RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 RHPN2Q8IUC4 686 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 PSMB7Q99436 277 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.38□□□□□ -1.39
VPS13D-201ENST00000011700 GMEB1Q9Y692 573 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 FAM186AA6NE01 2351 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 M0R2C6 588 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 HIST1H2AGP0C0S8 130 aaPredicted RBP6.38□□□□□ -1.39
VPS13D-201ENST00000011700 HIST1H2ADP20671 130 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 ATICP31939 592 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 HDLBPQ00341 1268 aaKnown RBP6.38□□□□□ -1.39
VPS13D-201ENST00000011700 LINC00301Q8NCQ3 95 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 HIST1H2AHQ96KK5 128 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 HIST1H2AJQ99878 128 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 H2AFJQ9BTM1 129 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 ARMT1Q9H993 441 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 SYTL2Q9HCH5 934 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 DIP2AQ14689 1571 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 PDS5AQ29RF7 1337 aaKnown RBP6.38□□□□□ -1.39
VPS13D-201ENST00000011700 PIGBOS1A0A0B4J2F0 54 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 SYNCRIPO60506 623 aaKnown RBP6.38□□□□□ -1.39
VPS13D-201ENST00000011700 SEMA3DO95025 777 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 POLBP06746 335 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 RALAP11233 206 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 IFNGR2P38484 337 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 NCALDP61601 193 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 MFSD4BQ5TF39 518 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 KCTD16Q68DU8 428 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 NSMFQ6X4W1 530 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 ENKURQ8TC29 256 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 MRPL4Q9BYD3 311 aaKnown RBP6.38□□□□□ -1.39
VPS13D-201ENST00000011700 TRIM13O60858 407 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 KRT6AP02538 564 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 GEMIN4P57678 1058 aaKnown RBP6.38□□□□□ -1.39
VPS13D-201ENST00000011700 MAD2L1Q13257 205 aaPredicted RBP6.38□□□□□ -1.39
VPS13D-201ENST00000011700 MTHFSDQ2M296 383 aaKnown RBP6.38□□□□□ -1.39
VPS13D-201ENST00000011700 FAM83EQ2M2I3 478 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 CYFIP1Q7L576 1253 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 STKLD1Q8NE28 680 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 APPL2Q8NEU8 664 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 ARHGEF26Q96DR7 871 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 ETNK1Q9HBU6 452 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 GEMIN8Q9NWZ8 242 aaKnown RBP6.38□□□□□ -1.39
VPS13D-201ENST00000011700 IMPAD1Q9NX62 359 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 TMEM63CQ9P1W3 806 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 RSL24D1Q9UHA3 163 aaKnown RBP6.38□□□□□ -1.39
VPS13D-201ENST00000011700 GRID1Q9ULK0 1009 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 KPNA1P52294 538 aaPredicted RBP6.38□□□□□ -1.39
VPS13D-201ENST00000011700 EIF1ADQ8N9N8 165 aaKnown RBP6.38□□□□□ -1.39
VPS13D-201ENST00000011700 MRRFQ96E11 262 aaKnown RBP6.38□□□□□ -1.39
VPS13D-201ENST00000011700 HIC2Q96JB3 615 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 PHACTR3Q96KR7 559 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 UBP1Q9NZI7 540 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 MAPK8IP1Q9UQF2 711 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 APOL1O14791 398 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 OXCT1P55809 520 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 DYMQ7RTS9 669 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 DPP9Q86TI2 863 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 RFWD2Q8NHY2 731 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 TESK2Q96S53 571 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 BDH2Q9BUT1 245 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 MYLK2Q9H1R3 596 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 ATP6V1HQ9UI12 483 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 MFHAS1Q9Y4C4 1052 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 E9PCH4 1651 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 RTN2O75298 545 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 RHOBTB3O94955 611 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 VCLP18206 1134 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 PEX6Q13608 980 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 MYLK4Q86YV6 388 aaPredicted RBP6.38□□□□□ -1.39
VPS13D-201ENST00000011700 RTKN2Q8IZC4 609 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 CASP10Q92851 521 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 KATNAL1Q9BW62 490 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 BUB1O43683 1085 aa6.37□□□□□ -1.39
VPS13D-201ENST00000011700 BMP3P12645 472 aa6.37□□□□□ -1.39
VPS13D-201ENST00000011700 SNAP25P60880 206 aa6.37□□□□□ -1.39
VPS13D-201ENST00000011700 TFAMQ00059 246 aaKnown RBP6.37□□□□□ -1.39
VPS13D-201ENST00000011700 CENPCQ03188 943 aa6.37□□□□□ -1.39
VPS13D-201ENST00000011700 VEPH1Q14D04 833 aa6.37□□□□□ -1.39
VPS13D-201ENST00000011700 CYP4F22Q6NT55 531 aa6.37□□□□□ -1.39
VPS13D-201ENST00000011700 LCA5Q86VQ0 697 aa6.37□□□□□ -1.39
VPS13D-201ENST00000011700 GJA10Q969M2 543 aa6.37□□□□□ -1.39
VPS13D-201ENST00000011700 CATSPER2Q96P56 530 aa6.37□□□□□ -1.39
VPS13D-201ENST00000011700 PARD6BQ9BYG5 372 aa6.37□□□□□ -1.39
VPS13D-201ENST00000011700 RAD21L1Q9H4I0 556 aa6.37□□□□□ -1.39
VPS13D-201ENST00000011700 DDX28Q9NUL7 540 aaKnown RBP6.37□□□□□ -1.39
VPS13D-201ENST00000011700 ADA2Q9NZK5 511 aa6.37□□□□□ -1.39
VPS13D-201ENST00000011700 CORO2BQ9UQ03 480 aa6.37□□□□□ -1.39
VPS13D-201ENST00000011700 PLAAQ9Y263 795 aa6.37□□□□□ -1.39
VPS13D-201ENST00000011700 C15orf38-AP3S2A0A0A6YYH1 394 aa6.37□□□□□ -1.39
VPS13D-201ENST00000011700 MAGEB16A2A368 324 aa6.37□□□□□ -1.39
VPS13D-201ENST00000011700 INO80B-WBP1J3KQ70 363 aa6.37□□□□□ -1.39
VPS13D-201ENST00000011700 PSTPIP1O43586 416 aa6.37□□□□□ -1.39
VPS13D-201ENST00000011700 TIMM44O43615 452 aa6.37□□□□□ -1.39
VPS13D-201ENST00000011700 INAQ16352 499 aa6.37□□□□□ -1.39
VPS13D-201ENST00000011700 ARPINQ7Z6K5 226 aa6.37□□□□□ -1.39
VPS13D-201ENST00000011700 TSPYL6Q8N831 410 aa6.37□□□□□ -1.39
VPS13D-201ENST00000011700 AP3S1Q92572 193 aa6.37□□□□□ -1.39
VPS13D-201ENST00000011700 RSAD1Q9HA92 442 aa6.37□□□□□ -1.39
VPS13D-201ENST00000011700 ANAPC7Q9UJX3 599 aa6.37□□□□□ -1.39
VPS13D-201ENST00000011700 CDYLQ9Y232 598 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms