RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 FAM187AA6NFU0 413 aa19.9■□□□□ 0.78
MBD3-201ENST00000156825 E5RI56 91 aa19.9■□□□□ 0.78
MBD3-201ENST00000156825 APOL1O14791 398 aa19.9■□□□□ 0.78
MBD3-201ENST00000156825 SULT1E1P49888 294 aa19.9■□□□□ 0.78
MBD3-201ENST00000156825 RBP5P82980 135 aa19.9■□□□□ 0.78
MBD3-201ENST00000156825 HIF1AQ16665 826 aa19.9■□□□□ 0.78
MBD3-201ENST00000156825 ANKRD20A4Q4UJ75 823 aa19.9■□□□□ 0.78
MBD3-201ENST00000156825 ANKRD20A8PQ5CZ79 823 aa19.9■□□□□ 0.78
MBD3-201ENST00000156825 ANKRD20A2Q5SQ80 823 aa19.9■□□□□ 0.78
MBD3-201ENST00000156825 ANKRD20A1Q5TYW2 823 aa19.9■□□□□ 0.78
MBD3-201ENST00000156825 TAS2R42Q7RTR8 314 aa19.9■□□□□ 0.78
MBD3-201ENST00000156825 SCG3Q8WXD2 468 aaKnown RBP19.9■□□□□ 0.78
MBD3-201ENST00000156825 RBM12Q9NTZ6 932 aaKnown RBP19.9■□□□□ 0.78
MBD3-201ENST00000156825 ZFP69BQ9UJL9 534 aa19.9■□□□□ 0.78
MBD3-201ENST00000156825 CDK17Q00537 523 aa19.9■□□□□ 0.78
MBD3-201ENST00000156825 SNAPC2Q13487 334 aa19.9■□□□□ 0.78
MBD3-201ENST00000156825 RASSF3Q86WH2 238 aa19.9■□□□□ 0.78
MBD3-201ENST00000156825 APPL2Q8NEU8 664 aa19.9■□□□□ 0.78
MBD3-201ENST00000156825 NCLNQ969V3 563 aa19.9■□□□□ 0.78
MBD3-201ENST00000156825 ADAMTS13Q76LX8 1427 aa19.9■□□□□ 0.78
MBD3-201ENST00000156825 CCL15-CCL14A0A0B4J2E2 113 aa19.89■□□□□ 0.78
MBD3-201ENST00000156825 E2F8A0AVK6 867 aa19.89■□□□□ 0.78
MBD3-201ENST00000156825 CCL15Q16663 113 aa19.89■□□□□ 0.78
MBD3-201ENST00000156825 KCNV1Q6PIU1 500 aa19.89■□□□□ 0.77
MBD3-201ENST00000156825 RASGRP2Q7LDG7 609 aa19.89■□□□□ 0.77
MBD3-201ENST00000156825 NDUFAF2Q8N183 169 aa19.89■□□□□ 0.77
MBD3-201ENST00000156825 ULK4Q96C45 1275 aa19.89■□□□□ 0.77
MBD3-201ENST00000156825 ATP6V1G3Q96LB4 118 aa19.89■□□□□ 0.77
MBD3-201ENST00000156825 RUSC1Q9BVN2 902 aa19.89■□□□□ 0.77
MBD3-201ENST00000156825 EHD2Q9NZN4 543 aa19.89■□□□□ 0.77
MBD3-201ENST00000156825 PPP1R3GB7ZBB8 358 aa19.89■□□□□ 0.77
MBD3-201ENST00000156825 GYS1P13807 737 aa19.89■□□□□ 0.77
MBD3-201ENST00000156825 KLRC1P26715 233 aa19.89■□□□□ 0.77
MBD3-201ENST00000156825 CASP4P49662 377 aa19.89■□□□□ 0.77
MBD3-201ENST00000156825 P3H1Q32P28 736 aa19.89■□□□□ 0.77
MBD3-201ENST00000156825 COBLL1Q53SF7 1204 aa19.89■□□□□ 0.77
MBD3-201ENST00000156825 BARGINQ6ZT62 677 aa19.89■□□□□ 0.77
MBD3-201ENST00000156825 CDKL3Q8IVW4 592 aaPredicted RBP19.89■□□□□ 0.77
MBD3-201ENST00000156825 TTC8Q8TAM2 541 aa19.89■□□□□ 0.77
MBD3-201ENST00000156825 EGFL8Q99944 293 aa19.89■□□□□ 0.77
MBD3-201ENST00000156825 ACTR5Q9H9F9 607 aaPredicted RBP19.89■□□□□ 0.77
MBD3-201ENST00000156825 RAB6BQ9NRW1 208 aa19.89■□□□□ 0.77
MBD3-201ENST00000156825 DCTN3O75935 186 aa19.89■□□□□ 0.77
MBD3-201ENST00000156825 NUMBP49757 651 aa19.89■□□□□ 0.77
MBD3-201ENST00000156825 TPI1P60174 286 aa19.89■□□□□ 0.77
MBD3-201ENST00000156825 ORC1Q13415 861 aa19.89■□□□□ 0.77
MBD3-201ENST00000156825 CELF4Q9BZC1 486 aaKnown RBP19.89■□□□□ 0.77
MBD3-201ENST00000156825 SETBP1Q9Y6X0 1596 aa19.89■□□□□ 0.77
MBD3-201ENST00000156825 SYNDIG1LA6NDD5 238 aa19.89■□□□□ 0.77
MBD3-201ENST00000156825 AP3M2P53677 418 aa19.89■□□□□ 0.77
MBD3-201ENST00000156825 ATF7IP2Q5U623 682 aa19.89■□□□□ 0.77
MBD3-201ENST00000156825 ATL2Q8NHH9 583 aa19.89■□□□□ 0.77
MBD3-201ENST00000156825 CNTNAP4Q9C0A0 1308 aa19.88■□□□□ 0.77
MBD3-201ENST00000156825 MGEA5O60502 916 aa19.88■□□□□ 0.77
MBD3-201ENST00000156825 GH1P01241 217 aa19.88■□□□□ 0.77
MBD3-201ENST00000156825 HOXD10P28358 340 aa19.88■□□□□ 0.77
MBD3-201ENST00000156825 ELMOD1Q8N336 334 aa19.88■□□□□ 0.77
MBD3-201ENST00000156825 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.88■□□□□ 0.77
MBD3-201ENST00000156825 MAP3K7O43318 606 aa19.88■□□□□ 0.77
MBD3-201ENST00000156825 HUNKP57058 714 aa19.88■□□□□ 0.77
MBD3-201ENST00000156825 ZNF235Q14590 738 aa19.88■□□□□ 0.77
MBD3-201ENST00000156825 GLRA4Q5JXX5 417 aa19.88■□□□□ 0.77
MBD3-201ENST00000156825 COL23A1Q86Y22 540 aaPredicted RBP19.88■□□□□ 0.77
MBD3-201ENST00000156825 ENGASEQ8NFI3 743 aa19.88■□□□□ 0.77
MBD3-201ENST00000156825 KCNV2Q8TDN2 545 aa19.88■□□□□ 0.77
MBD3-201ENST00000156825 NDFIP2Q9NV92 336 aa19.88■□□□□ 0.77
MBD3-201ENST00000156825 FAF1Q9UNN5 650 aaPredicted RBP19.88■□□□□ 0.77
MBD3-201ENST00000156825 ORC6Q9Y5N6 252 aa19.88■□□□□ 0.77
MBD3-201ENST00000156825 KDM6AO15550 1401 aaPredicted RBP19.88■□□□□ 0.77
MBD3-201ENST00000156825 AMHR2Q16671 573 aa19.88■□□□□ 0.77
MBD3-201ENST00000156825 SPATA2LQ8IUW3 424 aaPredicted RBP19.88■□□□□ 0.77
MBD3-201ENST00000156825 MMTAG2Q9BU76 263 aaKnown RBP19.88■□□□□ 0.77
MBD3-201ENST00000156825 UNC45AQ9H3U1 944 aa19.88■□□□□ 0.77
MBD3-201ENST00000156825 PLEKHA5Q9HAU0 1116 aa19.88■□□□□ 0.77
MBD3-201ENST00000156825 ZFATQ9P243 1243 aa19.88■□□□□ 0.77
MBD3-201ENST00000156825 IQSEC2Q5JU85 1478 aa19.88■□□□□ 0.77
MBD3-201ENST00000156825 CFAP69A5D8W1 941 aa19.88■□□□□ 0.77
MBD3-201ENST00000156825 CYP2C9P11712 490 aa19.88■□□□□ 0.77
MBD3-201ENST00000156825 COMTP21964 271 aa19.88■□□□□ 0.77
MBD3-201ENST00000156825 LONRF1Q17RB8 773 aa19.88■□□□□ 0.77
MBD3-201ENST00000156825 LRRC37BQ96QE4 947 aa19.88■□□□□ 0.77
MBD3-201ENST00000156825 TRPC7Q9HCX4 862 aa19.88■□□□□ 0.77
MBD3-201ENST00000156825 CLTCQ00610 1675 aaKnown RBP19.88■□□□□ 0.77
MBD3-201ENST00000156825 KPNA7A9QM74 516 aa19.87■□□□□ 0.77
MBD3-201ENST00000156825 LUC7L3O95232 432 aaKnown RBP19.87■□□□□ 0.77
MBD3-201ENST00000156825 KCNA1Q09470 495 aa19.87■□□□□ 0.77
MBD3-201ENST00000156825 SERPINI1Q99574 410 aa19.87■□□□□ 0.77
MBD3-201ENST00000156825 SSU72P8A0A1W2PR75 194 aa19.87■□□□□ 0.77
MBD3-201ENST00000156825 SGSM1Q2NKQ1 1148 aa19.87■□□□□ 0.77
MBD3-201ENST00000156825 EDRF1Q3B7T1 1238 aa19.87■□□□□ 0.77
MBD3-201ENST00000156825 UPF3AQ9H1J1 476 aaKnown RBP19.87■□□□□ 0.77
MBD3-201ENST00000156825 TJP2Q9UDY2 1190 aa19.87■□□□□ 0.77
MBD3-201ENST00000156825 DBR1Q9UK59 544 aaKnown RBP19.87■□□□□ 0.77
MBD3-201ENST00000156825 MED24O75448 989 aa19.87■□□□□ 0.77
MBD3-201ENST00000156825 CD44P16070 742 aaKnown RBP19.87■□□□□ 0.77
MBD3-201ENST00000156825 GNASQ5JWF2 1037 aa19.87■□□□□ 0.77
MBD3-201ENST00000156825 CYP4A22Q5TCH4 519 aa19.87■□□□□ 0.77
MBD3-201ENST00000156825 KLK14Q9P0G3 267 aa19.87■□□□□ 0.77
MBD3-201ENST00000156825 PPRC1Q5VV67 1664 aaKnown RBP19.87■□□□□ 0.77
MBD3-201ENST00000156825 MDM2Q00987 491 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms