RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 ATP2C1P98194 919 aaPredicted RBP17.43■□□□□ 0.38
ERCC1-201ENST00000013807 DMP1Q13316 513 aaPredicted RBP17.43■□□□□ 0.38
ERCC1-201ENST00000013807 HTR4Q13639 388 aa17.43■□□□□ 0.38
ERCC1-201ENST00000013807 KCNK18Q7Z418 384 aa17.43■□□□□ 0.38
ERCC1-201ENST00000013807 CEP57Q86XR8 500 aa17.43■□□□□ 0.38
ERCC1-201ENST00000013807 GLYCTKQ8IVS8 523 aa17.43■□□□□ 0.38
ERCC1-201ENST00000013807 HASPINQ8TF76 798 aa17.43■□□□□ 0.38
ERCC1-201ENST00000013807 SPIRE2Q8WWL2 714 aa17.43■□□□□ 0.38
ERCC1-201ENST00000013807 DDX27Q96GQ7 796 aaKnown RBP17.43■□□□□ 0.38
ERCC1-201ENST00000013807 CDT1Q9H211 546 aa17.43■□□□□ 0.38
ERCC1-201ENST00000013807 SLC2A4RGQ9NR83 387 aa17.43■□□□□ 0.38
ERCC1-201ENST00000013807 KCND2Q9NZV8 630 aa17.43■□□□□ 0.38
ERCC1-201ENST00000013807 ZNF292O60281 2723 aa17.42■□□□□ 0.38
ERCC1-201ENST00000013807 CCDC169A6NNP5 214 aa17.42■□□□□ 0.38
ERCC1-201ENST00000013807 PP2D1A8MPX8 630 aa17.42■□□□□ 0.38
ERCC1-201ENST00000013807 PI15O43692 258 aa17.42■□□□□ 0.38
ERCC1-201ENST00000013807 NARSO43776 548 aaKnown RBP17.42■□□□□ 0.38
ERCC1-201ENST00000013807 C8AP07357 584 aa17.42■□□□□ 0.38
ERCC1-201ENST00000013807 MYBP10242 640 aa17.42■□□□□ 0.38
ERCC1-201ENST00000013807 MCF2P10911 925 aa17.42■□□□□ 0.38
ERCC1-201ENST00000013807 LIG1P18858 919 aa17.42■□□□□ 0.38
ERCC1-201ENST00000013807 IGFBP6P24592 240 aaPredicted RBP17.42■□□□□ 0.38
ERCC1-201ENST00000013807 CDC25AP30304 524 aa17.42■□□□□ 0.38
ERCC1-201ENST00000013807 ARL6IP4Q66PJ3 421 aaKnown RBP17.42■□□□□ 0.38
ERCC1-201ENST00000013807 CEP120Q8N960 986 aa17.42■□□□□ 0.38
ERCC1-201ENST00000013807 SYT2Q8N9I0 419 aaPredicted RBP17.42■□□□□ 0.38
ERCC1-201ENST00000013807 RSAD2Q8WXG1 361 aa17.42■□□□□ 0.38
ERCC1-201ENST00000013807 RUSC1Q9BVN2 902 aa17.42■□□□□ 0.38
ERCC1-201ENST00000013807 CCDC94Q9BW85 323 aaPredicted RBP17.42■□□□□ 0.38
ERCC1-201ENST00000013807 SLC38A7Q9NVC3 462 aa17.42■□□□□ 0.38
ERCC1-201ENST00000013807 GVINP1Q7Z2Y8 2422 aa17.41■□□□□ 0.38
ERCC1-201ENST00000013807 MIA3Q5JRA6 1907 aa17.41■□□□□ 0.38
ERCC1-201ENST00000013807 KRBA1A5PL33 1030 aa17.41■□□□□ 0.38
ERCC1-201ENST00000013807 SLC26A4O43511 780 aa17.41■□□□□ 0.38
ERCC1-201ENST00000013807 FSHRP23945 695 aa17.41■□□□□ 0.38
ERCC1-201ENST00000013807 OR1D2P34982 312 aa17.41■□□□□ 0.38
ERCC1-201ENST00000013807 SOX4Q06945 474 aaPredicted RBP17.41■□□□□ 0.38
ERCC1-201ENST00000013807 PPM1LQ5SGD2 360 aa17.41■□□□□ 0.38
ERCC1-201ENST00000013807 AXDND1Q5T1B0 1012 aaPredicted RBP17.41■□□□□ 0.38
ERCC1-201ENST00000013807 LIN9Q5TKA1 542 aa17.41■□□□□ 0.38
ERCC1-201ENST00000013807 SLC8B1Q6J4K2 584 aa17.41■□□□□ 0.38
ERCC1-201ENST00000013807 PHLDB3Q6NSJ2 640 aa17.41■□□□□ 0.38
ERCC1-201ENST00000013807 RSPO2Q6UXX9 243 aaPredicted RBP17.41■□□□□ 0.38
ERCC1-201ENST00000013807 ANKS3Q6ZW76 656 aa17.41■□□□□ 0.38
ERCC1-201ENST00000013807 CCDC105Q8IYK2 499 aa17.41■□□□□ 0.38
ERCC1-201ENST00000013807 SIX5Q8N196 739 aa17.41■□□□□ 0.38
ERCC1-201ENST00000013807 C3orf58Q8NDZ4 430 aa17.41■□□□□ 0.38
ERCC1-201ENST00000013807 ZMAT2Q96NC0 199 aaKnown RBP17.41■□□□□ 0.38
ERCC1-201ENST00000013807 TARS2Q9BW92 718 aaKnown RBP17.41■□□□□ 0.38
ERCC1-201ENST00000013807 KMT5AQ9NQR1 393 aa17.41■□□□□ 0.38
ERCC1-201ENST00000013807 FAM86C1Q9NVL1 165 aa17.41■□□□□ 0.38
ERCC1-201ENST00000013807 CNTN3Q9P232 1028 aa17.41■□□□□ 0.38
ERCC1-201ENST00000013807 FBXL21Q9UKT6 434 aa17.41■□□□□ 0.38
ERCC1-201ENST00000013807 CDH7Q9ULB5 785 aa17.41■□□□□ 0.38
ERCC1-201ENST00000013807 TBC1D4O60343 1298 aa17.4■□□□□ 0.38
ERCC1-201ENST00000013807 XYLBO75191 536 aa17.4■□□□□ 0.38
ERCC1-201ENST00000013807 ABLIM3O94929 683 aa17.4■□□□□ 0.38
ERCC1-201ENST00000013807 RPL9P32969 192 aaKnown RBP17.4■□□□□ 0.38
ERCC1-201ENST00000013807 YARSP54577 528 aaKnown RBP17.4■□□□□ 0.38
ERCC1-201ENST00000013807 MRPL58Q14197 206 aaKnown RBP17.4■□□□□ 0.38
ERCC1-201ENST00000013807 ZNF568Q3ZCX4 644 aa17.4■□□□□ 0.38
ERCC1-201ENST00000013807 GLRA4Q5JXX5 417 aa17.4■□□□□ 0.38
ERCC1-201ENST00000013807 MPZL3Q6UWV2 235 aa17.4■□□□□ 0.38
ERCC1-201ENST00000013807 GRASPQ7Z6J2 395 aaPredicted RBP17.4■□□□□ 0.38
ERCC1-201ENST00000013807 FLCNQ8NFG4 579 aa17.4■□□□□ 0.38
ERCC1-201ENST00000013807 ZNF461Q8TAF7 563 aa17.4■□□□□ 0.38
ERCC1-201ENST00000013807 TMX3Q96JJ7 454 aa17.4■□□□□ 0.38
ERCC1-201ENST00000013807 SNX27Q96L92 541 aa17.4■□□□□ 0.38
ERCC1-201ENST00000013807 ACAP3Q96P50 834 aa17.4■□□□□ 0.38
ERCC1-201ENST00000013807 PNMA5Q96PV4 448 aa17.4■□□□□ 0.38
ERCC1-201ENST00000013807 AVENQ9NQS1 362 aaPredicted RBP17.4■□□□□ 0.38
ERCC1-201ENST00000013807 KCNH3Q9ULD8 1083 aa17.4■□□□□ 0.38
ERCC1-201ENST00000013807 SYN3O14994 580 aa17.39■□□□□ 0.37
ERCC1-201ENST00000013807 MEFVO15553 781 aaPredicted RBP17.39■□□□□ 0.37
ERCC1-201ENST00000013807 GFRA3O60609 400 aa17.39■□□□□ 0.37
ERCC1-201ENST00000013807 TOM1L1O75674 476 aa17.39■□□□□ 0.37
ERCC1-201ENST00000013807 CFHP08603 1231 aa17.39■□□□□ 0.37
ERCC1-201ENST00000013807 PLS3P13797 630 aa17.39■□□□□ 0.37
ERCC1-201ENST00000013807 SLC12A3P55017 1021 aa17.39■□□□□ 0.37
ERCC1-201ENST00000013807 ZPBP2Q6X784 338 aa17.39■□□□□ 0.37
ERCC1-201ENST00000013807 GET4Q7L5D6 327 aaPredicted RBP17.39■□□□□ 0.37
ERCC1-201ENST00000013807 TMEM161BQ8NDZ6 487 aa17.39■□□□□ 0.37
ERCC1-201ENST00000013807 GOLGA2P5Q9HBQ8 144 aa17.39■□□□□ 0.37
ERCC1-201ENST00000013807 CDY1Q9Y6F8 540 aa17.39■□□□□ 0.37
ERCC1-201ENST00000013807 NUMBLQ9Y6R0 609 aa17.39■□□□□ 0.37
ERCC1-201ENST00000013807 EP300Q09472 2414 aaPredicted RBP17.38■□□□□ 0.37
ERCC1-201ENST00000013807 ARHGEF37A1IGU5 675 aa17.38■□□□□ 0.37
ERCC1-201ENST00000013807 MAPTP10636 758 aaKnown RBP17.38■□□□□ 0.37
ERCC1-201ENST00000013807 SCP2P22307 547 aa17.38■□□□□ 0.37
ERCC1-201ENST00000013807 TKTP29401 623 aaKnown RBP17.38■□□□□ 0.37
ERCC1-201ENST00000013807 SMTNP53814 917 aa17.38■□□□□ 0.37
ERCC1-201ENST00000013807 DTWD2Q8NBA8 298 aa17.38■□□□□ 0.37
ERCC1-201ENST00000013807 SLC7A14Q8TBB6 771 aa17.38■□□□□ 0.37
ERCC1-201ENST00000013807 FGF13Q92913 245 aa17.38■□□□□ 0.37
ERCC1-201ENST00000013807 FGF14Q92915 247 aa17.38■□□□□ 0.37
ERCC1-201ENST00000013807 AK8Q96MA6 479 aa17.38■□□□□ 0.37
ERCC1-201ENST00000013807 ANK1P16157 1881 aa17.37■□□□□ 0.37
ERCC1-201ENST00000013807 SFI1A8K8P3 1242 aa17.37■□□□□ 0.37
ERCC1-201ENST00000013807 SLC16A4O15374 487 aa17.37■□□□□ 0.37
ERCC1-201ENST00000013807 BRCC3P46736 316 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms