RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 NOP14P78316 857 aaKnown RBP16.8■□□□□ 0.28
LAPTM4A-201ENST00000175091 CDC42EP1Q00587 391 aa16.8■□□□□ 0.28
LAPTM4A-201ENST00000175091 POU5F1Q01860 360 aaKnown RBP16.8■□□□□ 0.28
LAPTM4A-201ENST00000175091 NCOA4Q13772 614 aa16.8■□□□□ 0.28
LAPTM4A-201ENST00000175091 KIZQ2M2Z5 673 aa16.8■□□□□ 0.28
LAPTM4A-201ENST00000175091 RUFY4Q6ZNE9 571 aa16.8■□□□□ 0.28
LAPTM4A-201ENST00000175091 EFCAB13Q8IY85 973 aa16.8■□□□□ 0.28
LAPTM4A-201ENST00000175091 PPP1R13LQ8WUF5 828 aa16.8■□□□□ 0.28
LAPTM4A-201ENST00000175091 DHX38Q92620 1227 aaKnown RBP16.8■□□□□ 0.28
LAPTM4A-201ENST00000175091 CPB2Q96IY4 423 aa16.8■□□□□ 0.28
LAPTM4A-201ENST00000175091 ARID3AQ99856 593 aa16.8■□□□□ 0.28
LAPTM4A-201ENST00000175091 CFHR5Q9BXR6 569 aa16.8■□□□□ 0.28
LAPTM4A-201ENST00000175091 FAM49AQ9H0Q0 323 aaPredicted RBP16.8■□□□□ 0.28
LAPTM4A-201ENST00000175091 UPF3AQ9H1J1 476 aaKnown RBP16.8■□□□□ 0.28
LAPTM4A-201ENST00000175091 APOBEC3GQ9HC16 384 aaKnown RBP16.8■□□□□ 0.28
LAPTM4A-201ENST00000175091 CREBZFQ9NS37 354 aa16.8■□□□□ 0.28
LAPTM4A-201ENST00000175091 JRKLQ9Y4A0 524 aa16.8■□□□□ 0.28
LAPTM4A-201ENST00000175091 CYP26A1O43174 497 aa16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 BUB1O43683 1085 aa16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 TADA3O75528 432 aa16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 IL18RAPO95256 599 aa16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 SGPL1O95470 568 aa16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 H2AFZP0C0S5 128 aa16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 CXCL8P10145 99 aa16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 USP8P40818 1118 aa16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 DEFB115Q30KQ5 88 aa16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 SPOPLQ6IQ16 392 aa16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 H2AFVQ71UI9 128 aa16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 NOP9Q86U38 636 aaKnown RBP16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 SLC47A2Q86VL8 602 aa16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 TMEM192Q8IY95 271 aa16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 MNS1Q8NEH6 495 aa16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 NCANO14594 1321 aa16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 A0A0A6YYK5 440 aaPredicted RBP16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 A0A1B0GUA9 196 aa16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 MEFVO15553 781 aaPredicted RBP16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 ASS1P00966 412 aaKnown RBP16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 CLTAP09496 248 aa16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 C6orf222P0C671 652 aaPredicted RBP16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 CYP11B1P15538 503 aa16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 TNFAIP3P21580 790 aa16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 PDE6CP51160 858 aa16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 OSTNP61366 133 aa16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 SP3Q02447 781 aa16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 CUL2Q13617 745 aa16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 WHAMMP3Q1A5X7 153 aa16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 DNAAF5Q86Y56 855 aa16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 RPF1Q9H9Y2 349 aaKnown RBP16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 HDAC6Q9UBN7 1215 aa16.79■□□□□ 0.28
LAPTM4A-201ENST00000175091 PDCD11Q14690 1871 aaKnown RBP16.78■□□□□ 0.28
LAPTM4A-201ENST00000175091 EFCAB8A8MWE9 144 aa16.78■□□□□ 0.28
LAPTM4A-201ENST00000175091 SEPT4O43236 478 aa16.78■□□□□ 0.28
LAPTM4A-201ENST00000175091 TREHO43280 583 aa16.78■□□□□ 0.28
LAPTM4A-201ENST00000175091 KPNA6O60684 536 aa16.78■□□□□ 0.28
LAPTM4A-201ENST00000175091 PHACTR2O75167 634 aa16.78■□□□□ 0.28
LAPTM4A-201ENST00000175091 STAG3L1P0CL83 205 aa16.78■□□□□ 0.28
LAPTM4A-201ENST00000175091 CHRNB2P17787 502 aa16.78■□□□□ 0.28
LAPTM4A-201ENST00000175091 ACO1P21399 889 aaKnown RBP16.78■□□□□ 0.28
LAPTM4A-201ENST00000175091 TBXAS1P24557 533 aaPredicted RBP16.78■□□□□ 0.28
LAPTM4A-201ENST00000175091 NKX3-2P78367 333 aa16.78■□□□□ 0.28
LAPTM4A-201ENST00000175091 TMEM62Q0P6H9 643 aa16.78■□□□□ 0.28
LAPTM4A-201ENST00000175091 NAA30Q147X3 362 aaPredicted RBP16.78■□□□□ 0.28
LAPTM4A-201ENST00000175091 PCBP1Q15365 356 aaKnown RBP eCLIP16.78■□□□□ 0.28
LAPTM4A-201ENST00000175091 KYAT1Q16773 422 aa16.78■□□□□ 0.28
LAPTM4A-201ENST00000175091 DUOXA2Q1HG44 320 aa16.78■□□□□ 0.28
LAPTM4A-201ENST00000175091 RPUSD2Q8IZ73 545 aaKnown RBP16.78■□□□□ 0.28
LAPTM4A-201ENST00000175091 FAM212AQ96EL1 285 aa16.78■□□□□ 0.28
LAPTM4A-201ENST00000175091 GCOM2Q9BZD3 368 aaPredicted RBP16.78■□□□□ 0.28
LAPTM4A-201ENST00000175091 IMPG2Q9BZV3 1241 aa16.78■□□□□ 0.28
LAPTM4A-201ENST00000175091 ACP6Q9NPH0 428 aa16.78■□□□□ 0.28
LAPTM4A-201ENST00000175091 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.78■□□□□ 0.281e-11■□□□□ 9.5
LAPTM4A-201ENST00000175091 NUB1Q9Y5A7 615 aa16.78■□□□□ 0.28
LAPTM4A-201ENST00000175091 SAR1BQ9Y6B6 198 aa16.78■□□□□ 0.28
LAPTM4A-201ENST00000175091 V9GYY5 206 aaPredicted RBP16.78■□□□□ 0.28
LAPTM4A-201ENST00000175091 UMODL1Q5DID0 1318 aa16.78■□□□□ 0.28
LAPTM4A-201ENST00000175091 C17orf102A2RUQ5 167 aa16.77■□□□□ 0.28
LAPTM4A-201ENST00000175091 TFRCP02786 760 aaKnown RBP16.77■□□□□ 0.28
LAPTM4A-201ENST00000175091 TMEM191BP0C7N4 346 aa16.77■□□□□ 0.28
LAPTM4A-201ENST00000175091 TMEM253P0C7T8 217 aa16.77■□□□□ 0.28
LAPTM4A-201ENST00000175091 GALCP54803 685 aa16.77■□□□□ 0.28
LAPTM4A-201ENST00000175091 FMO1Q01740 532 aa16.77■□□□□ 0.28
LAPTM4A-201ENST00000175091 TRIM32Q13049 653 aa16.77■□□□□ 0.28
LAPTM4A-201ENST00000175091 SCARA3Q6AZY7 606 aa16.77■□□□□ 0.28
LAPTM4A-201ENST00000175091 DDX1Q92499 740 aaKnown RBP16.77■□□□□ 0.28
LAPTM4A-201ENST00000175091 OSMRQ99650 979 aa16.77■□□□□ 0.28
LAPTM4A-201ENST00000175091 SEPT11Q9NVA2 429 aaKnown RBP16.77■□□□□ 0.28
LAPTM4A-201ENST00000175091 TAS2R14Q9NYV8 317 aa16.77■□□□□ 0.28
LAPTM4A-201ENST00000175091 GRID2IPA4D2P6 1211 aa16.77■□□□□ 0.27
LAPTM4A-201ENST00000175091 DARSP14868 501 aaKnown RBP16.77■□□□□ 0.27
LAPTM4A-201ENST00000175091 NAP1L1P55209 391 aaKnown RBP16.77■□□□□ 0.27
LAPTM4A-201ENST00000175091 TFAMQ00059 246 aaKnown RBP16.77■□□□□ 0.27
LAPTM4A-201ENST00000175091 CDR2Q01850 454 aa16.77■□□□□ 0.27
LAPTM4A-201ENST00000175091 CACNB2Q08289 660 aaPredicted RBP16.77■□□□□ 0.27
LAPTM4A-201ENST00000175091 CEP112Q8N8E3 955 aa16.77■□□□□ 0.27
LAPTM4A-201ENST00000175091 DNAJB3Q8WWF6 145 aa16.77■□□□□ 0.27
LAPTM4A-201ENST00000175091 ANKRD36BP1Q96IX9 119 aa16.77■□□□□ 0.27
LAPTM4A-201ENST00000175091 ADPGKQ9BRR6 497 aa16.77■□□□□ 0.27
LAPTM4A-201ENST00000175091 ISCUQ9H1K1 167 aa16.77■□□□□ 0.27
LAPTM4A-201ENST00000175091 SNX12Q9UMY4 172 aa16.77■□□□□ 0.27
LAPTM4A-201ENST00000175091 DNAH12Q6ZR08 3092 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms