RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 CYP1A2P05177 515 aa31.87■■■□□ 2.69
PABPN1-201ENST00000216727 MYBL2P10244 700 aa31.87■■■□□ 2.69
PABPN1-201ENST00000216727 TBXAS1P24557 533 aaPredicted RBP31.87■■■□□ 2.69
PABPN1-201ENST00000216727 POU5F1BQ06416 359 aa31.87■■■□□ 2.69
PABPN1-201ENST00000216727 SURF1Q15526 300 aa31.87■■■□□ 2.69
PABPN1-201ENST00000216727 SEZ6Q53EL9 994 aa31.87■■■□□ 2.69
PABPN1-201ENST00000216727 ACAD10Q6JQN1 1059 aa31.87■■■□□ 2.69
PABPN1-201ENST00000216727 ZBTB33Q86T24 672 aa31.87■■■□□ 2.69
PABPN1-201ENST00000216727 APOBEC3GQ9HC16 384 aaKnown RBP31.87■■■□□ 2.69
PABPN1-201ENST00000216727 CPSF3Q9UKF6 684 aaKnown RBP31.87■■■□□ 2.69
PABPN1-201ENST00000216727 ACO1P21399 889 aaKnown RBP31.86■■■□□ 2.69
PABPN1-201ENST00000216727 TNFSF9P41273 254 aa31.86■■■□□ 2.69
PABPN1-201ENST00000216727 RNASE9P60153 205 aaKnown RBP31.86■■■□□ 2.69
PABPN1-201ENST00000216727 GJC2Q5T442 439 aaPredicted RBP31.86■■■□□ 2.69
PABPN1-201ENST00000216727 MPZL3Q6UWV2 235 aa31.86■■■□□ 2.69
PABPN1-201ENST00000216727 NOC2LQ9Y3T9 749 aaKnown RBP31.86■■■□□ 2.69
PABPN1-201ENST00000216727 SNAI1O95863 264 aaPredicted RBP31.85■■■□□ 2.69
PABPN1-201ENST00000216727 INSRRP14616 1297 aa31.85■■■□□ 2.69
PABPN1-201ENST00000216727 CLCN3P51790 818 aa31.85■■■□□ 2.69
PABPN1-201ENST00000216727 SLC7A5Q01650 507 aa31.85■■■□□ 2.69
PABPN1-201ENST00000216727 FAM110CQ1W6H9 321 aa31.85■■■□□ 2.69
PABPN1-201ENST00000216727 CLEC16AQ2KHT3 1053 aa31.85■■■□□ 2.69
PABPN1-201ENST00000216727 SPOPLQ6IQ16 392 aa31.85■■■□□ 2.69
PABPN1-201ENST00000216727 AENQ8WTP8 325 aaKnown RBP31.85■■■□□ 2.69
PABPN1-201ENST00000216727 NLRP4Q96MN2 994 aa31.85■■■□□ 2.69
PABPN1-201ENST00000216727 CARD9Q9H257 536 aa31.85■■■□□ 2.69
PABPN1-201ENST00000216727 ALG6Q9Y672 507 aa31.85■■■□□ 2.69
PABPN1-201ENST00000216727 MAGEB2O15479 319 aa31.85■■■□□ 2.69
PABPN1-201ENST00000216727 CLTAP09496 248 aa31.85■■■□□ 2.69
PABPN1-201ENST00000216727 GABPB1Q06547 395 aaPredicted RBP31.85■■■□□ 2.69
PABPN1-201ENST00000216727 NCOA4Q13772 614 aa31.85■■■□□ 2.69
PABPN1-201ENST00000216727 KRT12Q99456 494 aa31.85■■■□□ 2.69
PABPN1-201ENST00000216727 UVRAGQ9P2Y5 699 aa31.85■■■□□ 2.69
PABPN1-201ENST00000216727 CNTN6Q9UQ52 1028 aa31.85■■■□□ 2.69
PABPN1-201ENST00000216727 NOP14P78316 857 aaKnown RBP31.84■■■□□ 2.69
PABPN1-201ENST00000216727 MBTD1Q05BQ5 628 aa31.84■■■□□ 2.69
PABPN1-201ENST00000216727 GPS2Q13227 327 aa31.84■■■□□ 2.69
PABPN1-201ENST00000216727 ATF7IP2Q5U623 682 aa31.84■■■□□ 2.69
PABPN1-201ENST00000216727 DPP9Q86TI2 863 aa31.84■■■□□ 2.69
PABPN1-201ENST00000216727 RPS6KC1Q96S38 1066 aa31.84■■■□□ 2.69
PABPN1-201ENST00000216727 COL1A2P08123 1366 aa31.84■■■□□ 2.69
PABPN1-201ENST00000216727 MIF4GDA9UHW6 222 aaKnown RBP31.83■■■□□ 2.69
PABPN1-201ENST00000216727 CCDC188H7C350 402 aa31.83■■■□□ 2.69
PABPN1-201ENST00000216727 PHACTR2O75167 634 aa31.83■■■□□ 2.69
PABPN1-201ENST00000216727 PPFIA4O75335 1185 aa31.83■■■□□ 2.69
PABPN1-201ENST00000216727 CELF2O95319 508 aaKnown RBP31.83■■■□□ 2.69
PABPN1-201ENST00000216727 ADCYAP1R1P41586 468 aa31.83■■■□□ 2.69
PABPN1-201ENST00000216727 LINC01465Q8N7H1 131 aa31.83■■■□□ 2.69
PABPN1-201ENST00000216727 AFG1LQ8WV93 481 aa31.83■■■□□ 2.69
PABPN1-201ENST00000216727 PTPN18Q99952 460 aa31.83■■■□□ 2.69
PABPN1-201ENST00000216727 INO80B-WBP1J3KQ70 363 aa31.83■■■□□ 2.69
PABPN1-201ENST00000216727 GJB1P08034 283 aa31.83■■■□□ 2.69
PABPN1-201ENST00000216727 UNGP13051 313 aaPredicted RBP31.83■■■□□ 2.69
PABPN1-201ENST00000216727 GLIPR1L2Q4G1C9 344 aa31.83■■■□□ 2.69
PABPN1-201ENST00000216727 MAML3Q96JK9 1138 aa31.83■■■□□ 2.69
PABPN1-201ENST00000216727 INO80BQ9C086 356 aaPredicted RBP31.83■■■□□ 2.69
PABPN1-201ENST00000216727 GDF3Q9NR23 364 aa31.83■■■□□ 2.69
PABPN1-201ENST00000216727 FAM170AA1A519 330 aa31.82■■■□□ 2.68
PABPN1-201ENST00000216727 MRPS25P82663 173 aaKnown RBP31.82■■■□□ 2.68
PABPN1-201ENST00000216727 IFT20Q8IY31 132 aa31.82■■■□□ 2.68
PABPN1-201ENST00000216727 ZNF653Q96CK0 615 aa31.82■■■□□ 2.68
PABPN1-201ENST00000216727 IMPG2Q9BZV3 1241 aa31.82■■■□□ 2.68
PABPN1-201ENST00000216727 ACBD3Q9H3P7 528 aa31.82■■■□□ 2.68
PABPN1-201ENST00000216727 ST7Q9NRC1 585 aa31.82■■■□□ 2.68
PABPN1-201ENST00000216727 TNFSF13BQ9Y275 285 aa31.82■■■□□ 2.68
PABPN1-201ENST00000216727 NUB1Q9Y5A7 615 aa31.82■■■□□ 2.68
PABPN1-201ENST00000216727 MAPK4P31152 587 aa31.82■■■□□ 2.68
PABPN1-201ENST00000216727 PLEKHH3Q7Z736 793 aa31.82■■■□□ 2.68
PABPN1-201ENST00000216727 IFNLR1Q8IU57 520 aaPredicted RBP31.82■■■□□ 2.68
PABPN1-201ENST00000216727 C16orf70Q9BSU1 422 aa31.82■■■□□ 2.68
PABPN1-201ENST00000216727 ASS1P00966 412 aaKnown RBP31.81■■■□□ 2.68
PABPN1-201ENST00000216727 GLI1P08151 1106 aa31.81■■■□□ 2.68
PABPN1-201ENST00000216727 FAM187BQ17R55 369 aa31.81■■■□□ 2.68
PABPN1-201ENST00000216727 DUOXA2Q1HG44 320 aa31.81■■■□□ 2.68
PABPN1-201ENST00000216727 SMYD5Q6GMV2 418 aa31.81■■■□□ 2.68
PABPN1-201ENST00000216727 ZBTB10Q96DT7 871 aa31.81■■■□□ 2.68
PABPN1-201ENST00000216727 NUP85Q9BW27 656 aa31.81■■■□□ 2.68
PABPN1-201ENST00000216727 PRMT7Q9NVM4 692 aaPredicted RBP31.81■■■□□ 2.68
PABPN1-201ENST00000216727 HEXIM1O94992 359 aaKnown RBP31.8■■■□□ 2.68
PABPN1-201ENST00000216727 PHKA2P46019 1235 aa31.8■■■□□ 2.68
PABPN1-201ENST00000216727 CLUL1Q15846 466 aa31.8■■■□□ 2.68
PABPN1-201ENST00000216727 ZNF568Q3ZCX4 644 aa31.8■■■□□ 2.68
PABPN1-201ENST00000216727 DCAF12L1Q5VU92 463 aa31.8■■■□□ 2.68
PABPN1-201ENST00000216727 GSPT2Q8IYD1 628 aaKnown RBP31.8■■■□□ 2.68
PABPN1-201ENST00000216727 ZNF564Q8TBZ8 553 aaPredicted RBP31.8■■■□□ 2.68
PABPN1-201ENST00000216727 IFT122Q9HBG6 1241 aa31.8■■■□□ 2.68
PABPN1-201ENST00000216727 EVPLQ92817 2033 aa31.8■■■□□ 2.68
PABPN1-201ENST00000216727 HOXD8P13378 290 aaPredicted RBP31.8■■■□□ 2.68
PABPN1-201ENST00000216727 IGBP1P78318 339 aa31.8■■■□□ 2.68
PABPN1-201ENST00000216727 DUSP28Q4G0W2 176 aa31.8■■■□□ 2.68
PABPN1-201ENST00000216727 ABHD16BQ9H3Z7 469 aa31.8■■■□□ 2.68
PABPN1-201ENST00000216727 MINDY3Q9H8M7 445 aa31.8■■■□□ 2.68
PABPN1-201ENST00000216727 KRIT1O00522 736 aa31.79■■■□□ 2.68
PABPN1-201ENST00000216727 ATMINO43313 823 aaPredicted RBP31.79■■■□□ 2.68
PABPN1-201ENST00000216727 CYP1A1P04798 512 aaPredicted RBP31.79■■■□□ 2.68
PABPN1-201ENST00000216727 OAS2P29728 719 aaKnown RBP31.79■■■□□ 2.68
PABPN1-201ENST00000216727 TNNT3P45378 269 aaPredicted RBP31.79■■■□□ 2.68
PABPN1-201ENST00000216727 EPHB4P54760 987 aa31.79■■■□□ 2.68
PABPN1-201ENST00000216727 EMBQ6PCB8 327 aa31.79■■■□□ 2.68
PABPN1-201ENST00000216727 HINFPQ9BQA5 517 aa31.79■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms