RNA–Protein interactions for RNA: ENST00000220478.7

SCG3-201, Transcript of secretogranin III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG3, Length 3,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-201ENST00000220478 NT5C3AQ9H0P0 336 aa8.43□□□□□ -1.06
SCG3-201ENST00000220478 ENAMQ9NRM1 1142 aa8.43□□□□□ -1.06
SCG3-201ENST00000220478 PHTF1Q9UMS5 762 aa8.43□□□□□ -1.06
SCG3-201ENST00000220478 BZW2Q9Y6E2 419 aaKnown RBP8.43□□□□□ -1.06
SCG3-201ENST00000220478 SLC4A7Q9Y6M7 1214 aa8.43□□□□□ -1.06
SCG3-201ENST00000220478 POTEFA5A3E0 1075 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 H3BRB1 525 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 EDF1O60869 148 aaKnown RBP8.42□□□□□ -1.06
SCG3-201ENST00000220478 RNASEH1O60930 286 aaKnown RBP8.42□□□□□ -1.06
SCG3-201ENST00000220478 TDP2O95551 362 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 POTEIP0CG38 1075 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 POTEJP0CG39 1038 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 ANXA13P27216 316 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 PTPN4P29074 926 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 ATICP31939 592 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 CHRNA3P32297 505 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 TXKP42681 527 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 KCNJ1P48048 391 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 CACNB1Q02641 598 aaPredicted RBP8.42□□□□□ -1.06
SCG3-201ENST00000220478 ADCY1Q08828 1119 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 DNAJC3Q13217 504 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 ZNF449Q6P9G9 518 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 CCDC137Q6PK04 289 aaKnown RBP8.42□□□□□ -1.06
SCG3-201ENST00000220478 POTEEQ6S8J3 1075 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 C12orf50Q8NA57 414 aaPredicted RBP8.42□□□□□ -1.06
SCG3-201ENST00000220478 U2AF1L4Q8WU68 220 aaKnown RBP8.42□□□□□ -1.06
SCG3-201ENST00000220478 NLRP7Q8WX94 980 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 DTNBP1Q96EV8 351 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 SLC4A9Q96Q91 983 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 TUT1Q9H6E5 874 aaKnown RBP8.42□□□□□ -1.06
SCG3-201ENST00000220478 ASAP1Q9ULH1 1129 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 NAALADL1Q9UQQ1 740 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 ROBO1Q9Y6N7 1651 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 MAGEA13PA6NCF6 341 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 PDE8AO60658 829 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 ATP5HO75947 161 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 AKAP3O75969 853 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 TTLL1O95922 423 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 PYGMP11217 842 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 NAT2P11245 290 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 HADHBP55084 474 aaKnown RBP8.42□□□□□ -1.06
SCG3-201ENST00000220478 SESN3P58005 492 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 USP46P62068 366 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 VPS72Q15906 364 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 CCDC142Q17RM4 750 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 MUM1Q2TAK8 710 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 INO80DQ53TQ3 878 aaPredicted RBP8.42□□□□□ -1.06
SCG3-201ENST00000220478 GALNT17Q6IS24 598 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 TRMT10CQ7L0Y3 403 aaKnown RBP8.42□□□□□ -1.06
SCG3-201ENST00000220478 EPM2AIP1Q7L775 607 aaPredicted RBP8.42□□□□□ -1.06
SCG3-201ENST00000220478 HEATR3Q7Z4Q2 680 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 CLNKQ7Z7G1 428 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 NEK8Q86SG6 692 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 SHKBP1Q8TBC3 707 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 SLC35C1Q96A29 364 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 FRMD6Q96NE9 622 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 EVLQ9UI08 416 aaPredicted RBP8.42□□□□□ -1.06
SCG3-201ENST00000220478 SCOCQ9UIL1 159 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 SNED1Q8TER0 1413 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 EXOC3O60645 756 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 PSMG1O95456 288 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 TTC4O95801 387 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 UBTFL6P0CB48 400 aaPredicted RBP8.42□□□□□ -1.06
SCG3-201ENST00000220478 AMPD1P23109 780 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 COILP38432 576 aaPredicted RBP8.42□□□□□ -1.06
SCG3-201ENST00000220478 HYIQ5T013 277 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 RNF111Q6ZNA4 994 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 CYFIP1Q7L576 1253 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 MCF2L2Q86YR7 1114 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 PNMA1Q8ND90 353 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 FBXO22Q8NEZ5 403 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 LRRC8CQ8TDW0 803 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 SLCO2A1Q92959 643 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 SLC35B4Q969S0 331 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 GRAMD1AQ96CP6 724 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 LRRC37BQ96QE4 947 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 NAP1L3Q99457 506 aaPredicted RBP8.42□□□□□ -1.06
SCG3-201ENST00000220478 PITPNM3Q9BZ71 974 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 IKZF4Q9H2S9 585 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 CTTNBP2NLQ9P2B4 639 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 LRP2BPQ9P2M1 347 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 STX18Q9P2W9 335 aaKnown RBP8.42□□□□□ -1.06
SCG3-201ENST00000220478 ALG6Q9Y672 507 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 ROBO3Q96MS0 1386 aa8.42□□□□□ -1.06
SCG3-201ENST00000220478 ERVV-2B6SEH9 535 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 GSC2O15499 205 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 BUD23O43709 281 aaKnown RBP8.41□□□□□ -1.06
SCG3-201ENST00000220478 NAT1P18440 290 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 MARK3P27448 753 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 CASP4P49662 377 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 SLC34A1Q06495 639 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 FAM26FQ5R3K3 315 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 ZC3H18Q86VM9 953 aaKnown RBP8.41□□□□□ -1.06
SCG3-201ENST00000220478 KIAA1958Q8N8K9 716 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 FBXO27Q8NI29 283 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 DYDC1Q8WWB3 177 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 ASB16Q96NS5 453 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 POLR3CQ9BUI4 534 aaPredicted RBP8.41□□□□□ -1.06
SCG3-201ENST00000220478 KCNK13Q9HB14 408 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 TMEM165Q9HC07 324 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms