RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 AGPAT1Q99943 283 aa12.86□□□□□ -0.35
CHPF2-201ENST00000035307 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.86□□□□□ -0.35
CHPF2-201ENST00000035307 HES2Q9Y543 173 aa12.86□□□□□ -0.35
CHPF2-201ENST00000035307 COMMD10Q9Y6G5 202 aa12.86□□□□□ -0.35
CHPF2-201ENST00000035307 FAM237AA0A1B0GTK4 181 aa12.86□□□□□ -0.35
CHPF2-201ENST00000035307 SSU72P8A0A1W2PR75 194 aa12.86□□□□□ -0.35
CHPF2-201ENST00000035307 ZNF862O60290 1169 aa12.86□□□□□ -0.35
CHPF2-201ENST00000035307 GLI1P08151 1106 aa12.86□□□□□ -0.35
CHPF2-201ENST00000035307 MAN1A1P33908 653 aa12.86□□□□□ -0.35
CHPF2-201ENST00000035307 ATN1P54259 1190 aaPredicted RBP12.86□□□□□ -0.35
CHPF2-201ENST00000035307 PPP6R3Q5H9R7 873 aaPredicted RBP12.86□□□□□ -0.35
CHPF2-201ENST00000035307 CCDC137Q6PK04 289 aaKnown RBP12.86□□□□□ -0.35
CHPF2-201ENST00000035307 SRRM1Q8IYB3 904 aaKnown RBP12.86□□□□□ -0.35
CHPF2-201ENST00000035307 CEP120Q8N960 986 aa12.86□□□□□ -0.35
CHPF2-201ENST00000035307 WHAMMQ8TF30 809 aa12.86□□□□□ -0.35
CHPF2-201ENST00000035307 ARHGEF2Q92974 986 aaKnown RBP12.86□□□□□ -0.35
CHPF2-201ENST00000035307 RNF14Q9UBS8 474 aa12.86□□□□□ -0.35
CHPF2-201ENST00000035307 NHSQ6T4R5 1651 aa12.85□□□□□ -0.35
CHPF2-201ENST00000035307 ANKRD36CQ5JPF3 1778 aa12.85□□□□□ -0.35
CHPF2-201ENST00000035307 PPFIA4O75335 1185 aa12.85□□□□□ -0.35
CHPF2-201ENST00000035307 GH1P01241 217 aa12.85□□□□□ -0.35
CHPF2-201ENST00000035307 NAA25Q14CX7 972 aa12.85□□□□□ -0.35
CHPF2-201ENST00000035307 SPOUT1Q5T280 376 aaKnown RBP12.85□□□□□ -0.35
CHPF2-201ENST00000035307 KRT39Q6A163 491 aa12.85□□□□□ -0.35
CHPF2-201ENST00000035307 C1orf186Q6ZWK4 172 aa12.85□□□□□ -0.35
CHPF2-201ENST00000035307 RSRC2Q7L4I2 434 aaKnown RBP12.85□□□□□ -0.35
CHPF2-201ENST00000035307 HOMER3Q9NSC5 361 aa12.85□□□□□ -0.35
CHPF2-201ENST00000035307 RBPJLQ9UBG7 517 aa12.85□□□□□ -0.35
CHPF2-201ENST00000035307 DDX60Q8IY21 1712 aaKnown RBP12.85□□□□□ -0.35
CHPF2-201ENST00000035307 H3BRB1 525 aa12.85□□□□□ -0.35
CHPF2-201ENST00000035307 CYP2C9P11712 490 aa12.85□□□□□ -0.35
CHPF2-201ENST00000035307 ATP2A2P16615 1042 aaKnown RBP12.85□□□□□ -0.35
CHPF2-201ENST00000035307 SP2Q02086 613 aa12.85□□□□□ -0.35
CHPF2-201ENST00000035307 OR6B2Q6IFH4 312 aa12.85□□□□□ -0.35
CHPF2-201ENST00000035307 ELOA2Q8IYF1 753 aaPredicted RBP12.85□□□□□ -0.35
CHPF2-201ENST00000035307 TAS1R2Q8TE23 839 aa12.85□□□□□ -0.35
CHPF2-201ENST00000035307 TUT1Q9H6E5 874 aaKnown RBP12.85□□□□□ -0.35
CHPF2-201ENST00000035307 PPP2R3BQ9Y5P8 575 aa12.85□□□□□ -0.35
CHPF2-201ENST00000035307 MYH1P12882 1939 aa12.85□□□□□ -0.35
CHPF2-201ENST00000035307 MYH7P12883 1935 aa12.85□□□□□ -0.35
CHPF2-201ENST00000035307 SPDYE5A6NIY4 337 aa12.85□□□□□ -0.35
CHPF2-201ENST00000035307 MYBL2P10244 700 aa12.85□□□□□ -0.35
CHPF2-201ENST00000035307 PSMC4P43686 418 aa12.85□□□□□ -0.35
CHPF2-201ENST00000035307 SESN3P58005 492 aa12.85□□□□□ -0.35
CHPF2-201ENST00000035307 TRIM59Q8IWR1 403 aa12.85□□□□□ -0.35
CHPF2-201ENST00000035307 SMARCAD1Q9H4L7 1026 aa12.85□□□□□ -0.35
CHPF2-201ENST00000035307 REXO2Q9Y3B8 237 aaKnown RBP12.85□□□□□ -0.35
CHPF2-201ENST00000035307 UBIAD1Q9Y5Z9 338 aa12.85□□□□□ -0.35
CHPF2-201ENST00000035307 SOWAHBA6NEL2 793 aa12.84□□□□□ -0.35
CHPF2-201ENST00000035307 NUGGCQ68CJ6 796 aa12.84□□□□□ -0.35
CHPF2-201ENST00000035307 FOXR1Q6PIV2 292 aa12.84□□□□□ -0.35
CHPF2-201ENST00000035307 FBXL13Q8NEE6 735 aa12.84□□□□□ -0.35
CHPF2-201ENST00000035307 C9orf72Q96LT7 481 aa12.84□□□□□ -0.35
CHPF2-201ENST00000035307 ZFYVE28Q9HCC9 887 aa12.84□□□□□ -0.35
CHPF2-201ENST00000035307 FEZ2Q9UHY8 353 aaPredicted RBP12.84□□□□□ -0.35
CHPF2-201ENST00000035307 ALG6Q9Y672 507 aa12.84□□□□□ -0.35
CHPF2-201ENST00000035307 SDK1Q7Z5N4 2213 aa12.84□□□□□ -0.35
CHPF2-201ENST00000035307 EIF4E1BA6NMX2 242 aaKnown RBP12.84□□□□□ -0.35
CHPF2-201ENST00000035307 ZRANB2O95218 330 aaKnown RBP eCLIP12.84□□□□□ -0.35
CHPF2-201ENST00000035307 MAP3K6O95382 1288 aa12.84□□□□□ -0.35
CHPF2-201ENST00000035307 RPSAP08865 295 aaKnown RBP12.84□□□□□ -0.35
CHPF2-201ENST00000035307 ELNP15502 786 aa12.84□□□□□ -0.35
CHPF2-201ENST00000035307 ALS2CLQ60I27 953 aa12.84□□□□□ -0.35
CHPF2-201ENST00000035307 MOXD1Q6UVY6 613 aa12.84□□□□□ -0.35
CHPF2-201ENST00000035307 RHOT2Q8IXI1 618 aa12.84□□□□□ -0.35
CHPF2-201ENST00000035307 GPD1LQ8N335 351 aa12.84□□□□□ -0.35
CHPF2-201ENST00000035307 OR6B3Q8NGW1 331 aa12.84□□□□□ -0.35
CHPF2-201ENST00000035307 MDM1Q8TC05 714 aa12.84□□□□□ -0.35
CHPF2-201ENST00000035307 ATG4AQ8WYN0 398 aa12.84□□□□□ -0.35
CHPF2-201ENST00000035307 HEXIM2Q96MH2 286 aaKnown RBP12.84□□□□□ -0.35
CHPF2-201ENST00000035307 ODF2LQ9ULJ1 636 aa12.84□□□□□ -0.35
CHPF2-201ENST00000035307 MRPL42Q9Y6G3 142 aaKnown RBP12.84□□□□□ -0.35
CHPF2-201ENST00000035307 PDGFRBP09619 1106 aa12.84□□□□□ -0.35
CHPF2-201ENST00000035307 COMTP21964 271 aa12.84□□□□□ -0.35
CHPF2-201ENST00000035307 PPIL2Q13356 520 aa12.84□□□□□ -0.35
CHPF2-201ENST00000035307 NAB2Q15742 525 aa12.84□□□□□ -0.35
CHPF2-201ENST00000035307 EDRF1Q3B7T1 1238 aa12.84□□□□□ -0.35
CHPF2-201ENST00000035307 CBWD6Q4V339 395 aa12.84□□□□□ -0.35
CHPF2-201ENST00000035307 CBWD3Q5JTY5 395 aa12.84□□□□□ -0.35
CHPF2-201ENST00000035307 CBWD5Q5RIA9 395 aa12.84□□□□□ -0.35
CHPF2-201ENST00000035307 CXCL17Q6UXB2 119 aa12.84□□□□□ -0.35
CHPF2-201ENST00000035307 APBB1IPQ7Z5R6 666 aaPredicted RBP12.84□□□□□ -0.35
CHPF2-201ENST00000035307 ANKRD36BP1Q96IX9 119 aa12.84□□□□□ -0.35
CHPF2-201ENST00000035307 MED10Q9BTT4 135 aa12.84□□□□□ -0.35
CHPF2-201ENST00000035307 ERAP1Q9NZ08 941 aa12.84□□□□□ -0.35
CHPF2-201ENST00000035307 SEL1LQ9UBV2 794 aa12.84□□□□□ -0.35
CHPF2-201ENST00000035307 PIK3CDO00329 1044 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 FAM153BP0C7A2 387 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 FAM153CQ494X1 144 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 ASAP3Q8TDY4 903 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 BRI3BPQ8WY22 251 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 KIF12Q96FN5 646 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 RPS6KC1Q96S38 1066 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 TRIM7Q9C029 511 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 FAM153AQ9UHL3 310 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 DBR1Q9UK59 544 aaKnown RBP12.83□□□□□ -0.36
CHPF2-201ENST00000035307 CCDC88AQ3V6T2 1871 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 TLR3O15455 904 aaKnown RBP12.83□□□□□ -0.36
CHPF2-201ENST00000035307 SGPL1O95470 568 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 SCP2P22307 547 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms