RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 TRIM49CP0CI26 452 aa15.02□□□□□ -0.01
SF1-201ENST00000227503 COMTP21964 271 aa15.02□□□□□ -0.01
SF1-201ENST00000227503 COILP38432 576 aaPredicted RBP15.02□□□□□ -0.01
SF1-201ENST00000227503 CYP4A11Q02928 519 aa15.02□□□□□ -0.01
SF1-201ENST00000227503 CALCOCO2Q13137 446 aa15.02□□□□□ -0.01
SF1-201ENST00000227503 SGSM1Q2NKQ1 1148 aa15.02□□□□□ -0.01
SF1-201ENST00000227503 USH1GQ495M9 461 aa15.02□□□□□ -0.01
SF1-201ENST00000227503 TMEM63BQ5T3F8 832 aa15.02□□□□□ -0.01
SF1-201ENST00000227503 IFT43Q96FT9 208 aa15.02□□□□□ -0.01
SF1-201ENST00000227503 TMEM109Q9BVC6 243 aa15.02□□□□□ -0.01
SF1-201ENST00000227503 FAM198AQ9UFP1 575 aa15.02□□□□□ -0.01
SF1-201ENST00000227503 DNAJC12Q9UKB3 198 aa15.02□□□□□ -0.01
SF1-201ENST00000227503 STK24Q9Y6E0 443 aa15.02□□□□□ -0.01
SF1-201ENST00000227503 EML1O00423 815 aa15.01□□□□□ -0.01
SF1-201ENST00000227503 TGFB1I1O43294 461 aa15.01□□□□□ -0.01
SF1-201ENST00000227503 THAP12O43422 761 aa15.01□□□□□ -0.01
SF1-201ENST00000227503 PIAS1O75925 651 aa15.01□□□□□ -0.01
SF1-201ENST00000227503 FOSP01100 380 aaPredicted RBP15.01□□□□□ -0.01
SF1-201ENST00000227503 NEK3P51956 506 aa15.01□□□□□ -0.01
SF1-201ENST00000227503 DRG2P55039 364 aaKnown RBP15.01□□□□□ -0.01
SF1-201ENST00000227503 PARP6Q2NL67 630 aa15.01□□□□□ -0.01
SF1-201ENST00000227503 CYP4F22Q6NT55 531 aa15.01□□□□□ -0.01
SF1-201ENST00000227503 TATDN1Q6P1N9 297 aa15.01□□□□□ -0.01
SF1-201ENST00000227503 NSMFQ6X4W1 530 aa15.01□□□□□ -0.01
SF1-201ENST00000227503 FBXO11Q86XK2 927 aa15.01□□□□□ -0.01
SF1-201ENST00000227503 KBTBD2Q8IY47 623 aa15.01□□□□□ -0.01
SF1-201ENST00000227503 C4orf33Q8N1A6 199 aa15.01□□□□□ -0.01
SF1-201ENST00000227503 AGGF1Q8N302 714 aaeCLIP15.01□□□□□ -0.01
SF1-201ENST00000227503 MAIP1Q8WWC4 291 aa15.01□□□□□ -0.01
SF1-201ENST00000227503 PRR11Q96HE9 360 aaPredicted RBP15.01□□□□□ -0.01
SF1-201ENST00000227503 POLR3CQ9BUI4 534 aaPredicted RBP15.01□□□□□ -0.01
SF1-201ENST00000227503 MOV10L1Q9BXT6 1211 aaKnown RBP15.01□□□□□ -0.01
SF1-201ENST00000227503 DCTN4Q9UJW0 460 aa15.01□□□□□ -0.01
SF1-201ENST00000227503 WDR91A4D1P6 747 aa15.01□□□□□ -0.01
SF1-201ENST00000227503 GCNT3O95395 438 aa15.01□□□□□ -0.01
SF1-201ENST00000227503 EYA4O95677 639 aa15.01□□□□□ -0.01
SF1-201ENST00000227503 CYP1A1P04798 512 aaPredicted RBP15.01□□□□□ -0.01
SF1-201ENST00000227503 TMEM253P0C7T8 217 aa15.01□□□□□ -0.01
SF1-201ENST00000227503 RPL13P26373 211 aaKnown RBP15.01□□□□□ -0.01
SF1-201ENST00000227503 KRT17Q04695 432 aa15.01□□□□□ -0.01
SF1-201ENST00000227503 KPNB1Q14974 876 aaKnown RBP15.01□□□□□ -0.01
SF1-201ENST00000227503 LRRC23Q53EV4 343 aaPredicted RBP15.01□□□□□ -0.01
SF1-201ENST00000227503 SYCP3Q8IZU3 236 aa15.01□□□□□ -0.01
SF1-201ENST00000227503 FAM81AQ8TBF8 368 aa15.01□□□□□ -0.01
SF1-201ENST00000227503 EIF2AK1Q9BQI3 630 aaKnown RBP15.01□□□□□ -0.01
SF1-201ENST00000227503 VCXQ9H320 206 aa15.01□□□□□ -0.01
SF1-201ENST00000227503 PI4KBQ9UBF8 816 aa15.01□□□□□ -0.01
SF1-201ENST00000227503 WASF2Q9Y6W5 498 aa15.01□□□□□ -0.01
SF1-201ENST00000227503 NCANO14594 1321 aa15□□□□□ -0.01
SF1-201ENST00000227503 A0A1W2PRG0 241 aa15□□□□□ -0.01
SF1-201ENST00000227503 GTPBP10A4D1E9 387 aaKnown RBP15□□□□□ -0.01
SF1-201ENST00000227503 SIGLEC16A6NMB1 481 aa15□□□□□ -0.01
SF1-201ENST00000227503 RASA4BC9J798 803 aa15□□□□□ -0.01
SF1-201ENST00000227503 CAPN9O14815 690 aa15□□□□□ -0.01
SF1-201ENST00000227503 CLDN3O15551 220 aa15□□□□□ -0.01
SF1-201ENST00000227503 RASA4O43374 803 aa15□□□□□ -0.01
SF1-201ENST00000227503 TNFAIP3P21580 790 aa15□□□□□ -0.01
SF1-201ENST00000227503 GSTT1P30711 240 aa15□□□□□ -0.01
SF1-201ENST00000227503 SOX5P35711 763 aa15□□□□□ -0.01
SF1-201ENST00000227503 SKIV2L2P42285 1042 aaKnown RBP15□□□□□ -0.01
SF1-201ENST00000227503 NPEPPSP55786 919 aa15□□□□□ -0.01
SF1-201ENST00000227503 OVGP1Q12889 678 aa15□□□□□ -0.01
SF1-201ENST00000227503 ENDOVQ8N8Q3 282 aaKnown RBP15□□□□□ -0.01
SF1-201ENST00000227503 GMCL1P1Q8NEA9 526 aa15□□□□□ -0.01
SF1-201ENST00000227503 GMCL1Q96IK5 515 aa15□□□□□ -0.01
SF1-201ENST00000227503 GJD4Q96KN9 370 aaPredicted RBP15□□□□□ -0.01
SF1-201ENST00000227503 C12orf65Q9H3J6 166 aaKnown RBP15□□□□□ -0.01
SF1-201ENST00000227503 OLFML3Q9NRN5 406 aa15□□□□□ -0.01
SF1-201ENST00000227503 PCYOX1Q9UHG3 505 aa15□□□□□ -0.01
SF1-201ENST00000227503 ZMYM2Q9UBW7 1377 aa15□□□□□ -0.01
SF1-201ENST00000227503 ANKRD31Q8N7Z5 1873 aa15□□□□□ -0.01
SF1-201ENST00000227503 NDUFB10O96000 172 aa15□□□□□ -0.01
SF1-201ENST00000227503 FGFR1P11362 822 aa15□□□□□ -0.01
SF1-201ENST00000227503 HOXA13P31271 388 aaPredicted RBP15□□□□□ -0.01
SF1-201ENST00000227503 COG2Q14746 738 aa15□□□□□ -0.01
SF1-201ENST00000227503 ACSBG2Q5FVE4 666 aa15□□□□□ -0.01
SF1-201ENST00000227503 SYDE2Q5VT97 1194 aa15□□□□□ -0.01
SF1-201ENST00000227503 RINT1Q6NUQ1 792 aa15□□□□□ -0.01
SF1-201ENST00000227503 ZFAND2BQ8WV99 257 aa15□□□□□ -0.01
SF1-201ENST00000227503 SERPINB12Q96P63 405 aa15□□□□□ -0.01
SF1-201ENST00000227503 UBN1Q9NPG3 1134 aa15□□□□□ -0.01
SF1-201ENST00000227503 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15□□□□□ -0.018e-7■■□□□ 12.2
SF1-201ENST00000227503 PODXLO00592 558 aa14.99□□□□□ -0.01
SF1-201ENST00000227503 TBX10O75333 385 aa14.99□□□□□ -0.01
SF1-201ENST00000227503 TBCAO75347 108 aaKnown RBP14.99□□□□□ -0.01
SF1-201ENST00000227503 YY1P25490 414 aa14.99□□□□□ -0.01
SF1-201ENST00000227503 CTNNA2P26232 953 aa14.99□□□□□ -0.01
SF1-201ENST00000227503 EAPPQ56P03 285 aaPredicted RBP14.99□□□□□ -0.01
SF1-201ENST00000227503 MTDHQ86UE4 582 aaKnown RBP14.99□□□□□ -0.01
SF1-201ENST00000227503 RDH13Q8NBN7 331 aa14.99□□□□□ -0.01
SF1-201ENST00000227503 ZSWIM1Q9BR11 485 aa14.99□□□□□ -0.01
SF1-201ENST00000227503 IDI2Q9BXS1 227 aa14.99□□□□□ -0.01
SF1-201ENST00000227503 NPHS2Q9NP85 383 aa14.99□□□□□ -0.01
SF1-201ENST00000227503 RABGAP1Q9Y3P9 1069 aa14.99□□□□□ -0.01
SF1-201ENST00000227503 NRXN2Q9P2S2 1712 aa14.99□□□□□ -0.01
SF1-201ENST00000227503 PASKQ96RG2 1323 aa14.99□□□□□ -0.01
SF1-201ENST00000227503 CYP3A4P08684 503 aa14.99□□□□□ -0.01
SF1-201ENST00000227503 ITGA8P53708 1063 aa14.99□□□□□ -0.01
SF1-201ENST00000227503 CBWD6Q4V339 395 aa14.99□□□□□ -0.01
SF1-201ENST00000227503 CBWD3Q5JTY5 395 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms