RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 CST5P28325 142 aaPredicted RBP16.4■□□□□ 0.22
HDHD3-201ENST00000238379 CASQ1P31415 396 aa16.4■□□□□ 0.22
HDHD3-201ENST00000238379 TERF1P54274 439 aa16.4■□□□□ 0.22
HDHD3-201ENST00000238379 BMS1Q14692 1282 aaKnown RBP16.4■□□□□ 0.22
HDHD3-201ENST00000238379 PCBP1Q15365 356 aaKnown RBP eCLIP16.4■□□□□ 0.22
HDHD3-201ENST00000238379 KCNA10Q16322 511 aa16.4■□□□□ 0.22
HDHD3-201ENST00000238379 KYAT1Q16773 422 aa16.4■□□□□ 0.22
HDHD3-201ENST00000238379 DUOXA2Q1HG44 320 aa16.4■□□□□ 0.22
HDHD3-201ENST00000238379 SCARA3Q6AZY7 606 aa16.4■□□□□ 0.22
HDHD3-201ENST00000238379 TAF2Q6P1X5 1199 aa16.4■□□□□ 0.22
HDHD3-201ENST00000238379 SLC30A5Q8TAD4 765 aa16.4■□□□□ 0.22
HDHD3-201ENST00000238379 RAET1EQ8TD07 263 aa16.4■□□□□ 0.22
HDHD3-201ENST00000238379 ERO1AQ96HE7 468 aa16.4■□□□□ 0.22
HDHD3-201ENST00000238379 TSGA10Q9BZW7 698 aa16.4■□□□□ 0.22
HDHD3-201ENST00000238379 NAGPAQ9UK23 515 aa16.4■□□□□ 0.22
HDHD3-201ENST00000238379 THSD7BQ9C0I4 1608 aa16.4■□□□□ 0.22
HDHD3-201ENST00000238379 RIOK3O14730 519 aaKnown RBP16.4■□□□□ 0.22
HDHD3-201ENST00000238379 FKTNO75072 461 aa16.4■□□□□ 0.22
HDHD3-201ENST00000238379 IL18RAPO95256 599 aa16.4■□□□□ 0.22
HDHD3-201ENST00000238379 CST3P01034 146 aaPredicted RBP16.4■□□□□ 0.22
HDHD3-201ENST00000238379 ASGR1P07306 291 aa16.4■□□□□ 0.22
HDHD3-201ENST00000238379 NCOA4Q13772 614 aa16.4■□□□□ 0.22
HDHD3-201ENST00000238379 SNX17Q15036 470 aa16.4■□□□□ 0.22
HDHD3-201ENST00000238379 WDR44Q5JSH3 913 aa16.4■□□□□ 0.22
HDHD3-201ENST00000238379 ENOSF1Q7L5Y1 443 aa16.4■□□□□ 0.22
HDHD3-201ENST00000238379 CATSPER4Q7RTX7 472 aa16.4■□□□□ 0.22
HDHD3-201ENST00000238379 TRAPPC11Q7Z392 1133 aa16.4■□□□□ 0.22
HDHD3-201ENST00000238379 VPS36Q86VN1 386 aa16.4■□□□□ 0.22
HDHD3-201ENST00000238379 EFCAB13Q8IY85 973 aa16.4■□□□□ 0.22
HDHD3-201ENST00000238379 ZNF710Q8N1W2 664 aa16.4■□□□□ 0.22
HDHD3-201ENST00000238379 ZNF296Q8WUU4 475 aaPredicted RBP16.4■□□□□ 0.22
HDHD3-201ENST00000238379 TMEM40Q8WWA1 233 aa16.4■□□□□ 0.22
HDHD3-201ENST00000238379 FAM81BQ96LP2 452 aa16.4■□□□□ 0.22
HDHD3-201ENST00000238379 MTMR12Q9C0I1 747 aa16.4■□□□□ 0.22
HDHD3-201ENST00000238379 C1orf112Q9NSG2 853 aa16.4■□□□□ 0.22
HDHD3-201ENST00000238379 DDX20Q9UHI6 824 aaKnown RBP16.4■□□□□ 0.22
HDHD3-201ENST00000238379 CENPFP49454 3210 aa16.39■□□□□ 0.21
HDHD3-201ENST00000238379 PHACTR2O75167 634 aa16.39■□□□□ 0.21
HDHD3-201ENST00000238379 HTTP42858 3142 aa16.39■□□□□ 0.21
HDHD3-201ENST00000238379 NAB2Q15742 525 aa16.39■□□□□ 0.21
HDHD3-201ENST00000238379 C10orf76Q5T2E6 689 aa16.39■□□□□ 0.21
HDHD3-201ENST00000238379 GDF6Q6KF10 455 aaPredicted RBP16.39■□□□□ 0.21
HDHD3-201ENST00000238379 ALKBH5Q6P6C2 394 aaKnown RBP16.39■□□□□ 0.21
HDHD3-201ENST00000238379 SLC35F6Q8N357 371 aa16.39■□□□□ 0.21
HDHD3-201ENST00000238379 LNX1Q8TBB1 728 aaPredicted RBP16.39■□□□□ 0.21
HDHD3-201ENST00000238379 ADPGKQ9BRR6 497 aa16.39■□□□□ 0.21
HDHD3-201ENST00000238379 APOBEC3GQ9HC16 384 aaKnown RBP16.39■□□□□ 0.21
HDHD3-201ENST00000238379 LUC7LQ9NQ29 371 aaKnown RBP16.39■□□□□ 0.21
HDHD3-201ENST00000238379 CRYBB1P53674 252 aaPredicted RBP16.38■□□□□ 0.21
HDHD3-201ENST00000238379 TFAMQ00059 246 aaKnown RBP16.38■□□□□ 0.21
HDHD3-201ENST00000238379 NCBP1Q09161 790 aaKnown RBP16.38■□□□□ 0.21
HDHD3-201ENST00000238379 SLC10A6Q3KNW5 377 aa16.38■□□□□ 0.21
HDHD3-201ENST00000238379 SPOPLQ6IQ16 392 aa16.38■□□□□ 0.21
HDHD3-201ENST00000238379 SESTD1Q86VW0 696 aa16.38■□□□□ 0.21
HDHD3-201ENST00000238379 GLYCTKQ8IVS8 523 aa16.38■□□□□ 0.21
HDHD3-201ENST00000238379 TXLNBQ8N3L3 684 aa16.38■□□□□ 0.21
HDHD3-201ENST00000238379 DHX38Q92620 1227 aaKnown RBP16.38■□□□□ 0.21
HDHD3-201ENST00000238379 ARID3AQ99856 593 aa16.38■□□□□ 0.21
HDHD3-201ENST00000238379 L2HGDHQ9H9P8 463 aa16.38■□□□□ 0.21
HDHD3-201ENST00000238379 SAGE1Q9NXZ1 904 aa16.38■□□□□ 0.21
HDHD3-201ENST00000238379 ANK1P16157 1881 aa16.38■□□□□ 0.21
HDHD3-201ENST00000238379 GRIN2DO15399 1336 aa16.38■□□□□ 0.21
HDHD3-201ENST00000238379 LACTBL1A8MY62 500 aa16.38■□□□□ 0.21
HDHD3-201ENST00000238379 ASS1P00966 412 aaKnown RBP16.38■□□□□ 0.21
HDHD3-201ENST00000238379 MYCNP04198 464 aaPredicted RBP16.38■□□□□ 0.21
HDHD3-201ENST00000238379 USP8P40818 1118 aa16.38■□□□□ 0.21
HDHD3-201ENST00000238379 DCAF4L1Q3SXM0 396 aa16.38■□□□□ 0.21
HDHD3-201ENST00000238379 PACSIN1Q9BY11 444 aa16.38■□□□□ 0.21
HDHD3-201ENST00000238379 ASB7Q9H672 318 aa16.38■□□□□ 0.21
HDHD3-201ENST00000238379 NUB1Q9Y5A7 615 aa16.38■□□□□ 0.21
HDHD3-201ENST00000238379 MACROD2A1Z1Q3 448 aa16.37■□□□□ 0.21
HDHD3-201ENST00000238379 CYP26A1O43174 497 aa16.37■□□□□ 0.21
HDHD3-201ENST00000238379 SGPL1O95470 568 aa16.37■□□□□ 0.21
HDHD3-201ENST00000238379 TMEM191BP0C7N4 346 aa16.37■□□□□ 0.21
HDHD3-201ENST00000238379 AXLP30530 894 aa16.37■□□□□ 0.21
HDHD3-201ENST00000238379 GRM5P41594 1212 aa16.37■□□□□ 0.21
HDHD3-201ENST00000238379 NOP14P78316 857 aaKnown RBP16.37■□□□□ 0.21
HDHD3-201ENST00000238379 ARHGEF6Q15052 776 aa16.37■□□□□ 0.21
HDHD3-201ENST00000238379 NOTUMQ6P988 496 aa16.37■□□□□ 0.21
HDHD3-201ENST00000238379 SLC27A1Q6PCB7 646 aa16.37■□□□□ 0.21
HDHD3-201ENST00000238379 SERINC5Q86VE9 423 aa16.37■□□□□ 0.21
HDHD3-201ENST00000238379 PCSK9Q8NBP7 692 aaKnown RBP16.37■□□□□ 0.21
HDHD3-201ENST00000238379 MYRIPQ8NFW9 859 aa16.37■□□□□ 0.21
HDHD3-201ENST00000238379 EPS8L1Q8TE68 723 aa16.37■□□□□ 0.21
HDHD3-201ENST00000238379 SLC20A1Q8WUM9 679 aa16.37■□□□□ 0.21
HDHD3-201ENST00000238379 AGPAT1Q99943 283 aa16.37■□□□□ 0.21
HDHD3-201ENST00000238379 CELF4Q9BZC1 486 aaKnown RBP16.37■□□□□ 0.21
HDHD3-201ENST00000238379 SALL4Q9UJQ4 1053 aa16.37■□□□□ 0.21
HDHD3-201ENST00000238379 NOCTQ9UK39 431 aaKnown RBP16.37■□□□□ 0.21
HDHD3-201ENST00000238379 MROH7Q68CQ1 1323 aa16.36■□□□□ 0.21
HDHD3-201ENST00000238379 NPTXRO95502 500 aa16.36■□□□□ 0.21
HDHD3-201ENST00000238379 TNNC2P02585 160 aa16.36■□□□□ 0.21
HDHD3-201ENST00000238379 NFICP08651 508 aa16.36■□□□□ 0.21
HDHD3-201ENST00000238379 MYL6P60660 151 aa16.36■□□□□ 0.21
HDHD3-201ENST00000238379 CUL2Q13617 745 aa16.36■□□□□ 0.21
HDHD3-201ENST00000238379 FAM47CQ5HY64 1035 aa16.36■□□□□ 0.21
HDHD3-201ENST00000238379 JADE1Q6IE81 842 aa16.36■□□□□ 0.21
HDHD3-201ENST00000238379 U2AF1L4Q8WU68 220 aaKnown RBP16.36■□□□□ 0.21
HDHD3-201ENST00000238379 SECISBP2LQ93073 1101 aaKnown RBP16.36■□□□□ 0.21
HDHD3-201ENST00000238379 WNT8BQ93098 351 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms