT3 1053 aa16.86■□□□□ 0.29
LRFN1-201ENST00000248668 ZACNQ401N2 412 aa16.86■□□□□ 0.29
LRFN1-201ENST00000248668 ATP8B4Q8TF62 1192 aa16.86■□□□□ 0.29
LRFN1-201ENST00000248668 STAM2O75886 525 aa16.86■□□□□ 0.29
LRFN1-201ENST00000248668 ECM2O94769 699 aaPredicted RBP16.86■□□□□ 0.29
LRFN1-201ENST00000248668 CD58P19256 250 aa16.86■□□□□ 0.29
LRFN1-201ENST00000248668 PEX5P50542 639 aa16.86■□□□□ 0.29
LRFN1-201ENST00000248668 FBXO16Q8IX29 292 aaPredicted RBP16.86■□□□□ 0.29
LRFN1-201ENST00000248668 C1orf54Q8WWF1 131 aa16.86■□□□□ 0.29
LRFN1-201ENST00000248668 NAP1L3Q99457 506 aaPredicted RBP16.86■□□□□ 0.29
LRFN1-201ENST00000248668 ASCC2Q9H1I8 757 aaPredicted RBP16.86■□□□□ 0.29
LRFN1-201ENST00000248668 MIF4GDA9UHW6 222 aaKnown RBP16.85■□□□□ 0.29
LRFN1-201ENST00000248668 O00370 1275 aa16.85■□□□□ 0.29
LRFN1-201ENST00000248668 C4BPAP04003 597 aaKnown RBP16.85■□□□□ 0.29
LRFN1-201ENST00000248668 CYP1A2P05177 515 aa16.85■□□□□ 0.29
LRFN1-201ENST00000248668 IVLP07476 585 aa16.85■□□□□ 0.29
LRFN1-201ENST00000248668 SCP2P22307 547 aa16.85■□□□□ 0.29
LRFN1-201ENST00000248668 RTP1P59025 263 aa16.85■□□□□ 0.29
LRFN1-201ENST00000248668 PSMD6Q15008 389 aa16.85■□□□□ 0.29
LRFN1-201ENST00000248668 Q3C1V9 767 aa16.85■□□□□ 0.29
LRFN1-201ENST00000248668 CCDC105Q8IYK2 499 aa16.85■□□□□ 0.29
LRFN1-201ENST00000248668 MICALL1Q8N3F8 863 aa16.85■□□□□ 0.29
LRFN1-201ENST00000248668 MREGQ8N565 214 aa16.85■□□□□ 0.29
LRFN1-201ENST00000248668 FMO2Q99518 471 aa16.85■□□□□ 0.29
LRFN1-201ENST00000248668 GOLGA6L10A6NI86 522 aa16.85■□□□□ 0.29
LRFN1-201ENST00000248668 CSDE1O75534 798 aaKnown RBP16.85■□□□□ 0.29
LRFN1-201ENST00000248668 ARL2P36404 184 aa16.85■□□□□ 0.29
LRFN1-201ENST00000248668 NAMPTP43490 491 aa16.85■□□□□ 0.29
LRFN1-201ENST00000248668 SH3D19Q5HYK7 790 aa16.85■□□□□ 0.29
LRFN1-201ENST00000248668 UBAP2Q5T6F2 1119 aaKnown RBP16.85■□□□□ 0.29
LRFN1-201ENST00000248668 CCDC137Q6PK04 289 aaKnown RBP16.85■□□□□ 0.29
LRFN1-201ENST00000248668 FBXO25Q8TCJ0 367 aa16.85■□□□□ 0.29
LRFN1-201ENST00000248668 LRRC45Q96CN5 670 aa16.85■□□□□ 0.29
LRFN1-201ENST00000248668 RNF181Q9P0P0 153 aa16.85■□□□□ 0.29
LRFN1-201ENST00000248668 TTC7AQ9ULT0 858 aaPredicted RBP16.85■□□□□ 0.29
LRFN1-201ENST00000248668 USTQ9Y2C2 406 aa16.85■□□□□ 0.29
LRFN1-201ENST00000248668 CEP83Q9Y592 693 aa16.85■□□□□ 0.29
LRFN1-201ENST00000248668 NUB1Q9Y5A7 615 aa16.85■□□□□ 0.29
LRFN1-201ENST00000248668 NOP56O00567 594 aaKnown RBP16.85■□□□□ 0.29
LRFN1-201ENST00000248668 GTF2H1P32780 548 aa16.85■□□□□ 0.29
LRFN1-201ENST00000248668 GCNT1Q02742 428 aa16.85■□□□□ 0.29
LRFN1-201ENST00000248668 TMC3Q7Z5M5 1100 aa16.85■□□□□ 0.29
LRFN1-201ENST00000248668 ATG4AQ8WYN0 398 aa16.85■□□□□ 0.29
LRFN1-201ENST00000248668 ERP44Q9BS26 406 aa16.85■□□□□ 0.29
LRFN1-201ENST00000248668 AZI2Q9H6S1 392 aa16.85■□□□□ 0.29
LRFN1-201ENST00000248668 ATG7O95352 703 aa16.84■□□□□ 0.29
LRFN1-201ENST00000248668 TMEM132AQ24JP5 1023 aa16.84■□□□□ 0.29
LRFN1-201ENST00000248668 SCARA5Q6ZMJ2 495 aa16.84■□□□□ 0.29
LRFN1-201ENST00000248668 C15orf39Q6ZRI6 1047 aa16.84■□□□□ 0.29
LRFN1-201ENST00000248668 RIOX2Q8IUF8 465 aa16.84■□□□□ 0.29
LRFN1-201ENST00000248668 RNF149Q8NC42 400 aa16.84■□□□□ 0.29
LRFN1-201ENST00000248668 BCAS4Q8TDM0 211 aa16.84■□□□□ 0.29
LRFN1-201ENST00000248668 FAM107BQ9H098 131 aa16.84■□□□□ 0.29
LRFN1-201ENST00000248668 NRBP2Q9NSY0 501 aa16.84■□□□□ 0.29
LRFN1-201ENST00000248668 LCTP09848 1927 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms