RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 TTLL13PA6NNM8 815 aa24.97■■□□□ 1.59
MSX2-201ENST00000239243 PGRMC1O00264 195 aaKnown RBP24.97■■□□□ 1.59
MSX2-201ENST00000239243 GJC2Q5T442 439 aaPredicted RBP24.97■■□□□ 1.59
MSX2-201ENST00000239243 PRMT7Q9NVM4 692 aaPredicted RBP24.97■■□□□ 1.59
MSX2-201ENST00000239243 CPSF3Q9UKF6 684 aaKnown RBP24.97■■□□□ 1.59
MSX2-201ENST00000239243 ZNF236Q9UL36 1845 aa24.97■■□□□ 1.59
MSX2-201ENST00000239243 ABLIM1O14639 778 aa24.97■■□□□ 1.59
MSX2-201ENST00000239243 CEP104O60308 925 aa24.97■■□□□ 1.59
MSX2-201ENST00000239243 TMOD1P28289 359 aa24.97■■□□□ 1.59
MSX2-201ENST00000239243 NCOA4Q13772 614 aa24.97■■□□□ 1.59
MSX2-201ENST00000239243 TMEM132AQ24JP5 1023 aa24.97■■□□□ 1.59
MSX2-201ENST00000239243 PTPN18Q99952 460 aa24.97■■□□□ 1.59
MSX2-201ENST00000239243 TINF2Q9BSI4 451 aa24.97■■□□□ 1.59
MSX2-201ENST00000239243 ACP6Q9NPH0 428 aa24.97■■□□□ 1.59
MSX2-201ENST00000239243 STIM2Q9P246 746 aa24.97■■□□□ 1.59
MSX2-201ENST00000239243 GTF3C4Q9UKN8 822 aa24.97■■□□□ 1.59
MSX2-201ENST00000239243 SLC15A5A6NIM6 579 aa24.96■■□□□ 1.59
MSX2-201ENST00000239243 SMYD5Q6GMV2 418 aa24.96■■□□□ 1.59
MSX2-201ENST00000239243 CCNI2Q6ZMN8 369 aaPredicted RBP24.96■■□□□ 1.59
MSX2-201ENST00000239243 RASGEF1CQ8N431 466 aa24.96■■□□□ 1.59
MSX2-201ENST00000239243 OR5B17Q8NGF7 314 aa24.96■■□□□ 1.59
MSX2-201ENST00000239243 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.96■■□□□ 1.59
MSX2-201ENST00000239243 COG5Q9UP83 839 aa24.96■■□□□ 1.59
MSX2-201ENST00000239243 CLTAP09496 248 aa24.96■■□□□ 1.59
MSX2-201ENST00000239243 TNFSF9P41273 254 aa24.96■■□□□ 1.59
MSX2-201ENST00000239243 PLA2G4AP47712 749 aa24.96■■□□□ 1.59
MSX2-201ENST00000239243 NOP14P78316 857 aaKnown RBP24.96■■□□□ 1.59
MSX2-201ENST00000239243 IGBP1P78318 339 aa24.96■■□□□ 1.59
MSX2-201ENST00000239243 MBTD1Q05BQ5 628 aa24.96■■□□□ 1.59
MSX2-201ENST00000239243 GPS2Q13227 327 aa24.96■■□□□ 1.59
MSX2-201ENST00000239243 CLUL1Q15846 466 aa24.96■■□□□ 1.59
MSX2-201ENST00000239243 ZNF568Q3ZCX4 644 aa24.96■■□□□ 1.59
MSX2-201ENST00000239243 DUSP28Q4G0W2 176 aa24.96■■□□□ 1.59
MSX2-201ENST00000239243 SEZ6Q53EL9 994 aa24.96■■□□□ 1.59
MSX2-201ENST00000239243 ACAD10Q6JQN1 1059 aa24.96■■□□□ 1.59
MSX2-201ENST00000239243 FAM84AQ96KN4 292 aa24.96■■□□□ 1.59
MSX2-201ENST00000239243 PTPRHQ9HD43 1115 aa24.96■■□□□ 1.59
MSX2-201ENST00000239243 TMEM59LQ9UK28 342 aa24.96■■□□□ 1.59
MSX2-201ENST00000239243 TNFSF13BQ9Y275 285 aa24.96■■□□□ 1.59
MSX2-201ENST00000239243 MIF4GDA9UHW6 222 aaKnown RBP24.95■■□□□ 1.58
MSX2-201ENST00000239243 FAM187BQ17R55 369 aa24.95■■□□□ 1.58
MSX2-201ENST00000239243 DUOXA2Q1HG44 320 aa24.95■■□□□ 1.58
MSX2-201ENST00000239243 CLEC16AQ2KHT3 1053 aa24.95■■□□□ 1.58
MSX2-201ENST00000239243 IFNLR1Q8IU57 520 aaPredicted RBP24.95■■□□□ 1.58
MSX2-201ENST00000239243 UVRAGQ9P2Y5 699 aa24.95■■□□□ 1.58
MSX2-201ENST00000239243 ZSWIM8A7E2V4 1837 aa24.95■■□□□ 1.58
MSX2-201ENST00000239243 CYP1A2P05177 515 aa24.94■■□□□ 1.58
MSX2-201ENST00000239243 IQSEC1Q6DN90 963 aa24.94■■□□□ 1.58
MSX2-201ENST00000239243 C16orf70Q9BSU1 422 aa24.94■■□□□ 1.58
MSX2-201ENST00000239243 CARD9Q9H257 536 aa24.94■■□□□ 1.58
MSX2-201ENST00000239243 ACBD3Q9H3P7 528 aa24.94■■□□□ 1.58
MSX2-201ENST00000239243 H3BRB1 525 aa24.94■■□□□ 1.58
MSX2-201ENST00000239243 TNFRSF8P28908 595 aa24.94■■□□□ 1.58
MSX2-201ENST00000239243 ACVR2BQ13705 512 aa24.94■■□□□ 1.58
MSX2-201ENST00000239243 LINC01465Q8N7H1 131 aa24.94■■□□□ 1.58
MSX2-201ENST00000239243 ELMO3Q96BJ8 720 aa24.94■■□□□ 1.58
MSX2-201ENST00000239243 ZNF653Q96CK0 615 aa24.94■■□□□ 1.58
MSX2-201ENST00000239243 TUT1Q9H6E5 874 aaKnown RBP24.94■■□□□ 1.58
MSX2-201ENST00000239243 TTC7AQ9ULT0 858 aaPredicted RBP24.94■■□□□ 1.58
MSX2-201ENST00000239243 CCDC188H7C350 402 aa24.93■■□□□ 1.58
MSX2-201ENST00000239243 CLSTN1O94985 981 aa24.93■■□□□ 1.58
MSX2-201ENST00000239243 GJB1P08034 283 aa24.93■■□□□ 1.58
MSX2-201ENST00000239243 HOXD8P13378 290 aaPredicted RBP24.93■■□□□ 1.58
MSX2-201ENST00000239243 ACO1P21399 889 aaKnown RBP24.93■■□□□ 1.58
MSX2-201ENST00000239243 CASP8Q14790 479 aa24.93■■□□□ 1.58
MSX2-201ENST00000239243 SPOPLQ6IQ16 392 aa24.93■■□□□ 1.58
MSX2-201ENST00000239243 TRIM11Q96F44 468 aa24.93■■□□□ 1.58
MSX2-201ENST00000239243 RPS6KC1Q96S38 1066 aa24.93■■□□□ 1.58
MSX2-201ENST00000239243 APOBEC3GQ9HC16 384 aaKnown RBP24.93■■□□□ 1.58
MSX2-201ENST00000239243 DMGDHQ9UI17 866 aaKnown RBP24.93■■□□□ 1.58
MSX2-201ENST00000239243 CNTN6Q9UQ52 1028 aa24.93■■□□□ 1.58
MSX2-201ENST00000239243 ZNF286BP0CG31 522 aa24.93■■□□□ 1.58
MSX2-201ENST00000239243 IRF5Q13568 498 aa24.93■■□□□ 1.58
MSX2-201ENST00000239243 PTPROQ16827 1216 aa24.93■■□□□ 1.58
MSX2-201ENST00000239243 PPP1R2P3Q6NXS1 205 aa24.93■■□□□ 1.58
MSX2-201ENST00000239243 TRIM72Q6ZMU5 477 aa24.93■■□□□ 1.58
MSX2-201ENST00000239243 NOC2LQ9Y3T9 749 aaKnown RBP24.93■■□□□ 1.58
MSX2-201ENST00000239243 PCDHB4Q9Y5E5 795 aa24.93■■□□□ 1.58
MSX2-201ENST00000239243 A0A0U1RQG5 324 aaPredicted RBP24.92■■□□□ 1.58
MSX2-201ENST00000239243 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.92■■□□□ 1.58
MSX2-201ENST00000239243 ASS1P00966 412 aaKnown RBP24.92■■□□□ 1.58
MSX2-201ENST00000239243 UBL4BQ8N7F7 174 aa24.92■■□□□ 1.58
MSX2-201ENST00000239243 OR6J1Q8NGC5 347 aa24.92■■□□□ 1.58
MSX2-201ENST00000239243 NAP1L3Q99457 506 aaPredicted RBP24.92■■□□□ 1.58
MSX2-201ENST00000239243 IFT122Q9HBG6 1241 aa24.92■■□□□ 1.58
MSX2-201ENST00000239243 ZCCHC17Q9NP64 241 aaKnown RBP24.92■■□□□ 1.58
MSX2-201ENST00000239243 ZHX1Q9UKY1 873 aaPredicted RBP24.92■■□□□ 1.58
MSX2-201ENST00000239243 AKT3Q9Y243 479 aa24.92■■□□□ 1.58
MSX2-201ENST00000239243 ALG6Q9Y672 507 aa24.92■■□□□ 1.58
MSX2-201ENST00000239243 SRCAPQ6ZRS2 3230 aa24.92■■□□□ 1.58
MSX2-201ENST00000239243 EVPLQ92817 2033 aa24.92■■□□□ 1.58
MSX2-201ENST00000239243 DDX3YO15523 660 aaKnown RBP24.92■■□□□ 1.58
MSX2-201ENST00000239243 ZEB2O60315 1214 aa24.92■■□□□ 1.58
MSX2-201ENST00000239243 ZMYND10O75800 440 aa24.92■■□□□ 1.58
MSX2-201ENST00000239243 IL18RAPO95256 599 aa24.92■■□□□ 1.58
MSX2-201ENST00000239243 MYBL1P10243 752 aa24.92■■□□□ 1.58
MSX2-201ENST00000239243 SMPD1P17405 629 aa24.92■■□□□ 1.58
MSX2-201ENST00000239243 RNASE9P60153 205 aaKnown RBP24.92■■□□□ 1.58
MSX2-201ENST00000239243 TNFAIP2Q03169 654 aa24.92■■□□□ 1.58
MSX2-201ENST00000239243 DGKDQ16760 1214 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms