RNA–Protein interactions for RNA: ENSMUST00000062606.7

Upk3b-201, Transcript of Uroplakin-3b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk3b, Length 3,530 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3b-201ENSMUST00000062606 Fbxo10Q7TQF2 950 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Pnma2Q8BHK0 365 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 StambpQ9CQ26 424 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Ccdc43Q9CR29 222 aaKnown RBP12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Sf3a3Q9D554 501 aaKnown RBP12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Tbx20Q9ES03 445 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Arl6ip4Q9JM93 229 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Mia3Q8BI84 1930 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Slc9a3G3X939 829 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Sptlc1O35704 473 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Timm44O35857 452 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Cyp2b10P12791 500 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Taf1bP97358 586 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Trim43aQ3TL54 445 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Krt87Q6IMF0 495 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Smarca1Q6PGB8 1046 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Kcnv2Q8CFS6 562 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Ccdc14Q8K2J4 934 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Kiaa1024Q8K3V7 917 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Stap2Q8R0L1 411 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Hexim1Q8R409 356 aaKnown RBP12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Fbxo21Q8VDH1 627 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Txndc5Q91W90 417 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Smc6Q924W5 1097 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Tmem68Q9D850 329 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Slc40a1Q9JHI9 570 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Atad5Q4QY64 1826 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Samd15F6XZJ7 620 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Srpk1O70551 648 aaKnown RBP12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Rit2P70425 217 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Trappc3lQ4KL14 181 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 ChpfQ6IQX7 774 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Krit1Q6S5J6 736 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Cep128Q8BI22 1102 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Commd10Q8JZY2 202 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Znf687Q9D2D7 1237 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Spock2Q9ER58 423 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 MtrA6H5Y3 1253 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Agbl1Q09M05 972 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Cyp7b1Q60991 507 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Cdkn2aipQ8BI72 563 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Ttc39cQ8VE09 580 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Dnajc18Q9CZJ9 357 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Krtap5-3Q9D226 196 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Rbp7Q9EPC5 134 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Ercc4Q9QZD4 917 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Ugt1a8D3Z748 530 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Ugt1a10E9PXN7 530 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Acsbg2Q2XU92 667 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 StimateQ3UF25 288 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Jade2Q6ZQF7 829 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Ttc26Q8BS45 554 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 RalylQ8BTF8 293 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Hacd3Q8K2C9 362 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 BphlQ8R164 291 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Trim29Q8R2Q0 587 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Slc12a8Q8VI23 705 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Dnajc3Q91YW3 504 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Ivns1abpQ920Q8 642 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Pabpc6Q9D4E6 643 aaKnown RBP12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Galntl5Q9D4M9 431 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 1700109H08RikQ9D9C0 210 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Tsc1Q9EP53 1161 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Gm1141B9EJU1 475 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Dnm2P39054 870 aaKnown RBP12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Lpar1P61793 364 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Pbxip1Q3TVI8 727 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Sun3Q5SS91 320 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Ppp2r5cQ60996 524 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Gpd2Q64521 727 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Serpina3fQ80X76 445 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Vwa5aQ99KC8 793 aaKnown RBP12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Krt23Q99PS0 422 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Krt34Q9D646 392 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Tll2Q9WVM6 1012 aa12.79□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Cylc2B1AWN8 422 aa12.78□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Kif28pD3YXS5 1028 aa12.78□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Pcdha4O88689 947 aa12.78□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Hexim2Q3TVI4 313 aa12.78□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Antxr2Q6DFX2 487 aa12.78□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Csrnp2Q8BGQ2 534 aa12.78□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Mrpl58Q8R035 206 aa12.78□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Hdhd5Q91WM2 419 aa12.78□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Elp3Q9CZX0 547 aa12.78□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Mipol1Q9D9F8 279 aa12.78□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Olr1Q9EQ09 363 aa12.78□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Arih1Q9Z1K5 555 aa12.78□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Gm43738A0A0G2JEA5 862 aa12.78□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Ldlrad1D3YYZ1 218 aa12.78□□□□□ -0.36
Upk3b-201ENSMUST00000062606 AoahO35298 574 aa12.78□□□□□ -0.36
Upk3b-201ENSMUST00000062606 GpiP06745 558 aaKnown RBP12.78□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Enpp1P06802 906 aa12.78□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Fgfr4Q03142 799 aa12.78□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Tmem184cQ3TPR7 525 aa12.78□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Git1Q68FF6 770 aa12.78□□□□□ -0.36
Upk3b-201ENSMUST00000062606 NfrkbQ6PIJ4 1296 aaKnown RBP12.78□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Paip2bQ91W45 136 aa12.78□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Il20Q9JKV9 176 aa12.78□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Cacna2d3Q9Z1L5 1091 aa12.78□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Gm28360A0A087WR25 190 aa12.78□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 38.2 ms