RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 THOC7Q6I9Y2 204 aaKnown RBP11.63□□□□□ -0.55
USP31-201ENST00000219689 DEPTORQ8TB45 409 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.63□□□□□ -0.557e-7■■■□□ 17.1
USP31-201ENST00000219689 HDHD2Q9H0R4 259 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 TSR3Q9UJK0 312 aaKnown RBP11.63□□□□□ -0.55
USP31-201ENST00000219689 PCDHA4Q9UN74 947 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 NUP205Q92621 2012 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 YY1P25490 414 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 KLK7P49862 253 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 ZCCHC7Q8N3Z6 543 aaKnown RBP11.63□□□□□ -0.55
USP31-201ENST00000219689 KLHL11Q9NVR0 708 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 ZSCAN32Q9NX65 697 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 MYO3BQ8WXR4 1341 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 CFBP00751 764 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 POTEIP0CG38 1075 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 MCL1Q07820 350 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 TRAF2Q12933 501 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 NR1I3Q14994 352 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 IFNEQ86WN2 208 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 PPP2R3CQ969Q6 453 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 CACNA2D2Q9NY47 1150 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 FTLP02792 175 aaPredicted RBP11.63□□□□□ -0.55
USP31-201ENST00000219689 IMPDH2P12268 514 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 RPS6KA3P51812 740 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 SWT1Q5T5J6 900 aaKnown RBP11.63□□□□□ -0.55
USP31-201ENST00000219689 TRAPPC11Q7Z392 1133 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 LRRC49Q8IUZ0 686 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 FAM162AQ96A26 154 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 QRICH2Q9H0J4 1663 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 ZNF638Q14966 1978 aaKnown RBP11.63□□□□□ -0.55
USP31-201ENST00000219689 SERPINB5P36952 375 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 PTPN12Q05209 780 aaKnown RBP11.63□□□□□ -0.55
USP31-201ENST00000219689 SLC34A1Q06495 639 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 PERM1Q5SV97 790 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 RAD9BQ6WBX8 426 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 FUKQ8N0W3 1084 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 EPAS1Q99814 870 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 ISCUQ9H1K1 167 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 EHD4Q9H223 541 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 ENTPD7Q9NQZ7 604 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 BSDC1Q9NW68 430 aaPredicted RBP11.63□□□□□ -0.55
USP31-201ENST00000219689 MBD2Q9UBB5 411 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 AFDNP55196 1824 aaKnown RBP11.63□□□□□ -0.55
USP31-201ENST00000219689 CCDC78A2IDD5 438 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 OPLAHO14841 1288 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 FOXN1O15353 648 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 POLGP54098 1239 aaPredicted RBP11.63□□□□□ -0.55
USP31-201ENST00000219689 AKAP4Q5JQC9 854 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 IFNL3Q8IZI9 196 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 DHX38Q92620 1227 aaKnown RBP11.63□□□□□ -0.55
USP31-201ENST00000219689 RERGLQ9H628 205 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 ARHGEF10LQ9HCE6 1279 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 RRN3Q9NYV6 651 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 ATP6V1HQ9UI12 483 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 HSMCR30P0CW71 290 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 ALOX15P16050 662 aaPredicted RBP11.63□□□□□ -0.55
USP31-201ENST00000219689 SOX5P35711 763 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 WASHC2DQ5SRD0 308 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 RTL3Q8N8U3 475 aaKnown RBP11.63□□□□□ -0.55
USP31-201ENST00000219689 RAD23AP54725 363 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 RALGDSQ12967 914 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 TGFBRAP1Q8WUH2 860 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 RNF25Q96BH1 459 aaPredicted RBP11.63□□□□□ -0.55
USP31-201ENST00000219689 TSPAN18Q96SJ8 248 aa11.63□□□□□ -0.55
USP31-201ENST00000219689 TRNAU1APQ9NX07 287 aaKnown RBP11.63□□□□□ -0.55
USP31-201ENST00000219689 MIF4GDA9UHW6 222 aaKnown RBP11.62□□□□□ -0.55
USP31-201ENST00000219689 ACCSLQ4AC99 568 aa11.62□□□□□ -0.55
USP31-201ENST00000219689 GALNT17Q6IS24 598 aa11.62□□□□□ -0.55
USP31-201ENST00000219689 PPP4R4Q6NUP7 873 aa11.62□□□□□ -0.55
USP31-201ENST00000219689 COL23A1Q86Y22 540 aaPredicted RBP11.62□□□□□ -0.55
USP31-201ENST00000219689 TNKSO95271 1327 aa11.62□□□□□ -0.55
USP31-201ENST00000219689 GHRP10912 638 aa11.62□□□□□ -0.55
USP31-201ENST00000219689 C12orf60Q5U649 245 aa11.62□□□□□ -0.55
USP31-201ENST00000219689 NLRP9Q7RTR0 991 aa11.62□□□□□ -0.55
USP31-201ENST00000219689 PSMD14O00487 310 aa11.62□□□□□ -0.55
USP31-201ENST00000219689 PSMA4P25789 261 aaKnown RBP11.62□□□□□ -0.55
USP31-201ENST00000219689 C1orf228Q6PIY5 440 aa11.62□□□□□ -0.55
USP31-201ENST00000219689 RBM44Q6ZP01 1051 aaKnown RBP11.62□□□□□ -0.55
USP31-201ENST00000219689 SEPT1Q8WYJ6 367 aa11.62□□□□□ -0.55
USP31-201ENST00000219689 ARHGEF38Q9NXL2 777 aa11.62□□□□□ -0.55
USP31-201ENST00000219689 DENND2AQ9ULE3 1009 aa11.62□□□□□ -0.55
USP31-201ENST00000219689 CALB2P22676 271 aa11.62□□□□□ -0.55
USP31-201ENST00000219689 FMR1Q06787 632 aaKnown RBP eCLIP11.62□□□□□ -0.552e-6■■■■□ 22.7
USP31-201ENST00000219689 RIBC1Q8N443 379 aaPredicted RBP11.62□□□□□ -0.55
USP31-201ENST00000219689 C1orf50Q9BV19 199 aa11.62□□□□□ -0.55
USP31-201ENST00000219689 CEP44Q9C0F1 390 aa11.62□□□□□ -0.55
USP31-201ENST00000219689 MRPL39Q9NYK5 338 aaKnown RBP11.62□□□□□ -0.55
USP31-201ENST00000219689 CNOT8Q9UFF9 292 aaKnown RBP11.62□□□□□ -0.55
USP31-201ENST00000219689 SUGT1Q9Y2Z0 365 aa11.62□□□□□ -0.55
USP31-201ENST00000219689 TEX14Q8IWB6 1497 aa11.62□□□□□ -0.55
USP31-201ENST00000219689 FAM25AB3EWG3 89 aa11.62□□□□□ -0.55
USP31-201ENST00000219689 FAM25CB3EWG5 89 aa11.62□□□□□ -0.55
USP31-201ENST00000219689 FAM25GB3EWG6 89 aa11.62□□□□□ -0.55
USP31-201ENST00000219689 ZYXQ15942 572 aaKnown RBP11.62□□□□□ -0.55
USP31-201ENST00000219689 EYA3Q99504 573 aa11.62□□□□□ -0.55
USP31-201ENST00000219689 PACSIN1Q9BY11 444 aa11.62□□□□□ -0.55
USP31-201ENST00000219689 NIP7Q9Y221 180 aaKnown RBP eCLIP11.62□□□□□ -0.55
USP31-201ENST00000219689 CDH16O75309 829 aa11.62□□□□□ -0.55
USP31-201ENST00000219689 DDAH1O94760 285 aa11.62□□□□□ -0.55
USP31-201ENST00000219689 PRLP01236 227 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms