RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 TAF11Q15544 211 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 DOK7Q18PE1 504 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 CEP55Q53EZ4 464 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 ACAD10Q6JQN1 1059 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 ANKRD35Q8N283 1001 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 DDX1Q92499 740 aaKnown RBP16.53■□□□□ 0.24
DDX55-201ENST00000238146 MAML1Q92585 1016 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 ERP27Q96DN0 273 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 NAF1Q96HR8 494 aaKnown RBP16.53■□□□□ 0.24
DDX55-201ENST00000238146 ACCSQ96QU6 501 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 PAIP2Q9BPZ3 127 aaKnown RBP16.53■□□□□ 0.24
DDX55-201ENST00000238146 ZNF577Q9BSK1 485 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 LARSQ9P2J5 1176 aaKnown RBP16.53■□□□□ 0.24
DDX55-201ENST00000238146 CHKBQ9Y259 395 aa16.53■□□□□ 0.24
DDX55-201ENST00000238146 PMM2O15305 246 aa16.52■□□□□ 0.24
DDX55-201ENST00000238146 GNAZP19086 355 aa16.52■□□□□ 0.24
DDX55-201ENST00000238146 MAPK4P31152 587 aa16.52■□□□□ 0.24
DDX55-201ENST00000238146 IRX1P78414 480 aaPredicted RBP16.52■□□□□ 0.24
DDX55-201ENST00000238146 B3GNT9Q6UX72 402 aa16.52■□□□□ 0.24
DDX55-201ENST00000238146 VSIG1Q86XK7 387 aa16.52■□□□□ 0.24
DDX55-201ENST00000238146 SLC17A8Q8NDX2 589 aa16.52■□□□□ 0.24
DDX55-201ENST00000238146 ARMC2Q8NEN0 867 aa16.52■□□□□ 0.24
DDX55-201ENST00000238146 MAIP1Q8WWC4 291 aa16.52■□□□□ 0.24
DDX55-201ENST00000238146 ZNF622Q969S3 477 aaKnown RBP eCLIP16.52■□□□□ 0.246e-7■■□□□ 14.5
DDX55-201ENST00000238146 TMEM237Q96Q45 408 aa16.52■□□□□ 0.24
DDX55-201ENST00000238146 CCDC77Q9BR77 488 aa16.52■□□□□ 0.24
DDX55-201ENST00000238146 FAM167BQ9BTA0 163 aa16.52■□□□□ 0.24
DDX55-201ENST00000238146 WDR11Q9BZH6 1224 aa16.52■□□□□ 0.24
DDX55-201ENST00000238146 STARD13Q9Y3M8 1113 aa16.52■□□□□ 0.24
DDX55-201ENST00000238146 QSER1Q2KHR3 1735 aa16.52■□□□□ 0.24
DDX55-201ENST00000238146 SIPA1L1O43166 1804 aa16.52■□□□□ 0.23
DDX55-201ENST00000238146 MAGEB2O15479 319 aa16.52■□□□□ 0.23
DDX55-201ENST00000238146 ASMTLO95671 621 aa16.52■□□□□ 0.23
DDX55-201ENST00000238146 ADRB2P07550 413 aa16.52■□□□□ 0.23
DDX55-201ENST00000238146 CRKP46108 304 aa16.52■□□□□ 0.23
DDX55-201ENST00000238146 YARSP54577 528 aaKnown RBP16.52■□□□□ 0.23
DDX55-201ENST00000238146 DNAJC3Q13217 504 aa16.52■□□□□ 0.23
DDX55-201ENST00000238146 HELQQ8TDG4 1101 aa16.52■□□□□ 0.23
DDX55-201ENST00000238146 ZC3H12CQ9C0D7 883 aaKnown RBP16.52■□□□□ 0.23
DDX55-201ENST00000238146 DNAJC5Q9H3Z4 198 aa16.52■□□□□ 0.23
DDX55-201ENST00000238146 RNPEPL1Q9HAU8 725 aa16.52■□□□□ 0.23
DDX55-201ENST00000238146 GOLGA8IPA6NC78 632 aa16.51■□□□□ 0.23
DDX55-201ENST00000238146 GOLGA8JA6NMD2 632 aa16.51■□□□□ 0.23
DDX55-201ENST00000238146 TOM1O60784 492 aa16.51■□□□□ 0.23
DDX55-201ENST00000238146 TARSP26639 723 aaKnown RBP16.51■□□□□ 0.23
DDX55-201ENST00000238146 JAG1P78504 1218 aa16.51■□□□□ 0.23
DDX55-201ENST00000238146 SETDB1Q15047 1291 aa16.51■□□□□ 0.23
DDX55-201ENST00000238146 TMED2Q15363 201 aa16.51■□□□□ 0.23
DDX55-201ENST00000238146 ABCB5Q2M3G0 1257 aa16.51■□□□□ 0.23
DDX55-201ENST00000238146 RBM26Q5T8P6 1007 aaKnown RBP16.51■□□□□ 0.23
DDX55-201ENST00000238146 RELL1Q8IUW5 271 aa16.51■□□□□ 0.23
DDX55-201ENST00000238146 SPOCK2Q92563 424 aa16.51■□□□□ 0.23
DDX55-201ENST00000238146 ANKRD27Q96NW4 1050 aa16.51■□□□□ 0.23
DDX55-201ENST00000238146 FAM198AQ9UFP1 575 aa16.51■□□□□ 0.23
DDX55-201ENST00000238146 HAO1Q9UJM8 370 aa16.51■□□□□ 0.23
DDX55-201ENST00000238146 RBBP6Q7Z6E9 1792 aaKnown RBP16.51■□□□□ 0.23
DDX55-201ENST00000238146 BTAF1O14981 1849 aa16.51■□□□□ 0.23
DDX55-201ENST00000238146 PEX11AO75192 247 aa16.51■□□□□ 0.23
DDX55-201ENST00000238146 SPAG7O75391 227 aa16.51■□□□□ 0.23
DDX55-201ENST00000238146 ATP5HO75947 161 aa16.51■□□□□ 0.23
DDX55-201ENST00000238146 LUC7L3O95232 432 aaKnown RBP16.51■□□□□ 0.23
DDX55-201ENST00000238146 CALB2P22676 271 aa16.51■□□□□ 0.23
DDX55-201ENST00000238146 RNASELQ05823 741 aaKnown RBP16.51■□□□□ 0.23
DDX55-201ENST00000238146 MOGSQ13724 837 aa16.51■□□□□ 0.23
DDX55-201ENST00000238146 DDX27Q96GQ7 796 aaKnown RBP16.51■□□□□ 0.23
DDX55-201ENST00000238146 LRRC37BQ96QE4 947 aa16.51■□□□□ 0.23
DDX55-201ENST00000238146 FAM118BQ9BPY3 351 aa16.51■□□□□ 0.23
DDX55-201ENST00000238146 HEMGNQ9BXL5 484 aa16.51■□□□□ 0.23
DDX55-201ENST00000238146 ZMYND8Q9ULU4 1186 aaPredicted RBP16.51■□□□□ 0.23
DDX55-201ENST00000238146 PHTF1Q9UMS5 762 aa16.51■□□□□ 0.23
DDX55-201ENST00000238146 LRRC42Q9Y546 428 aa16.51■□□□□ 0.23
DDX55-201ENST00000238146 USH1CQ9Y6N9 552 aa16.51■□□□□ 0.23
DDX55-201ENST00000238146 LTBP1Q14766 1721 aa16.5■□□□□ 0.23
DDX55-201ENST00000238146 A6NHS1 94 aa16.5■□□□□ 0.23
DDX55-201ENST00000238146 MAPK13O15264 365 aa16.5■□□□□ 0.23
DDX55-201ENST00000238146 GM2AP17900 193 aa16.5■□□□□ 0.23
DDX55-201ENST00000238146 ALCAMQ13740 583 aa16.5■□□□□ 0.23
DDX55-201ENST00000238146 FAM182BQ5T319 152 aa16.5■□□□□ 0.23
DDX55-201ENST00000238146 SP8Q8IXZ3 490 aa16.5■□□□□ 0.23
DDX55-201ENST00000238146 AGGF1Q8N302 714 aaeCLIP16.5■□□□□ 0.23
DDX55-201ENST00000238146 DENND1AQ8TEH3 1009 aa16.5■□□□□ 0.23
DDX55-201ENST00000238146 DHX38Q92620 1227 aaKnown RBP16.5■□□□□ 0.23
DDX55-201ENST00000238146 ELMO3Q96BJ8 720 aa16.5■□□□□ 0.23
DDX55-201ENST00000238146 TEKT3Q9BXF9 490 aa16.5■□□□□ 0.23
DDX55-201ENST00000238146 SLCO1B3Q9NPD5 702 aa16.5■□□□□ 0.23
DDX55-201ENST00000238146 A0A1W2PRG0 241 aa16.5■□□□□ 0.23
DDX55-201ENST00000238146 CALCAP01258 141 aa16.5■□□□□ 0.23
DDX55-201ENST00000238146 POLR2MP0CAP2 368 aa16.5■□□□□ 0.23
DDX55-201ENST00000238146 MAPTP10636 758 aaKnown RBP16.5■□□□□ 0.23
DDX55-201ENST00000238146 KLF1Q13351 362 aaPredicted RBP16.5■□□□□ 0.23
DDX55-201ENST00000238146 CLEC16AQ2KHT3 1053 aa16.5■□□□□ 0.23
DDX55-201ENST00000238146 IZUMO3Q5VZ72 239 aa16.5■□□□□ 0.23
DDX55-201ENST00000238146 CYP4F22Q6NT55 531 aa16.5■□□□□ 0.23
DDX55-201ENST00000238146 TRABD2AQ86V40 505 aa16.5■□□□□ 0.23
DDX55-201ENST00000238146 CBWD2Q8IUF1 395 aa16.5■□□□□ 0.23
DDX55-201ENST00000238146 FAM13CQ8NE31 585 aa16.5■□□□□ 0.23
DDX55-201ENST00000238146 ZNF483Q8TF39 744 aaPredicted RBP16.5■□□□□ 0.23
DDX55-201ENST00000238146 KIAA1683Q9H0B3 1180 aa16.5■□□□□ 0.23
DDX55-201ENST00000238146 KIF9Q9HAQ2 790 aa16.5■□□□□ 0.23
DDX55-201ENST00000238146 KCNQ5Q9NR82 932 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms