RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 rp9P97762 213 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 EnahQ03173 802 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Zfp957Q3UT76 567 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Wbp11Q923D5 641 aaKnown RBP10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Setd6Q9CWY3 473 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ubiad1Q9DC60 336 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Sv2aQ9JIS5 742 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Magea2Q9R2A2 320 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Lrrc63A6H694 637 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Prl6a1O35257 230 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Cd68P31996 326 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 PctpP53808 214 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Kcnn2P58390 839 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Abl2Q4JIM5 1182 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Rhot1Q8BG51 631 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Pgm1Q9D0F9 562 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 IydQ9DCX8 285 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Cnga3Q9JJZ8 631 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Diaph3Q9Z207 1171 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 SynrgQ5SV85 1306 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Zscan4-ps3A0A1B0GRH6 506 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Zscan4-ps2A0A1C7CYU6 506 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Rfx8D3YU81 596 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Lmnb1P14733 588 aaKnown RBP10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Fmr1P35922 614 aaKnown RBP10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Rnf113a2Q14B01 337 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Rnf10Q3UIW5 804 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Lgr6Q3UVD5 967 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Wdr27Q8C5V5 780 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Cwf19l1Q8CI33 537 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Nr3c2Q8VII8 978 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Polr3fQ921X6 316 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Q9D2Q3 444 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ttc33Q9D6K7 262 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Lactbl1S4R213 581 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 MtrA6H5Y3 1253 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 JrklB2RRL2 523 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Slc10a5Q5PT54 434 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Rab34Q64008 259 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Slc9c1Q6UJY2 1175 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ntrk3Q6VNS1 825 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Tmem145Q8C4U2 746 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Kat14Q8CID0 779 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Trim68Q8K243 485 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Pcdhb12Q91Y07 789 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Slc12a6Q924N4 1150 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Atad3Q925I1 591 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Tgm5Q9D7I9 724 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Mzf1S4R1L6 814 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ace3D0G895 737 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ccnyl1D3YUJ3 367 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Pdk4O70571 412 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Alkbh1P0CB42 389 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Cul4aQ3TCH7 759 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Sult1d1Q3UZZ6 295 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Snx25Q3ZT31 840 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Znf652Q5DU09 608 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 AlcamQ61490 583 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Rps6ka6Q7TPS0 764 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Sh3tc2Q80VA5 1289 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ddhd1Q80YA3 547 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Slc7a14Q8BXR1 771 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Mill1Q8HWE7 395 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Arhgap18Q8K0Q5 663 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Trappc12Q8K2L8 797 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Znf354bQ9QXT9 601 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Uts2Q9QZQ3 123 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Nphs1Q9QZS7 1256 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Anapc7Q9WVM3 565 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 SufuQ9Z0P7 484 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 FAM186AQ9D9R9 1790 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Apba3O88888 571 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Fcer2P20693 331 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Fen1P39749 378 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Upf3bQ3ULL6 472 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Bpifb5Q3UQ05 490 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 OgdhQ60597 1023 aaKnown RBP10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 LdhdQ7TNG8 484 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Tbc1d22bQ80VE5 505 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ago2Q8CJG0 860 aaKnown RBP10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Taco1Q8K0Z7 294 aaKnown RBP10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Tjap1Q9DCD5 539 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Tjp3Q9QXY1 905 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Smok2bQ9QYZ3 484 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Smok2aQ9QYZ6 504 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Hao1Q9WU19 370 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ltn1Q6A009 1767 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Pitpnm2Q6ZPQ6 1335 aa10.31□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Gm11985A0A1B0GS61 206 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Cyth3O08967 399 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Rbp3P49194 1234 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Dab2P98078 766 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Tab3Q571K4 716 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Tfe3Q64092 572 aaKnown RBP10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Kif11Q6P9P6 1052 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ush1gQ80T11 461 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 1700013H16RikQ9DAC5 291 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Krt7Q9DCV7 457 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Psmg1Q9JK23 289 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Klrc2Q9WTJ9 238 aa10.3□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 32.1 ms