RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Krt15Q61414 452 aa24.55■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Podnl1Q6P3Y9 559 aa24.55■■□□□ 1.52
Upf3a-201ENSMUST00000043767 PoliQ6R3M4 717 aa24.55■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Rpf1Q7TND5 349 aaKnown RBP24.55■■□□□ 1.52
Upf3a-201ENSMUST00000043767 CalcbQ99MP3 130 aa24.55■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Spata31d1aE9QA35 1336 aa24.55■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Gm3164L7N2B9 238 aa24.55■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Gm3264L7N2C5 238 aa24.55■■□□□ 1.52
Upf3a-201ENSMUST00000043767 BC051142Q3V0M8 400 aa24.55■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Sema4bQ62179 823 aa24.55■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Papd7Q6PB75 542 aa24.55■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Rint1Q8BZ36 792 aa24.55■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Gnl3Q8CI11 538 aaKnown RBP24.55■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Eif3cQ8R1B4 911 aaKnown RBP24.55■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Itgbl1Q8VDV0 494 aa24.55■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Kcnq4Q9JK97 696 aa24.55■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Eif2ak3Q9Z2B5 1114 aa24.55■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Celf4Q7TSY6 486 aa24.54■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Maip1Q8BHE8 291 aa24.54■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Aldh5a1Q8BWF0 523 aa24.54■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Stxbp5Q8K400 1152 aaKnown RBP24.54■■□□□ 1.52
Upf3a-201ENSMUST00000043767 VasnQ9CZT5 673 aa24.54■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Prpf40aQ9R1C7 953 aaKnown RBP24.54■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Psma7Q9Z2U0 248 aa24.54■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Slc16a6B1AT66 607 aa24.54■■□□□ 1.52
Upf3a-201ENSMUST00000043767 SPINDOCQ05AH6 381 aa24.54■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Ano7Q14AT5 859 aa24.54■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Cep70Q6IQY5 616 aa24.54■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Lrig3Q6P1C6 1117 aa24.54■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Syf2Q9D198 242 aaKnown RBP24.54■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Asah2Q9JHE3 756 aa24.54■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Tcp11Q01755 566 aa24.53■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Slc20a2Q80UP8 656 aa24.53■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Zswim4Q8C7B8 1101 aa24.53■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Cdc42ep4Q9JM96 349 aaKnown RBP24.53■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Ube3aO08759 870 aa24.52■■□□□ 1.52
Upf3a-201ENSMUST00000043767 GlrbP48168 496 aa24.52■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Ctdp1Q7TSG2 960 aa24.52■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Gm4846B2RWH8 538 aa24.52■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Vmn2r55G3UWZ4 781 aa24.52■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Vmn2r53L7N473 806 aa24.52■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Snx12O70493 165 aa24.52■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Lrrc4bP0C192 709 aa24.52■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Gad1P48318 593 aa24.52■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Tmtc1Q3UV71 942 aa24.52■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Phc3Q8CHP6 981 aa24.52■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Tdrd7Q8K1H1 1086 aaKnown RBP24.52■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Ttc1Q91Z38 292 aa24.52■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Wfdc1Q9ESH5 211 aa24.52■■□□□ 1.52
Upf3a-201ENSMUST00000043767 PollQ9QXE2 573 aaKnown RBP24.52■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Dnajb7Q9QYI8 312 aa24.52■■□□□ 1.52
Upf3a-201ENSMUST00000043767 Osbpl7A2A716 963 aa24.51■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Cbfa2t2O70374 594 aa24.51■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Ppm1jQ149T7 507 aa24.51■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Palb2Q3U0P1 1104 aa24.51■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Ccdc42Q5SV66 316 aa24.51■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Gas8Q60779 478 aa24.51■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Tmem260Q8BMD6 703 aa24.51■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Taco1Q8K0Z7 294 aaKnown RBP24.51■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Olfr393Q8VGR6 312 aa24.51■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Dbndd2Q9CRD4 158 aa24.51■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Xrn2Q9DBR1 951 aaKnown RBP24.51■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Hsd3b7Q9EQC1 369 aa24.51■■□□□ 1.51
Upf3a-201ENSMUST00000043767 GraspQ9JJA9 392 aa24.51■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Glud1P26443 558 aaKnown RBP24.5■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Nub1P54729 614 aa24.5■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Kcnq1P97414 668 aa24.5■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Cyp3a16Q64481 504 aa24.5■■□□□ 1.51
Upf3a-201ENSMUST00000043767 VwdeQ6DFV8 926 aa24.5■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Olfr23Q7TRX4 325 aa24.5■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Phka2Q8BWJ3 1235 aa24.5■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Dmtf1Q8CE22 761 aa24.5■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Sar1bQ9CQC9 198 aa24.5■■□□□ 1.51
Upf3a-201ENSMUST00000043767 HttP42859 3119 aa24.5■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Prdm12A2AJ77 365 aa24.5■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Rgs22G3UYX5 1258 aa24.5■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Vgll3P85442 326 aa24.5■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Ica1lQ3TY65 431 aa24.5■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Myl6Q60605 151 aaKnown RBP24.5■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Ddx3yQ62095 658 aaKnown RBP24.5■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Sh3gl1Q62419 368 aa24.5■■□□□ 1.51
Upf3a-201ENSMUST00000043767 IqceQ6PCQ0 778 aa24.5■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Gpt2Q8BGT5 522 aa24.5■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Fam160b1Q8CDM8 764 aa24.5■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Gdap1l1Q8VE33 370 aa24.5■■□□□ 1.51
Upf3a-201ENSMUST00000043767 VillQ91YD6 859 aa24.5■■□□□ 1.51
Upf3a-201ENSMUST00000043767 FcrlaQ920A9 352 aa24.5■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Rnf25Q9QZR0 456 aa24.5■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Fut8Q9WTS2 575 aa24.5■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Atp6v0a1Q9Z1G4 839 aaKnown RBP24.5■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Ttc13A0A1L1SSC7 844 aa24.49■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Gm6133B2RY53 190 aa24.49■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Pate3B3GLJ3 98 aa24.49■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Gm3252E9PUT9 216 aa24.49■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Olfr552E9Q545 317 aa24.49■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Gm3468E9QAJ8 216 aa24.49■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Pth1rP41593 591 aa24.49■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Stat4P42228 749 aa24.49■■□□□ 1.51
Upf3a-201ENSMUST00000043767 NrcamQ810U4 1256 aa24.49■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Chst7Q9EP78 484 aa24.49■■□□□ 1.51
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms