RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 H0YCG3 227 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 CRCPO75575 148 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 ALDH18A1P54886 795 aaKnown RBP14.56□□□□□ -0.08
NFKB1-201ENST00000226574 YWHAEP62258 255 aaKnown RBP14.56□□□□□ -0.08
NFKB1-201ENST00000226574 MMEL1Q495T6 779 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.56□□□□□ -0.08
NFKB1-201ENST00000226574 SNRNP48Q6IEG0 339 aaKnown RBP14.56□□□□□ -0.08
NFKB1-201ENST00000226574 CRLF3Q8IUI8 442 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 C4orf32Q8N8J7 132 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 HAS1Q92839 578 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 TMEM237Q96Q45 408 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 POLR3FQ9H1D9 316 aaPredicted RBP14.56□□□□□ -0.08
NFKB1-201ENST00000226574 POLRMTO00411 1230 aaKnown RBP14.55□□□□□ -0.08
NFKB1-201ENST00000226574 PSAPP07602 524 aa14.55□□□□□ -0.08
NFKB1-201ENST00000226574 P4HA1P13674 534 aa14.55□□□□□ -0.08
NFKB1-201ENST00000226574 CDH6P55285 790 aa14.55□□□□□ -0.08
NFKB1-201ENST00000226574 COPS2P61201 443 aa14.55□□□□□ -0.08
NFKB1-201ENST00000226574 STAT4Q14765 748 aa14.55□□□□□ -0.08
NFKB1-201ENST00000226574 RABGAP1LQ5R372 815 aa14.55□□□□□ -0.08
NFKB1-201ENST00000226574 SPOPLQ6IQ16 392 aa14.55□□□□□ -0.08
NFKB1-201ENST00000226574 TRMT10CQ7L0Y3 403 aaKnown RBP14.55□□□□□ -0.08
NFKB1-201ENST00000226574 PTF1AQ7RTS3 328 aa14.55□□□□□ -0.08
NFKB1-201ENST00000226574 IQCKQ8N0W5 287 aa14.55□□□□□ -0.08
NFKB1-201ENST00000226574 DEPDC1BQ8WUY9 529 aa14.55□□□□□ -0.08
NFKB1-201ENST00000226574 FAM81BQ96LP2 452 aa14.55□□□□□ -0.08
NFKB1-201ENST00000226574 FAM129AQ9BZQ8 928 aa14.55□□□□□ -0.08
NFKB1-201ENST00000226574 KRT4P19013 534 aa14.55□□□□□ -0.08
NFKB1-201ENST00000226574 PGM1P36871 562 aa14.55□□□□□ -0.08
NFKB1-201ENST00000226574 PSMC5P62195 406 aa14.55□□□□□ -0.08
NFKB1-201ENST00000226574 RNASELQ05823 741 aaKnown RBP14.55□□□□□ -0.08
NFKB1-201ENST00000226574 WDR72Q3MJ13 1102 aa14.55□□□□□ -0.08
NFKB1-201ENST00000226574 CYP4A22Q5TCH4 519 aa14.55□□□□□ -0.08
NFKB1-201ENST00000226574 RGS9BPQ6ZS82 235 aa14.55□□□□□ -0.08
NFKB1-201ENST00000226574 FAM160B2Q86V87 743 aa14.55□□□□□ -0.08
NFKB1-201ENST00000226574 NUDCD3Q8IVD9 361 aa14.55□□□□□ -0.08
NFKB1-201ENST00000226574 ADPGKQ9BRR6 497 aa14.55□□□□□ -0.08
NFKB1-201ENST00000226574 ZNF277Q9NRM2 450 aaPredicted RBP14.55□□□□□ -0.08
NFKB1-201ENST00000226574 DLGAP2Q9P1A6 1054 aa14.55□□□□□ -0.08
NFKB1-201ENST00000226574 UBE4BO95155 1302 aa14.55□□□□□ -0.08
NFKB1-201ENST00000226574 RPS6KA2Q15349 733 aa14.55□□□□□ -0.08
NFKB1-201ENST00000226574 ZNF699Q32M78 642 aa14.55□□□□□ -0.08
NFKB1-201ENST00000226574 DNAJC19Q96DA6 116 aa14.55□□□□□ -0.08
NFKB1-201ENST00000226574 MED10Q9BTT4 135 aa14.55□□□□□ -0.08
NFKB1-201ENST00000226574 PFDN1O60925 122 aa14.54□□□□□ -0.08
NFKB1-201ENST00000226574 GPC4O75487 556 aa14.54□□□□□ -0.08
NFKB1-201ENST00000226574 BAATQ14032 418 aaPredicted RBP14.54□□□□□ -0.08
NFKB1-201ENST00000226574 SHROOM1Q2M3G4 852 aaPredicted RBP14.54□□□□□ -0.08
NFKB1-201ENST00000226574 ZNF667Q5HYK9 610 aa14.54□□□□□ -0.08
NFKB1-201ENST00000226574 TUFT1Q9NNX1 390 aa14.54□□□□□ -0.08
NFKB1-201ENST00000226574 RARAP10276 462 aa14.54□□□□□ -0.08
NFKB1-201ENST00000226574 NQO1P15559 274 aaKnown RBP14.54□□□□□ -0.08
NFKB1-201ENST00000226574 PAX7P23759 505 aa14.54□□□□□ -0.08
NFKB1-201ENST00000226574 HMGB2P26583 209 aaKnown RBP14.54□□□□□ -0.08
NFKB1-201ENST00000226574 HOXA7P31268 230 aaPredicted RBP14.54□□□□□ -0.08
NFKB1-201ENST00000226574 ITKQ08881 620 aa14.54□□□□□ -0.08
NFKB1-201ENST00000226574 ITGB3BPQ13352 177 aaPredicted RBP14.54□□□□□ -0.08
NFKB1-201ENST00000226574 FAM102AQ5T9C2 384 aaPredicted RBP14.54□□□□□ -0.08
NFKB1-201ENST00000226574 MIS18BP1Q6P0N0 1132 aa14.54□□□□□ -0.08
NFKB1-201ENST00000226574 SLC51AQ86UW1 340 aa14.54□□□□□ -0.08
NFKB1-201ENST00000226574 PRPF38AQ8NAV1 312 aaKnown RBP14.54□□□□□ -0.08
NFKB1-201ENST00000226574 TATDN2Q93075 761 aa14.54□□□□□ -0.08
NFKB1-201ENST00000226574 INPP4AQ96PE3 977 aaPredicted RBP14.54□□□□□ -0.08
NFKB1-201ENST00000226574 THTPAQ9BU02 230 aa14.54□□□□□ -0.08
NFKB1-201ENST00000226574 TARS2Q9BW92 718 aaKnown RBP14.54□□□□□ -0.08
NFKB1-201ENST00000226574 ANLNQ9NQW6 1124 aa14.54□□□□□ -0.08
NFKB1-201ENST00000226574 PCDHGC5Q9Y5F6 944 aa14.54□□□□□ -0.08
NFKB1-201ENST00000226574 TRAPPC3O43617 180 aa14.54□□□□□ -0.08
NFKB1-201ENST00000226574 CST8O60676 142 aa14.54□□□□□ -0.08
NFKB1-201ENST00000226574 RARGP13631 454 aa14.54□□□□□ -0.08
NFKB1-201ENST00000226574 TNFAIP1Q13829 316 aa14.54□□□□□ -0.08
NFKB1-201ENST00000226574 MAP7Q14244 749 aa14.54□□□□□ -0.08
NFKB1-201ENST00000226574 NPY5RQ15761 445 aa14.54□□□□□ -0.08
NFKB1-201ENST00000226574 GPD1LQ8N335 351 aa14.54□□□□□ -0.08
NFKB1-201ENST00000226574 MTMR9Q96QG7 549 aa14.54□□□□□ -0.08
NFKB1-201ENST00000226574 UNC45AQ9H3U1 944 aa14.54□□□□□ -0.08
NFKB1-201ENST00000226574 C10orf88Q9H8K7 445 aa14.54□□□□□ -0.08
NFKB1-201ENST00000226574 RAB6BQ9NRW1 208 aa14.54□□□□□ -0.08
NFKB1-201ENST00000226574 UVRAGQ9P2Y5 699 aa14.54□□□□□ -0.08
NFKB1-201ENST00000226574 ZHX2Q9Y6X8 837 aa14.54□□□□□ -0.08
NFKB1-201ENST00000226574 NWD1Q149M9 1564 aa14.54□□□□□ -0.08
NFKB1-201ENST00000226574 SPECC1L-ADORA2AF8WAN1 911 aa14.53□□□□□ -0.08
NFKB1-201ENST00000226574 PJA2O43164 708 aa14.53□□□□□ -0.08
NFKB1-201ENST00000226574 GSTA1P08263 222 aa14.53□□□□□ -0.08
NFKB1-201ENST00000226574 GSTA2P09210 222 aa14.53□□□□□ -0.08
NFKB1-201ENST00000226574 RGS7P49802 495 aa14.53□□□□□ -0.08
NFKB1-201ENST00000226574 SESN2P58004 480 aaPredicted RBP14.53□□□□□ -0.08
NFKB1-201ENST00000226574 PTENP60484 403 aa14.53□□□□□ -0.08
NFKB1-201ENST00000226574 SKOR1P84550 965 aa14.53□□□□□ -0.08
NFKB1-201ENST00000226574 ALCAMQ13740 583 aa14.53□□□□□ -0.08
NFKB1-201ENST00000226574 ZNF720Q7Z2F6 126 aa14.53□□□□□ -0.08
NFKB1-201ENST00000226574 ATP11CQ8NB49 1132 aa14.53□□□□□ -0.08
NFKB1-201ENST00000226574 BCAS3Q9H6U6 928 aa14.53□□□□□ -0.08
NFKB1-201ENST00000226574 KCNQ5Q9NR82 932 aa14.53□□□□□ -0.08
NFKB1-201ENST00000226574 TBC1D22BQ9NU19 505 aa14.53□□□□□ -0.08
NFKB1-201ENST00000226574 KCNG1Q9UIX4 513 aa14.53□□□□□ -0.08
NFKB1-201ENST00000226574 HLA-DRAP01903 254 aa14.53□□□□□ -0.08
NFKB1-201ENST00000226574 UBTFL6P0CB48 400 aaPredicted RBP14.53□□□□□ -0.08
NFKB1-201ENST00000226574 MX2P20592 715 aa14.53□□□□□ -0.08
NFKB1-201ENST00000226574 CAV1Q03135 178 aa14.53□□□□□ -0.08
NFKB1-201ENST00000226574 ARHGEF19Q8IW93 802 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms