RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 ERMNQ8TAM6 284 aa17.35■□□□□ 0.37
NME3-201ENST00000219302 MTF2Q9Y483 593 aaPredicted RBP17.35■□□□□ 0.37
NME3-201ENST00000219302 PRKCQQ04759 706 aa17.34■□□□□ 0.37
NME3-201ENST00000219302 ORC2Q13416 577 aaPredicted RBP17.34■□□□□ 0.37
NME3-201ENST00000219302 TRIP11Q15643 1979 aa17.34■□□□□ 0.37
NME3-201ENST00000219302 MLF2Q15773 248 aaPredicted RBP17.34■□□□□ 0.37
NME3-201ENST00000219302 GLRA4Q5JXX5 417 aa17.34■□□□□ 0.37
NME3-201ENST00000219302 ATF7IP2Q5U623 682 aa17.34■□□□□ 0.37
NME3-201ENST00000219302 C3orf58Q8NDZ4 430 aa17.34■□□□□ 0.37
NME3-201ENST00000219302 DDX27Q96GQ7 796 aaKnown RBP17.34■□□□□ 0.37
NME3-201ENST00000219302 OSBPL6Q9BZF3 934 aa17.34■□□□□ 0.37
NME3-201ENST00000219302 TNFSF13BQ9Y275 285 aa17.34■□□□□ 0.37
NME3-201ENST00000219302 MYH15Q9Y2K3 1946 aa17.34■□□□□ 0.37
NME3-201ENST00000219302 CDY1Q9Y6F8 540 aa17.34■□□□□ 0.37
NME3-201ENST00000219302 SMIM28A0A1B0GU29 152 aa17.33■□□□□ 0.36
NME3-201ENST00000219302 TKTP29401 623 aaKnown RBP17.33■□□□□ 0.36
NME3-201ENST00000219302 SOX4Q06945 474 aaPredicted RBP17.33■□□□□ 0.36
NME3-201ENST00000219302 SAFBQ15424 915 aaKnown RBP eCLIP17.33■□□□□ 0.36
NME3-201ENST00000219302 PABPC1LQ4VXU2 614 aaKnown RBP17.33■□□□□ 0.36
NME3-201ENST00000219302 ZC3H14Q6PJT7 736 aaKnown RBP17.33■□□□□ 0.36
NME3-201ENST00000219302 ANKS3Q6ZW76 656 aa17.33■□□□□ 0.36
NME3-201ENST00000219302 SUMF1Q8NBK3 374 aa17.33■□□□□ 0.36
NME3-201ENST00000219302 KIFAP3Q92845 792 aa17.33■□□□□ 0.36
NME3-201ENST00000219302 RMDN1Q96DB5 314 aa17.33■□□□□ 0.36
NME3-201ENST00000219302 IFT74Q96LB3 600 aa17.33■□□□□ 0.36
NME3-201ENST00000219302 UROC1Q96N76 676 aa17.33■□□□□ 0.36
NME3-201ENST00000219302 KXD1Q9BQD3 176 aa17.33■□□□□ 0.36
NME3-201ENST00000219302 BHMT2Q9H2M3 363 aa17.33■□□□□ 0.36
NME3-201ENST00000219302 FOXP1Q9H334 677 aaPredicted RBP17.33■□□□□ 0.36
NME3-201ENST00000219302 GOLGA2P5Q9HBQ8 144 aa17.33■□□□□ 0.36
NME3-201ENST00000219302 PTPRHQ9HD43 1115 aa17.33■□□□□ 0.36
NME3-201ENST00000219302 AVENQ9NQS1 362 aaPredicted RBP17.33■□□□□ 0.36
NME3-201ENST00000219302 COL4A3Q01955 1670 aa17.32■□□□□ 0.36
NME3-201ENST00000219302 ARHGEF37A1IGU5 675 aa17.32■□□□□ 0.36
NME3-201ENST00000219302 FAM170BA6NMN3 283 aa17.32■□□□□ 0.36
NME3-201ENST00000219302 I3L4J1 428 aa17.32■□□□□ 0.36
NME3-201ENST00000219302 K7ERI5 159 aa17.32■□□□□ 0.36
NME3-201ENST00000219302 TBC1D4O60343 1298 aa17.32■□□□□ 0.36
NME3-201ENST00000219302 BRCC3P46736 316 aa17.32■□□□□ 0.36
NME3-201ENST00000219302 FXR2P51116 673 aaKnown RBP eCLIP17.32■□□□□ 0.36
NME3-201ENST00000219302 PFKPQ01813 784 aa17.32■□□□□ 0.36
NME3-201ENST00000219302 ZNF528Q3MIS6 628 aa17.32■□□□□ 0.36
NME3-201ENST00000219302 SLC8B1Q6J4K2 584 aa17.32■□□□□ 0.36
NME3-201ENST00000219302 KIAA2013Q8IYS2 634 aa17.32■□□□□ 0.36
NME3-201ENST00000219302 CEP120Q8N960 986 aa17.32■□□□□ 0.36
NME3-201ENST00000219302 PLA2G2FQ9BZM2 168 aa17.32■□□□□ 0.36
NME3-201ENST00000219302 CEP250Q9BV73 2442 aa17.32■□□□□ 0.36
NME3-201ENST00000219302 SHISA7A6NL88 538 aa17.31■□□□□ 0.36
NME3-201ENST00000219302 TRAPPC3O43617 180 aa17.31■□□□□ 0.36
NME3-201ENST00000219302 ECI2O75521 394 aa17.31■□□□□ 0.36
NME3-201ENST00000219302 ABLIM3O94929 683 aa17.31■□□□□ 0.36
NME3-201ENST00000219302 RHOP08100 348 aa17.31■□□□□ 0.36
NME3-201ENST00000219302 CD72P21854 359 aa17.31■□□□□ 0.36
NME3-201ENST00000219302 CCT6AP40227 531 aaKnown RBP17.31■□□□□ 0.36
NME3-201ENST00000219302 GRM5P41594 1212 aa17.31■□□□□ 0.36
NME3-201ENST00000219302 MRPL58Q14197 206 aaKnown RBP17.31■□□□□ 0.36
NME3-201ENST00000219302 PDIA5Q14554 519 aa17.31■□□□□ 0.36
NME3-201ENST00000219302 SLC5A9Q2M3M2 681 aa17.31■□□□□ 0.36
NME3-201ENST00000219302 TTC38Q5R3I4 469 aa17.31■□□□□ 0.36
NME3-201ENST00000219302 HAUS3Q68CZ6 603 aa17.31■□□□□ 0.36
NME3-201ENST00000219302 DCLK2Q8N568 766 aa17.31■□□□□ 0.36
NME3-201ENST00000219302 FBXO18Q8NFZ0 1043 aa17.31■□□□□ 0.36
NME3-201ENST00000219302 ZNF461Q8TAF7 563 aa17.31■□□□□ 0.36
NME3-201ENST00000219302 ING5Q8WYH8 240 aa17.31■□□□□ 0.36
NME3-201ENST00000219302 RUBCNQ92622 972 aa17.31■□□□□ 0.36
NME3-201ENST00000219302 CLDN23Q96B33 292 aa17.31■□□□□ 0.36
NME3-201ENST00000219302 MCRS1Q96EZ8 462 aa17.31■□□□□ 0.36
NME3-201ENST00000219302 C8orf76Q96K31 380 aa17.31■□□□□ 0.36
NME3-201ENST00000219302 ZMAT2Q96NC0 199 aaKnown RBP17.31■□□□□ 0.36
NME3-201ENST00000219302 ACO2Q99798 780 aaKnown RBP17.31■□□□□ 0.36
NME3-201ENST00000219302 BCO2Q9BYV7 579 aa17.31■□□□□ 0.36
NME3-201ENST00000219302 CDT1Q9H211 546 aa17.31■□□□□ 0.36
NME3-201ENST00000219302 LTB4R2Q9NPC1 389 aa17.31■□□□□ 0.36
NME3-201ENST00000219302 GDE1Q9NZC3 331 aa17.31■□□□□ 0.36
NME3-201ENST00000219302 FBXO4Q9UKT5 387 aa17.31■□□□□ 0.36
NME3-201ENST00000219302 KIAA1024Q9UPX6 916 aa17.31■□□□□ 0.36
NME3-201ENST00000219302 MRPS23Q9Y3D9 190 aaKnown RBP17.31■□□□□ 0.36
NME3-201ENST00000219302 NPTX2P47972 431 aa17.3■□□□□ 0.36
NME3-201ENST00000219302 ROR1Q01973 937 aa17.3■□□□□ 0.36
NME3-201ENST00000219302 FZD5Q13467 585 aa17.3■□□□□ 0.36
NME3-201ENST00000219302 UBXN2BQ14CS0 331 aa17.3■□□□□ 0.36
NME3-201ENST00000219302 TAS1R3Q7RTX0 852 aa17.3■□□□□ 0.36
NME3-201ENST00000219302 DAW1Q8N136 415 aa17.3■□□□□ 0.36
NME3-201ENST00000219302 BORCS6Q96GS4 357 aa17.3■□□□□ 0.36
NME3-201ENST00000219302 TMEM134Q9H6X4 195 aa17.3■□□□□ 0.36
NME3-201ENST00000219302 SPATA6Q9NWH7 488 aaPredicted RBP17.3■□□□□ 0.36
NME3-201ENST00000219302 F5P12259 2224 aa17.3■□□□□ 0.36
NME3-201ENST00000219302 WDR27A2RRH5 827 aa17.29■□□□□ 0.36
NME3-201ENST00000219302 ABLIM1O14639 778 aa17.29■□□□□ 0.36
NME3-201ENST00000219302 MEFVO15553 781 aaPredicted RBP17.29■□□□□ 0.36
NME3-201ENST00000219302 ATF2P15336 505 aa17.29■□□□□ 0.36
NME3-201ENST00000219302 KCNE1P15382 129 aa17.29■□□□□ 0.36
NME3-201ENST00000219302 PTPN2P17706 415 aa17.29■□□□□ 0.36
NME3-201ENST00000219302 PROZP22891 400 aa17.29■□□□□ 0.36
NME3-201ENST00000219302 TRAPPC10P48553 1259 aa17.29■□□□□ 0.36
NME3-201ENST00000219302 PEX3P56589 373 aa17.29■□□□□ 0.36
NME3-201ENST00000219302 PRSS36Q5K4E3 855 aa17.29■□□□□ 0.36
NME3-201ENST00000219302 VARS2Q5ST30 1063 aaKnown RBP17.29■□□□□ 0.36
NME3-201ENST00000219302 TANGO2Q6ICL3 276 aa17.29■□□□□ 0.36
NME3-201ENST00000219302 APBB1IPQ7Z5R6 666 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms