RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Hars2Q99KK9 505 aa13.57□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Ebag9Q9D0V7 213 aa13.57□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Spock2Q9ER58 423 aa13.57□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Ttc17E9PVB5 1198 aa13.56□□□□□ -0.24
Rnf4-201ENSMUST00000030992 CaluO35887 315 aa13.56□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Shox2P70390 331 aa13.56□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Cracr2aQ3UP38 310 aa13.56□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Klra3Q64329 266 aa13.56□□□□□ -0.24
Rnf4-201ENSMUST00000030992 IqceQ6PCQ0 778 aa13.56□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Mapk15Q80Y86 549 aa13.56□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Creb3l2Q8BH52 521 aa13.56□□□□□ -0.24
Rnf4-201ENSMUST00000030992 6820408C15RikQ8BJX2 354 aa13.56□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Fbxl5Q8C2S5 690 aa13.56□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Caskin2Q8VHK1 1201 aa13.56□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Cdca7Q9D0M2 382 aa13.56□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Mrpl2Q9D773 306 aaKnown RBP13.56□□□□□ -0.24
Rnf4-201ENSMUST00000030992 TroapB7ZNG4 668 aa13.56□□□□□ -0.24
Rnf4-201ENSMUST00000030992 GssP51855 474 aa13.56□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Dsg1aQ61495 1057 aa13.56□□□□□ -0.24
Rnf4-201ENSMUST00000030992 LnpkQ7TQ95 425 aa13.56□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Tor4aQ8BH02 426 aa13.56□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Ces1fQ91WU0 561 aa13.56□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Slc12a9Q99MR3 914 aa13.56□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Klrc2Q9WTJ9 238 aa13.56□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Trip11E9Q512 1976 aa13.55□□□□□ -0.24
Rnf4-201ENSMUST00000030992 IqccA2ADZ8 418 aa13.55□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Nr3c1P06537 783 aa13.55□□□□□ -0.24
Rnf4-201ENSMUST00000030992 IvlP48997 467 aa13.55□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Ppp1r12cQ3UMT1 782 aa13.55□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Tgfbrap1Q3UR70 860 aa13.55□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Fbxw10Q5SUS0 1030 aa13.55□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Stip1Q60864 543 aaKnown RBP13.55□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Znf507Q6ZPY5 941 aa13.55□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Def6Q8C2K1 630 aa13.55□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Slc35f6Q8VE96 372 aa13.55□□□□□ -0.24
Rnf4-201ENSMUST00000030992 MlxiplQ99MZ3 864 aa13.55□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Capn12Q9ER56 720 aa13.55□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Tnip1Q9WUU8 647 aa13.55□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Gm11549A0A286YD83 63 aa13.55□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Serpinb3aG3X9V8 387 aa13.55□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Chmp6P0C0A3 200 aa13.55□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Msh2P43247 935 aaKnown RBP13.55□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Nub1P54729 614 aa13.55□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Vamp7P70280 220 aa13.55□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Dab2ipQ3UHC7 1189 aa13.55□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Zcwpw1Q6IR42 630 aa13.55□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Bicd1Q8BR07 835 aa13.55□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Zcchc8Q9CYA6 709 aaKnown RBP13.55□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Ftsj3Q9DBE9 838 aaKnown RBP13.55□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Dgcr8Q9EQM6 773 aa13.55□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Gkap1Q9JMB0 366 aa13.55□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Arhgef10Q8C033 1345 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 D830030K20RikE9PYQ5 218 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Gm3043K7N693 218 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Gm16440K7N6G6 218 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Gm2244L7N2A3 218 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Gm3278L7N2D2 218 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Gm8271L7N2E2 218 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Apba3O88888 571 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 TxkP42682 527 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 NsfP46460 744 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Srd5a1Q68FF9 255 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Snx19Q6P4T1 997 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Gpr156Q6PCP7 798 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Dcaf15Q6PFH3 600 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Ddx55Q6ZPL9 600 aaKnown RBP13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Mrpl58Q8R035 206 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 PawrQ925B0 333 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Clk2O35491 499 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 ZfxP17012 799 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Rad54lP70270 747 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Erich4Q3UNU4 136 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 DeptorQ570Y9 409 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Kctd16Q5DTY9 427 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Slc30a9Q5IRJ6 567 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Acbd5Q5XG73 508 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Supt20hQ7TT00 530 aaKnown RBP13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Tmem206Q9D771 350 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Cst12Q9DAN8 128 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Actn2Q9JI91 894 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Rnf4Q9QZS2 194 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Slc26a3Q9WVC8 757 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Mtmr1Q9Z2C4 669 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 EloblA6PWE0 161 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Gm4841E9QAA8 417 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Timm44O35857 452 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Fam83hQ148V8 1209 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Rrp36Q3UFY0 244 aaKnown RBP13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Vps72Q62481 368 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Bank1Q80VH0 783 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Enoph1Q8BGB7 257 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Btbd6Q8K2J9 488 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Fgd4Q91ZT5 766 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 NptxrQ99J85 493 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Isl2Q9CXV0 359 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Cables1Q9ESJ1 568 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Dkc1Q9ESX5 509 aaKnown RBP13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Rgs17Q9QZB0 210 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Phf2Q9WTU0 1096 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Tnfsf13bQ9WU72 309 aa13.54□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 35.7 ms