RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 SmapQ9R0P4 181 aaKnown RBP12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Scgb2b21A0A087WQA9 112 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Gm11549A0A286YD83 63 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Vmn2r63E9Q0K5 859 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Gm9268E9Q0M3 861 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Vmn2r62K7N712 859 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Slc27a2O35488 620 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Mt-CybP00158 381 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Akr1b7P21300 316 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Nrp1P97333 923 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Brd9Q3UQU0 596 aaKnown RBP12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Cnga4Q3UW12 575 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Klra7Q60654 280 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Tfap2bQ61313 459 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Plk4Q64702 925 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 PawrQ925B0 333 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 NptxrQ99J85 493 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Q99KU6 348 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Nsmce1Q9D720 266 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Ddx24Q9ESV0 857 aaKnown RBP12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Nphs1Q9QZS7 1256 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Lypla2Q9WTL7 231 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Gm15262A0A140LIQ5 728 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Glt1d1A4FUP9 346 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Fam47eD3YWC7 402 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Speer4f2E9Q366 295 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Gm6588E9Q3K0 461 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Magea4F2Z493 315 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Gm7995L7N2E4 160 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Usp35M0QWN7 1009 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Pih1d3Q3KNI6 218 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Rnf10Q3UIW5 804 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Lgr6Q3UVD5 967 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 E2f8Q58FA4 860 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Xpnpep1Q6P1B1 623 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Rhbdf2Q80WQ6 827 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 NemfQ8CCP0 1064 aaKnown RBP12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Snf8Q9CZ28 258 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 PrameQ9D4Z5 464 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Prss23Q9D6X6 382 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Htra2Q9JIY5 458 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Hao1Q9WU19 370 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Mical3Q8CJ19 1993 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Ets2P15037 468 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Mmp14P53690 582 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Spink5Q148R4 1017 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Fam193bQ3U2K0 892 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Znf652Q5DU09 608 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Cyfip1Q7TMB8 1253 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Q80WR5 230 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 TbckQ8BM85 762 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Trerf1Q8BXJ2 1205 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Ppm1kQ8BXN7 372 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Serpinb13Q8CDC0 389 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Gnl3Q8CI11 538 aaKnown RBP12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 MyripQ8K3I4 856 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Ciapin1Q8WTY4 309 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Ces1fQ91WU0 561 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Pls3Q99K51 630 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Setd6Q9CWY3 473 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Rgs17Q9QZB0 210 aa12.3□□□□□ -0.44
Col9a1-202ENSMUST00000088349 C87977A2A958 498 aa12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Pitpnm1O35954 1243 aa12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Trim43bP86448 445 aa12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Tom1l2Q5SRX1 507 aa12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Orc2Q60862 576 aaKnown RBP12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 WlsQ6DID7 541 aa12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Vat1lQ80TB8 417 aa12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 RbakQ8BQC8 711 aa12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Fbxo43Q8CDI2 640 aa12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Spire2Q8K1S6 718 aa12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Havcr2Q8VIM0 281 aa12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 YwhabQ9CQV8 246 aaKnown RBP12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Mrpl2Q9D773 306 aaKnown RBP12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Sapcd2Q9D818 391 aa12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Kcnq4Q9JK97 696 aa12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Gm5795E9PZN8 263 aa12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Zfp275G3X904 499 aa12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 RpsaP14206 295 aaKnown RBP12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 AdssP46664 456 aa12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 FaxcQ3UMF9 409 aa12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 SkiQ60698 725 aa12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Pla2g4cQ64GA5 597 aa12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Msantd2Q6NZR2 559 aa12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Ddhd1Q80YA3 547 aa12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Man2a2Q8BRK9 1152 aa12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Gm13084A2A8N0 494 aa12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Ebf2O08792 575 aa12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Banf1O54962 89 aa12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Psmc4P54775 418 aa12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Skap1Q3UUV5 355 aa12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Zswim6Q80TB7 1207 aa12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Heatr3Q8BQM4 679 aa12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Slc12a8Q8VI23 705 aa12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Dnajc3Q91YW3 504 aa12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Gyg1Q9R062 333 aa12.29□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Olfr310B2RVZ1 332 aa12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Speer2E9Q9U2 264 aa12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Alkbh1P0CB42 389 aa12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Ces1cP23953 554 aa12.28□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms