RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 CCDC105Q8IYK2 499 aa17■□□□□ 0.31
SF3A2-201ENST00000221494 RUSC1Q9BVN2 902 aa17■□□□□ 0.31
SF3A2-201ENST00000221494 FOXP3Q9BZS1 431 aa17■□□□□ 0.31
SF3A2-201ENST00000221494 BHMT2Q9H2M3 363 aa17■□□□□ 0.31
SF3A2-201ENST00000221494 CDC42EP4Q9H3Q1 356 aaKnown RBP17■□□□□ 0.31
SF3A2-201ENST00000221494 PARVGQ9HBI0 331 aa17■□□□□ 0.31
SF3A2-201ENST00000221494 TMOD4Q9NZQ9 345 aa17■□□□□ 0.31
SF3A2-201ENST00000221494 UVRAGQ9P2Y5 699 aa17■□□□□ 0.31
SF3A2-201ENST00000221494 MYH11P35749 1972 aa17■□□□□ 0.31
SF3A2-201ENST00000221494 SMIM23A6NLE4 172 aa17■□□□□ 0.31
SF3A2-201ENST00000221494 SMNDC1O75940 238 aaKnown RBP eCLIP17■□□□□ 0.31
SF3A2-201ENST00000221494 NR1H3Q13133 447 aa17■□□□□ 0.31
SF3A2-201ENST00000221494 MTFR1Q15390 333 aa17■□□□□ 0.31
SF3A2-201ENST00000221494 NUGGCQ68CJ6 796 aa17■□□□□ 0.31
SF3A2-201ENST00000221494 CDCA2Q69YH5 1023 aaPredicted RBP17■□□□□ 0.31
SF3A2-201ENST00000221494 CCDC174Q6PII3 467 aa17■□□□□ 0.31
SF3A2-201ENST00000221494 AGGF1Q8N302 714 aaeCLIP17■□□□□ 0.31
SF3A2-201ENST00000221494 BBOF1Q8ND07 529 aa17■□□□□ 0.31
SF3A2-201ENST00000221494 GRK7Q8WTQ7 553 aa17■□□□□ 0.31
SF3A2-201ENST00000221494 ZNF570Q96NI8 536 aa17■□□□□ 0.31
SF3A2-201ENST00000221494 TMEM237Q96Q45 408 aa17■□□□□ 0.31
SF3A2-201ENST00000221494 UNC5CO95185 931 aa16.99■□□□□ 0.31
SF3A2-201ENST00000221494 TTC4O95801 387 aa16.99■□□□□ 0.31
SF3A2-201ENST00000221494 FTLP02792 175 aaPredicted RBP16.99■□□□□ 0.31
SF3A2-201ENST00000221494 KRT16P08779 473 aa16.99■□□□□ 0.31
SF3A2-201ENST00000221494 COMTP21964 271 aa16.99■□□□□ 0.31
SF3A2-201ENST00000221494 COPB2P35606 906 aa16.99■□□□□ 0.31
SF3A2-201ENST00000221494 SLC18A1P54219 525 aa16.99■□□□□ 0.31
SF3A2-201ENST00000221494 BFSP1Q12934 665 aa16.99■□□□□ 0.31
SF3A2-201ENST00000221494 ALCAMQ13740 583 aa16.99■□□□□ 0.31
SF3A2-201ENST00000221494 C11orf91Q3C1V1 193 aa16.99■□□□□ 0.31
SF3A2-201ENST00000221494 CCDC38Q502W7 563 aa16.99■□□□□ 0.31
SF3A2-201ENST00000221494 PRR16Q569H4 304 aa16.99■□□□□ 0.31
SF3A2-201ENST00000221494 C1orf186Q6ZWK4 172 aa16.99■□□□□ 0.31
SF3A2-201ENST00000221494 ADAT2Q7Z6V5 191 aaKnown RBP16.99■□□□□ 0.31
SF3A2-201ENST00000221494 LMO3Q8TAP4 145 aa16.99■□□□□ 0.31
SF3A2-201ENST00000221494 KRT35Q92764 455 aa16.99■□□□□ 0.31
SF3A2-201ENST00000221494 INPP5DQ92835 1189 aa16.99■□□□□ 0.31
SF3A2-201ENST00000221494 THOC1Q96FV9 657 aaKnown RBP16.99■□□□□ 0.31
SF3A2-201ENST00000221494 AGPAT3Q9NRZ7 376 aa16.99■□□□□ 0.31
SF3A2-201ENST00000221494 RSPH10B2B2RC85 870 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 FSCN2O14926 492 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 MAPK13O15264 365 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 RSPH10BP0C881 870 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 RWDD2BP57060 319 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 MCCD1P59942 119 aaPredicted RBP16.98■□□□□ 0.31
SF3A2-201ENST00000221494 PTK6Q13882 451 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 RGS9BPQ6ZS82 235 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 RNF217Q8TC41 542 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 SNF8Q96H20 258 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 C12orf42Q96LP6 360 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 EIF2AK1Q9BQI3 630 aaKnown RBP16.98■□□□□ 0.31
SF3A2-201ENST00000221494 CCDC113Q9H0I3 377 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 RPAP3Q9H6T3 665 aaPredicted RBP16.98■□□□□ 0.31
SF3A2-201ENST00000221494 UBN1Q9NPG3 1134 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 NKIRAS1Q9NYS0 192 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 TAS2R14Q9NYV8 317 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 DBR1Q9UK59 544 aaKnown RBP16.98■□□□□ 0.31
SF3A2-201ENST00000221494 L3MBTL1Q9Y468 752 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 AFG3L2Q9Y4W6 797 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 SNCAIPQ9Y6H5 919 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 IQCA1LA6NCM1 817 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 C19orf81C9J6K1 198 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 PIK3CDO00329 1044 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 MAGEB2O15479 319 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 DIAPH2O60879 1101 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 CYP1A2P05177 515 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 VGLL4Q14135 290 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 CBWD6Q4V339 395 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 CBWD3Q5JTY5 395 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 CBWD5Q5RIA9 395 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 CAPRIN2Q6IMN6 1127 aaKnown RBP16.98■□□□□ 0.31
SF3A2-201ENST00000221494 EP400NLQ6ZTU2 488 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 ZNF720Q7Z2F6 126 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 LDHDQ86WU2 507 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 C12orf56Q8IXR9 622 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 CCDC77Q9BR77 488 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 LRMDAQ9H2I8 198 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 ADAM22Q9P0K1 906 aa16.98■□□□□ 0.31
SF3A2-201ENST00000221494 MEIS1O00470 390 aa16.97■□□□□ 0.31
SF3A2-201ENST00000221494 SORBS3O60504 671 aa16.97■□□□□ 0.31
SF3A2-201ENST00000221494 CDH16O75309 829 aa16.97■□□□□ 0.31
SF3A2-201ENST00000221494 ABHD2P08910 425 aa16.97■□□□□ 0.31
SF3A2-201ENST00000221494 SLCO1A2P46721 670 aa16.97■□□□□ 0.31
SF3A2-201ENST00000221494 HMGCS2P54868 508 aa16.97■□□□□ 0.31
SF3A2-201ENST00000221494 PPARDQ03181 441 aa16.97■□□□□ 0.31
SF3A2-201ENST00000221494 STAT4Q14765 748 aa16.97■□□□□ 0.31
SF3A2-201ENST00000221494 MIS18BP1Q6P0N0 1132 aa16.97■□□□□ 0.31
SF3A2-201ENST00000221494 INTS8Q75QN2 995 aaKnown RBP16.97■□□□□ 0.31
SF3A2-201ENST00000221494 ZDHHC14Q8IZN3 488 aa16.97■□□□□ 0.31
SF3A2-201ENST00000221494 MYCT1Q8N699 235 aa16.97■□□□□ 0.31
SF3A2-201ENST00000221494 CDCA5Q96FF9 252 aa16.97■□□□□ 0.31
SF3A2-201ENST00000221494 SEPT11Q9NVA2 429 aaKnown RBP16.97■□□□□ 0.31
SF3A2-201ENST00000221494 GTF3C4Q9UKN8 822 aa16.97■□□□□ 0.31
SF3A2-201ENST00000221494 STARD13Q9Y3M8 1113 aa16.97■□□□□ 0.31
SF3A2-201ENST00000221494 FOXN3O00409 490 aaPredicted RBP16.97■□□□□ 0.31
SF3A2-201ENST00000221494 HNRNPCL1O60812 293 aaKnown RBP16.97■□□□□ 0.31
SF3A2-201ENST00000221494 ICAM1P05362 532 aa16.97■□□□□ 0.31
SF3A2-201ENST00000221494 MAPTP10636 758 aaKnown RBP16.97■□□□□ 0.31
SF3A2-201ENST00000221494 IBSPP21815 317 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms