RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 PRMT7Q9NVM4 692 aaPredicted RBP14.29□□□□□ -0.12
SLIRP-201ENST00000238688 ADGRA3Q8IWK6 1321 aa14.29□□□□□ -0.12
SLIRP-201ENST00000238688 A0A0B4J269 797 aa14.28□□□□□ -0.12
SLIRP-201ENST00000238688 C17orf102A2RUQ5 167 aa14.28□□□□□ -0.12
SLIRP-201ENST00000238688 EPOPA6NHQ4 379 aa14.28□□□□□ -0.12
SLIRP-201ENST00000238688 SOWAHDA6NJG2 315 aa14.28□□□□□ -0.12
SLIRP-201ENST00000238688 KRT86O43790 486 aa14.28□□□□□ -0.12
SLIRP-201ENST00000238688 CA3P07451 260 aa14.28□□□□□ -0.12
SLIRP-201ENST00000238688 FERP16591 822 aa14.28□□□□□ -0.12
SLIRP-201ENST00000238688 MXI1P50539 228 aa14.28□□□□□ -0.12
SLIRP-201ENST00000238688 PTENP60484 403 aa14.28□□□□□ -0.12
SLIRP-201ENST00000238688 CYP24A1Q07973 514 aa14.28□□□□□ -0.12
SLIRP-201ENST00000238688 PSMD6Q15008 389 aa14.28□□□□□ -0.12
SLIRP-201ENST00000238688 ARHGAP29Q52LW3 1261 aa14.28□□□□□ -0.12
SLIRP-201ENST00000238688 KRT39Q6A163 491 aa14.28□□□□□ -0.12
SLIRP-201ENST00000238688 CNKSR3Q6P9H4 555 aa14.28□□□□□ -0.12
SLIRP-201ENST00000238688 RAD9BQ6WBX8 426 aa14.28□□□□□ -0.12
SLIRP-201ENST00000238688 TAS1R3Q7RTX0 852 aa14.28□□□□□ -0.12
SLIRP-201ENST00000238688 PARD3BQ8TEW8 1205 aa14.28□□□□□ -0.12
SLIRP-201ENST00000238688 UBE2Q2Q8WVN8 375 aa14.28□□□□□ -0.12
SLIRP-201ENST00000238688 NRCAMQ92823 1304 aa14.28□□□□□ -0.12
SLIRP-201ENST00000238688 JAKMIP2Q96AA8 810 aa14.28□□□□□ -0.12
SLIRP-201ENST00000238688 MAP7D2Q96T17 732 aa14.28□□□□□ -0.12
SLIRP-201ENST00000238688 SH2D3AQ9BRG2 576 aa14.28□□□□□ -0.12
SLIRP-201ENST00000238688 STK33Q9BYT3 514 aa14.28□□□□□ -0.12
SLIRP-201ENST00000238688 NHEJ1Q9H9Q4 299 aaPredicted RBP14.28□□□□□ -0.12
SLIRP-201ENST00000238688 POLD4Q9HCU8 107 aa14.28□□□□□ -0.12
SLIRP-201ENST00000238688 SETD4Q9NVD3 440 aa14.28□□□□□ -0.12
SLIRP-201ENST00000238688 SUCLA2Q9P2R7 463 aaPredicted RBP14.28□□□□□ -0.12
SLIRP-201ENST00000238688 APEX2Q9UBZ4 518 aa14.28□□□□□ -0.12
SLIRP-201ENST00000238688 AGO2Q9UKV8 859 aaKnown RBP14.28□□□□□ -0.12
SLIRP-201ENST00000238688 COL4A4P53420 1690 aaPredicted RBP14.27□□□□□ -0.12
SLIRP-201ENST00000238688 LRRC53A6NM62 1247 aa14.27□□□□□ -0.13
SLIRP-201ENST00000238688 RNF225M0QZC1 329 aaPredicted RBP14.27□□□□□ -0.13
SLIRP-201ENST00000238688 RFXAPO00287 272 aa14.27□□□□□ -0.13
SLIRP-201ENST00000238688 ACKR2O00590 384 aa14.27□□□□□ -0.13
SLIRP-201ENST00000238688 KIF5CO60282 957 aa14.27□□□□□ -0.13
SLIRP-201ENST00000238688 PARNO95453 639 aaKnown RBP14.27□□□□□ -0.13
SLIRP-201ENST00000238688 INSRRP14616 1297 aa14.27□□□□□ -0.13
SLIRP-201ENST00000238688 JAM2P57087 298 aa14.27□□□□□ -0.13
SLIRP-201ENST00000238688 POLR2FP61218 127 aaKnown RBP14.27□□□□□ -0.13
SLIRP-201ENST00000238688 TAP1Q03518 808 aa14.27□□□□□ -0.13
SLIRP-201ENST00000238688 PPP2R2DQ66LE6 453 aa14.27□□□□□ -0.13
SLIRP-201ENST00000238688 SLC39A4Q6P5W5 647 aa14.27□□□□□ -0.13
SLIRP-201ENST00000238688 TSHZ1Q6ZSZ6 1077 aa14.27□□□□□ -0.13
SLIRP-201ENST00000238688 KSR1Q8IVT5 923 aa14.27□□□□□ -0.13
SLIRP-201ENST00000238688 GAS2L1Q99501 681 aaPredicted RBP14.27□□□□□ -0.13
SLIRP-201ENST00000238688 FZD8Q9H461 694 aa14.27□□□□□ -0.13
SLIRP-201ENST00000238688 DEF6Q9H4E7 631 aa14.27□□□□□ -0.13
SLIRP-201ENST00000238688 TCF20Q9UGU0 1960 aaKnown RBP14.26□□□□□ -0.13
SLIRP-201ENST00000238688 LCHNA4D1U4 455 aa14.26□□□□□ -0.13
SLIRP-201ENST00000238688 ANKRD63C9JTQ0 380 aa14.26□□□□□ -0.13
SLIRP-201ENST00000238688 CLDN3O15551 220 aa14.26□□□□□ -0.13
SLIRP-201ENST00000238688 GNAT1P11488 350 aa14.26□□□□□ -0.13
SLIRP-201ENST00000238688 MARK3P27448 753 aa14.26□□□□□ -0.13
SLIRP-201ENST00000238688 STAT1P42224 750 aa14.26□□□□□ -0.13
SLIRP-201ENST00000238688 GPC3P51654 580 aa14.26□□□□□ -0.13
SLIRP-201ENST00000238688 MCL1Q07820 350 aa14.26□□□□□ -0.13
SLIRP-201ENST00000238688 GOLGA8FQ08AF8 430 aa14.26□□□□□ -0.13
SLIRP-201ENST00000238688 GOLGA8DPQ0D2H9 430 aa14.26□□□□□ -0.13
SLIRP-201ENST00000238688 PPFIA1Q13136 1202 aa14.26□□□□□ -0.13
SLIRP-201ENST00000238688 ASIC2Q16515 512 aa14.26□□□□□ -0.13
SLIRP-201ENST00000238688 PTPN21Q16825 1174 aa14.26□□□□□ -0.13
SLIRP-201ENST00000238688 EPC2Q52LR7 807 aa14.26□□□□□ -0.13
SLIRP-201ENST00000238688 DPY19L2P1Q6NXN4 242 aa14.26□□□□□ -0.13
SLIRP-201ENST00000238688 EFCAB12Q6NXP0 572 aa14.26□□□□□ -0.13
SLIRP-201ENST00000238688 TOGARAM2Q6ZUX3 1019 aa14.26□□□□□ -0.13
SLIRP-201ENST00000238688 TRMT1LQ7Z2T5 733 aaKnown RBP14.26□□□□□ -0.13
SLIRP-201ENST00000238688 SRGAP1Q7Z6B7 1085 aa14.26□□□□□ -0.13
SLIRP-201ENST00000238688 C17orf53Q8N3J3 647 aaPredicted RBP14.26□□□□□ -0.13
SLIRP-201ENST00000238688 RNF149Q8NC42 400 aa14.26□□□□□ -0.13
SLIRP-201ENST00000238688 LMBR1Q8WVP7 490 aa14.26□□□□□ -0.13
SLIRP-201ENST00000238688 FAXDC2Q96IV6 333 aa14.26□□□□□ -0.13
SLIRP-201ENST00000238688 CALR3Q96L12 384 aaKnown RBP14.26□□□□□ -0.13
SLIRP-201ENST00000238688 INTS2Q9H0H0 1204 aaKnown RBP14.26□□□□□ -0.13
SLIRP-201ENST00000238688 TRMT1Q9NXH9 659 aaKnown RBP14.26□□□□□ -0.13
SLIRP-201ENST00000238688 MYO7AQ13402 2215 aa14.26□□□□□ -0.13
SLIRP-201ENST00000238688 ABHD14A-ACY1A0A1B0GW23 586 aa14.25□□□□□ -0.13
SLIRP-201ENST00000238688 MBLAC1A4D2B0 266 aaPredicted RBP14.25□□□□□ -0.13
SLIRP-201ENST00000238688 USP27XA6NNY8 438 aa14.25□□□□□ -0.13
SLIRP-201ENST00000238688 EPHB6O15197 1021 aa14.25□□□□□ -0.13
SLIRP-201ENST00000238688 OGTO15294 1046 aa14.25□□□□□ -0.13
SLIRP-201ENST00000238688 AKR1B10O60218 316 aa14.25□□□□□ -0.13
SLIRP-201ENST00000238688 PRKCBP05771 671 aa14.25□□□□□ -0.13
SLIRP-201ENST00000238688 PROZP22891 400 aa14.25□□□□□ -0.13
SLIRP-201ENST00000238688 THPOP40225 353 aa14.25□□□□□ -0.13
SLIRP-201ENST00000238688 KLK7P49862 253 aa14.25□□□□□ -0.13
SLIRP-201ENST00000238688 VAV2P52735 878 aa14.25□□□□□ -0.13
SLIRP-201ENST00000238688 PLEKHG4Q58EX7 1191 aa14.25□□□□□ -0.13
SLIRP-201ENST00000238688 MTHFD1LQ6UB35 978 aa14.25□□□□□ -0.13
SLIRP-201ENST00000238688 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.25□□□□□ -0.13
SLIRP-201ENST00000238688 FBXL13Q8NEE6 735 aa14.25□□□□□ -0.13
SLIRP-201ENST00000238688 DBF4BQ8NFT6 615 aa14.25□□□□□ -0.13
SLIRP-201ENST00000238688 FNBP1Q96RU3 617 aa14.25□□□□□ -0.13
SLIRP-201ENST00000238688 ACO2Q99798 780 aaKnown RBP14.25□□□□□ -0.13
SLIRP-201ENST00000238688 CRACR2AQ9BSW2 395 aa14.25□□□□□ -0.13
SLIRP-201ENST00000238688 MSTO1Q9BUK6 570 aa14.25□□□□□ -0.13
SLIRP-201ENST00000238688 KIFC3Q9BVG8 833 aa14.25□□□□□ -0.13
SLIRP-201ENST00000238688 INO80BQ9C086 356 aaPredicted RBP14.25□□□□□ -0.13
SLIRP-201ENST00000238688 FAM124BQ9H5Z6 455 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms