RNA–Protein interactions for RNA: ENST00000221573.10

SNAPC2-201, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-201ENST00000221573 BORCS6Q96GS4 357 aa21.1■□□□□ 0.97
SNAPC2-201ENST00000221573 POP1Q99575 1024 aaKnown RBP21.1■□□□□ 0.97
SNAPC2-201ENST00000221573 BPIFA3Q9BQP9 254 aa21.1■□□□□ 0.97
SNAPC2-201ENST00000221573 MRPL9Q9BYD2 267 aaKnown RBP21.1■□□□□ 0.97
SNAPC2-201ENST00000221573 DDHD2O94830 711 aa21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 DLATP10515 647 aaKnown RBP21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 DLG4P78352 724 aa21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 RNASELQ05823 741 aaKnown RBP21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 SOX4Q06945 474 aaPredicted RBP21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 NCAPHQ15003 741 aa21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 CCDC40Q4G0X9 1142 aa21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 IRF2BP1Q8IU81 584 aa21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 DHX40Q8IX18 779 aaKnown RBP21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 SP7Q8TDD2 431 aaPredicted RBP21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 PARD3BQ8TEW8 1205 aa21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 C18orf25Q96B23 403 aaPredicted RBP21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 PBX4Q9BYU1 374 aa21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 TSPY26PQ9H489 355 aa21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 GOLGA2P5Q9HBQ8 144 aa21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 SAMSN1Q9NSI8 373 aaKnown RBP21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 KANSL3Q9P2N6 904 aa21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 CACNG4Q9UBN1 327 aa21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 TUBGCP4Q9UGJ1 667 aa21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 YBX2Q9Y2T7 364 aaKnown RBP21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 MRPL42Q9Y6G3 142 aaKnown RBP21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 LRRIQ3A6PVS8 624 aaPredicted RBP21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 ARHGEF15O94989 841 aa21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 BFSP1Q12934 665 aa21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 TMEM132DQ14C87 1099 aa21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 INTS8Q75QN2 995 aaKnown RBP21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 RSPH1Q8WYR4 309 aa21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 CNOT6LQ96LI5 555 aaKnown RBP21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 FNBP1Q96RU3 617 aa21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 THAP9Q9H5L6 903 aa21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 CWH43Q9H720 699 aa21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 NRDE2Q9H7Z3 1164 aa21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 CBX8Q9HC52 389 aa21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 DNAJB4Q9UDY4 337 aa21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 PCDHA11Q9Y5I1 949 aa21.09■□□□□ 0.97
SNAPC2-201ENST00000221573 TRIOBPQ9H2D6 2365 aa21.08■□□□□ 0.97
SNAPC2-201ENST00000221573 FGFR1OPO95684 399 aaKnown RBP21.08■□□□□ 0.96
SNAPC2-201ENST00000221573 TRIM49P0CI25 452 aa21.08■□□□□ 0.96
SNAPC2-201ENST00000221573 TRIM49CP0CI26 452 aa21.08■□□□□ 0.96
SNAPC2-201ENST00000221573 KRT13P13646 458 aa21.08■□□□□ 0.96
SNAPC2-201ENST00000221573 VAMP7P51809 220 aa21.08■□□□□ 0.96
SNAPC2-201ENST00000221573 GUCY2FP51841 1108 aa21.08■□□□□ 0.96
SNAPC2-201ENST00000221573 IQCB1Q15051 598 aa21.08■□□□□ 0.96
SNAPC2-201ENST00000221573 SURF1Q15526 300 aa21.08■□□□□ 0.96
SNAPC2-201ENST00000221573 ZBTB6Q15916 424 aa21.08■□□□□ 0.96
SNAPC2-201ENST00000221573 C1orf220Q5T0J3 134 aa21.08■□□□□ 0.96
SNAPC2-201ENST00000221573 CGRRF1Q99675 332 aa21.08■□□□□ 0.96
SNAPC2-201ENST00000221573 C2CD2Q9Y426 696 aa21.08■□□□□ 0.96
SNAPC2-201ENST00000221573 A0A1W2PPC1 479 aa21.07■□□□□ 0.96
SNAPC2-201ENST00000221573 CASTOR2A6NHX0 329 aa21.07■□□□□ 0.96
SNAPC2-201ENST00000221573 ZC3H11AO75152 810 aaKnown RBP eCLIP21.07■□□□□ 0.96
SNAPC2-201ENST00000221573 CA3P07451 260 aa21.07■□□□□ 0.96
SNAPC2-201ENST00000221573 LINC00271P0C7V0 271 aa21.07■□□□□ 0.96
SNAPC2-201ENST00000221573 TNNI1P19237 187 aa21.07■□□□□ 0.96
SNAPC2-201ENST00000221573 TFAMQ00059 246 aaKnown RBP21.07■□□□□ 0.96
SNAPC2-201ENST00000221573 DSC1Q08554 894 aa21.07■□□□□ 0.96
SNAPC2-201ENST00000221573 FRMD5Q7Z6J6 570 aa21.07■□□□□ 0.96
SNAPC2-201ENST00000221573 WDR49Q8IV35 697 aa21.07■□□□□ 0.96
SNAPC2-201ENST00000221573 FIBCD1Q8N539 461 aa21.07■□□□□ 0.96
SNAPC2-201ENST00000221573 OR5B17Q8NGF7 314 aa21.07■□□□□ 0.96
SNAPC2-201ENST00000221573 TMC2Q8TDI7 906 aa21.07■□□□□ 0.96
SNAPC2-201ENST00000221573 MTMR12Q9C0I1 747 aa21.07■□□□□ 0.96
SNAPC2-201ENST00000221573 FANCLQ9NW38 375 aa21.07■□□□□ 0.96
SNAPC2-201ENST00000221573 ARMCX3Q9UH62 379 aaPredicted RBP21.07■□□□□ 0.96
SNAPC2-201ENST00000221573 UBQLN1Q9UMX0 589 aaKnown RBP21.07■□□□□ 0.96
SNAPC2-201ENST00000221573 DERAQ9Y315 318 aa21.07■□□□□ 0.96
SNAPC2-201ENST00000221573 SCN1AP35498 2009 aa21.06■□□□□ 0.96
SNAPC2-201ENST00000221573 IKBKBO14920 756 aa21.06■□□□□ 0.96
SNAPC2-201ENST00000221573 PBX3P40426 434 aa21.06■□□□□ 0.96
SNAPC2-201ENST00000221573 MARSP56192 900 aaKnown RBP21.06■□□□□ 0.96
SNAPC2-201ENST00000221573 TUSC3Q13454 348 aa21.06■□□□□ 0.96
SNAPC2-201ENST00000221573 DCAF17Q5H9S7 520 aaPredicted RBP21.06■□□□□ 0.96
SNAPC2-201ENST00000221573 SPOUT1Q5T280 376 aaKnown RBP21.06■□□□□ 0.96
SNAPC2-201ENST00000221573 SPRED2Q7Z698 418 aa21.06■□□□□ 0.96
SNAPC2-201ENST00000221573 LUZP1Q86V48 1076 aa21.06■□□□□ 0.96
SNAPC2-201ENST00000221573 CREBRFQ8IUR6 639 aa21.06■□□□□ 0.96
SNAPC2-201ENST00000221573 COLGALT2Q8IYK4 626 aa21.06■□□□□ 0.96
SNAPC2-201ENST00000221573 ZNF516Q92618 1163 aa21.06■□□□□ 0.96
SNAPC2-201ENST00000221573 RABGGTAQ92696 567 aa21.06■□□□□ 0.96
SNAPC2-201ENST00000221573 FAM193BQ96PV7 902 aaPredicted RBP21.06■□□□□ 0.96
SNAPC2-201ENST00000221573 PAAF1Q9BRP4 392 aa21.06■□□□□ 0.96
SNAPC2-201ENST00000221573 HSD3B7Q9H2F3 369 aa21.06■□□□□ 0.96
SNAPC2-201ENST00000221573 INTS13Q9NVM9 706 aa21.06■□□□□ 0.96
SNAPC2-201ENST00000221573 LINC01553A4QN01 128 aa21.05■□□□□ 0.96
SNAPC2-201ENST00000221573 GNA14O95837 355 aa21.05■□□□□ 0.96
SNAPC2-201ENST00000221573 TMEM191BP0C7N4 346 aa21.05■□□□□ 0.96
SNAPC2-201ENST00000221573 CLDN10P78369 228 aa21.05■□□□□ 0.96
SNAPC2-201ENST00000221573 CDKAL1Q5VV42 579 aa21.05■□□□□ 0.96
SNAPC2-201ENST00000221573 TCERG1LQ5VWI1 586 aa21.05■□□□□ 0.96
SNAPC2-201ENST00000221573 NT5DC4Q86YG4 428 aa21.05■□□□□ 0.96
SNAPC2-201ENST00000221573 FAM200AQ8TCP9 573 aa21.05■□□□□ 0.96
SNAPC2-201ENST00000221573 TSPAN18Q96SJ8 248 aa21.05■□□□□ 0.96
SNAPC2-201ENST00000221573 NKX2-4Q9H2Z4 354 aa21.05■□□□□ 0.96
SNAPC2-201ENST00000221573 METTL14Q9HCE5 456 aaKnown RBP21.05■□□□□ 0.96
SNAPC2-201ENST00000221573 SLC38A7Q9NVC3 462 aa21.05■□□□□ 0.96
SNAPC2-201ENST00000221573 CAVIN2O95810 425 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms