RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 ANAPC7Q9UJX3 599 aa23.13■■□□□ 1.29
SH2D3A-201ENST00000245908 RLFQ13129 1914 aa23.13■■□□□ 1.29
SH2D3A-201ENST00000245908 RGS16O15492 202 aaPredicted RBP23.13■■□□□ 1.29
SH2D3A-201ENST00000245908 KIF1CO43896 1103 aaKnown RBP23.13■■□□□ 1.29
SH2D3A-201ENST00000245908 AGTP01019 485 aa23.13■■□□□ 1.29
SH2D3A-201ENST00000245908 PSAPP07602 524 aa23.13■■□□□ 1.29
SH2D3A-201ENST00000245908 MAPK4P31152 587 aa23.13■■□□□ 1.29
SH2D3A-201ENST00000245908 RNF187Q5TA31 235 aaPredicted RBP23.13■■□□□ 1.29
SH2D3A-201ENST00000245908 ZNF677Q86XU0 584 aa23.13■■□□□ 1.29
SH2D3A-201ENST00000245908 MCOLN2Q8IZK6 566 aa23.13■■□□□ 1.29
SH2D3A-201ENST00000245908 SEC16BQ96JE7 1060 aa23.13■■□□□ 1.29
SH2D3A-201ENST00000245908 CAMKK2Q96RR4 588 aa23.13■■□□□ 1.29
SH2D3A-201ENST00000245908 DOCK5Q9H7D0 1870 aa23.13■■□□□ 1.29
SH2D3A-201ENST00000245908 DRD4P21917 467 aa23.12■■□□□ 1.29
SH2D3A-201ENST00000245908 REPS2Q8NFH8 660 aa23.12■■□□□ 1.29
SH2D3A-201ENST00000245908 ZNF516Q92618 1163 aa23.12■■□□□ 1.29
SH2D3A-201ENST00000245908 ADAM7Q9H2U9 754 aa23.12■■□□□ 1.29
SH2D3A-201ENST00000245908 NFASCO94856 1347 aa23.12■■□□□ 1.29
SH2D3A-201ENST00000245908 MYPNQ86TC9 1320 aa23.12■■□□□ 1.29
SH2D3A-201ENST00000245908 TLDC2A0PJX2 215 aa23.12■■□□□ 1.29
SH2D3A-201ENST00000245908 H0YCG3 227 aa23.12■■□□□ 1.29
SH2D3A-201ENST00000245908 RGS20O76081 388 aa23.12■■□□□ 1.29
SH2D3A-201ENST00000245908 FGFR4P22455 802 aa23.12■■□□□ 1.29
SH2D3A-201ENST00000245908 ZNF280AP59817 542 aaPredicted RBP23.12■■□□□ 1.29
SH2D3A-201ENST00000245908 CLDN10P78369 228 aa23.12■■□□□ 1.29
SH2D3A-201ENST00000245908 SWSAP1Q6NVH7 229 aa23.12■■□□□ 1.29
SH2D3A-201ENST00000245908 TRIM11Q96F44 468 aa23.12■■□□□ 1.29
SH2D3A-201ENST00000245908 BICD1Q96G01 975 aa23.12■■□□□ 1.29
SH2D3A-201ENST00000245908 IFT74Q96LB3 600 aa23.12■■□□□ 1.29
SH2D3A-201ENST00000245908 PDGFDQ9GZP0 370 aaPredicted RBP23.12■■□□□ 1.29
SH2D3A-201ENST00000245908 ATP6V0A4Q9HBG4 840 aa23.12■■□□□ 1.29
SH2D3A-201ENST00000245908 WHRNQ9P202 907 aa23.12■■□□□ 1.29
SH2D3A-201ENST00000245908 MROH7Q68CQ1 1323 aa23.11■■□□□ 1.29
SH2D3A-201ENST00000245908 EXTL3O43909 919 aa23.11■■□□□ 1.29
SH2D3A-201ENST00000245908 EGFRP00533 1210 aa23.11■■□□□ 1.29
SH2D3A-201ENST00000245908 CALCAP01258 141 aa23.11■■□□□ 1.29
SH2D3A-201ENST00000245908 MYBL1P10243 752 aa23.11■■□□□ 1.29
SH2D3A-201ENST00000245908 ABCD1P33897 745 aa23.11■■□□□ 1.29
SH2D3A-201ENST00000245908 PPP1R7Q15435 360 aa23.11■■□□□ 1.29
SH2D3A-201ENST00000245908 ZNF568Q3ZCX4 644 aa23.11■■□□□ 1.29
SH2D3A-201ENST00000245908 SGO2Q562F6 1265 aa23.11■■□□□ 1.29
SH2D3A-201ENST00000245908 TNFAIP8L3Q5GJ75 292 aa23.11■■□□□ 1.29
SH2D3A-201ENST00000245908 KIAA1586Q9HCI6 787 aa23.11■■□□□ 1.29
SH2D3A-201ENST00000245908 CYP26B1Q9NR63 512 aa23.11■■□□□ 1.29
SH2D3A-201ENST00000245908 SEPT9Q9UHD8 586 aaPredicted RBP23.11■■□□□ 1.29
SH2D3A-201ENST00000245908 PCDHB2Q9Y5E7 798 aa23.11■■□□□ 1.29
SH2D3A-201ENST00000245908 PHIPQ8WWQ0 1821 aa23.11■■□□□ 1.29
SH2D3A-201ENST00000245908 CHN1P15882 459 aa23.11■■□□□ 1.29
SH2D3A-201ENST00000245908 SCP2P22307 547 aa23.11■■□□□ 1.29
SH2D3A-201ENST00000245908 PRKCEQ02156 737 aa23.11■■□□□ 1.29
SH2D3A-201ENST00000245908 CALCOCO2Q13137 446 aa23.11■■□□□ 1.29
SH2D3A-201ENST00000245908 PSMD6Q15008 389 aa23.11■■□□□ 1.29
SH2D3A-201ENST00000245908 AEBP2Q6ZN18 517 aaPredicted RBP23.11■■□□□ 1.29
SH2D3A-201ENST00000245908 CACNA2D3Q8IZS8 1091 aa23.11■■□□□ 1.29
SH2D3A-201ENST00000245908 NSUN6Q8TEA1 469 aaKnown RBP23.11■■□□□ 1.29
SH2D3A-201ENST00000245908 MAIP1Q8WWC4 291 aa23.11■■□□□ 1.29
SH2D3A-201ENST00000245908 CHMP6Q96FZ7 201 aa23.11■■□□□ 1.29
SH2D3A-201ENST00000245908 POLR3FQ9H1D9 316 aaPredicted RBP23.11■■□□□ 1.29
SH2D3A-201ENST00000245908 JPH1Q9HDC5 661 aaPredicted RBP23.11■■□□□ 1.29
SH2D3A-201ENST00000245908 CLGNO14967 610 aa23.1■■□□□ 1.29
SH2D3A-201ENST00000245908 SLC1A1P43005 524 aa23.1■■□□□ 1.29
SH2D3A-201ENST00000245908 EN1Q05925 392 aaPredicted RBP23.1■■□□□ 1.29
SH2D3A-201ENST00000245908 ACTN3Q08043 901 aaPredicted RBP23.1■■□□□ 1.29
SH2D3A-201ENST00000245908 PLCB4Q15147 1175 aa23.1■■□□□ 1.29
SH2D3A-201ENST00000245908 TRMT10CQ7L0Y3 403 aaKnown RBP23.1■■□□□ 1.29
SH2D3A-201ENST00000245908 CCDC60Q8IWA6 550 aaPredicted RBP23.1■■□□□ 1.29
SH2D3A-201ENST00000245908 C1orf54Q8WWF1 131 aa23.1■■□□□ 1.29
SH2D3A-201ENST00000245908 ATXN2LQ8WWM7 1075 aaKnown RBP23.1■■□□□ 1.29
SH2D3A-201ENST00000245908 CABS1Q96KC9 395 aa23.1■■□□□ 1.29
SH2D3A-201ENST00000245908 STMN4Q9H169 189 aaPredicted RBP23.1■■□□□ 1.29
SH2D3A-201ENST00000245908 TELO2Q9Y4R8 837 aa23.1■■□□□ 1.29
SH2D3A-201ENST00000245908 OAZ1P54368 228 aa23.1■■□□□ 1.29
SH2D3A-201ENST00000245908 BACE1P56817 501 aa23.1■■□□□ 1.29
SH2D3A-201ENST00000245908 IFI35P80217 286 aaPredicted RBP23.1■■□□□ 1.29
SH2D3A-201ENST00000245908 KRT17Q04695 432 aa23.1■■□□□ 1.29
SH2D3A-201ENST00000245908 SNRNP48Q6IEG0 339 aaKnown RBP23.1■■□□□ 1.29
SH2D3A-201ENST00000245908 CCDC121Q6ZUS5 278 aa23.1■■□□□ 1.29
SH2D3A-201ENST00000245908 EPS8L3Q8TE67 593 aaKnown RBP23.1■■□□□ 1.29
SH2D3A-201ENST00000245908 FAM84AQ96KN4 292 aa23.1■■□□□ 1.29
SH2D3A-201ENST00000245908 SELENOSQ9BQE4 189 aa23.1■■□□□ 1.29
SH2D3A-201ENST00000245908 SLC9A2Q9UBY0 812 aa23.1■■□□□ 1.29
SH2D3A-201ENST00000245908 SMIM23A6NLE4 172 aa23.09■■□□□ 1.29
SH2D3A-201ENST00000245908 TP73O15350 636 aa23.09■■□□□ 1.29
SH2D3A-201ENST00000245908 RRM1P23921 792 aa23.09■■□□□ 1.29
SH2D3A-201ENST00000245908 BPIFB4P59827 614 aa23.09■■□□□ 1.29
SH2D3A-201ENST00000245908 CENPCQ03188 943 aa23.09■■□□□ 1.29
SH2D3A-201ENST00000245908 ZACNQ401N2 412 aa23.09■■□□□ 1.29
SH2D3A-201ENST00000245908 GKAP1Q5VSY0 366 aaPredicted RBP23.09■■□□□ 1.29
SH2D3A-201ENST00000245908 ABHD15Q6UXT9 468 aa23.09■■□□□ 1.29
SH2D3A-201ENST00000245908 SYDE1Q6ZW31 735 aaPredicted RBP23.09■■□□□ 1.29
SH2D3A-201ENST00000245908 CPLX4Q7Z7G2 160 aa23.09■■□□□ 1.29
SH2D3A-201ENST00000245908 TRIM7Q9C029 511 aa23.09■■□□□ 1.29
SH2D3A-201ENST00000245908 CYP1A1P04798 512 aaPredicted RBP23.08■■□□□ 1.29
SH2D3A-201ENST00000245908 MAN1A1P33908 653 aa23.08■■□□□ 1.29
SH2D3A-201ENST00000245908 LIG4P49917 911 aa23.08■■□□□ 1.29
SH2D3A-201ENST00000245908 ACTR2P61160 394 aa23.08■■□□□ 1.29
SH2D3A-201ENST00000245908 WDR44Q5JSH3 913 aa23.08■■□□□ 1.29
SH2D3A-201ENST00000245908 MFSD5Q6N075 450 aa23.08■■□□□ 1.29
SH2D3A-201ENST00000245908 RHBDF2Q6PJF5 856 aa23.08■■□□□ 1.29
SH2D3A-201ENST00000245908 UHMK1Q8TAS1 419 aaKnown RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms