RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 BRSK2Q8IWQ3 736 aa14.06□□□□□ -0.16
PHGDH-218ENST00000641491 CCDC127Q96BQ5 260 aa14.06□□□□□ -0.16
PHGDH-218ENST00000641491 EEF2KMTQ96G04 330 aa14.06□□□□□ -0.16
PHGDH-218ENST00000641491 TRAIPQ9BWF2 469 aa14.06□□□□□ -0.16
PHGDH-218ENST00000641491 MRPL9Q9BYD2 267 aaKnown RBP14.06□□□□□ -0.16
PHGDH-218ENST00000641491 UBE2OQ9C0C9 1292 aaKnown RBP14.06□□□□□ -0.16
PHGDH-218ENST00000641491 IKZF4Q9H2S9 585 aa14.06□□□□□ -0.16
PHGDH-218ENST00000641491 TMX1Q9H3N1 280 aa14.06□□□□□ -0.16
PHGDH-218ENST00000641491 MMRN2Q9H8L6 949 aa14.06□□□□□ -0.16
PHGDH-218ENST00000641491 PLEKHA5Q9HAU0 1116 aa14.06□□□□□ -0.16
PHGDH-218ENST00000641491 PTPRHQ9HD43 1115 aa14.06□□□□□ -0.16
PHGDH-218ENST00000641491 SLC38A7Q9NVC3 462 aa14.06□□□□□ -0.16
PHGDH-218ENST00000641491 FANCLQ9NW38 375 aa14.06□□□□□ -0.16
PHGDH-218ENST00000641491 TMEM161AQ9NX61 479 aa14.06□□□□□ -0.16
PHGDH-218ENST00000641491 INPP5FQ9Y2H2 1132 aa14.06□□□□□ -0.16
PHGDH-218ENST00000641491 TTLL13PA6NNM8 815 aa14.05□□□□□ -0.16
PHGDH-218ENST00000641491 AKAP3O75969 853 aa14.05□□□□□ -0.16
PHGDH-218ENST00000641491 CXCL8P10145 99 aa14.05□□□□□ -0.16
PHGDH-218ENST00000641491 AKAP5P24588 427 aa14.05□□□□□ -0.16
PHGDH-218ENST00000641491 ADSSP30520 456 aa14.05□□□□□ -0.16
PHGDH-218ENST00000641491 VAMP7P51809 220 aa14.05□□□□□ -0.16
PHGDH-218ENST00000641491 AP3M2P53677 418 aa14.05□□□□□ -0.16
PHGDH-218ENST00000641491 TFAMQ00059 246 aaKnown RBP14.05□□□□□ -0.16
PHGDH-218ENST00000641491 CYP24A1Q07973 514 aa14.05□□□□□ -0.16
PHGDH-218ENST00000641491 BFSP1Q12934 665 aa14.05□□□□□ -0.16
PHGDH-218ENST00000641491 BIRC3Q13489 604 aa14.05□□□□□ -0.16
PHGDH-218ENST00000641491 TMEM132DQ14C87 1099 aa14.05□□□□□ -0.16
PHGDH-218ENST00000641491 SEZ6Q53EL9 994 aa14.05□□□□□ -0.16
PHGDH-218ENST00000641491 SPOUT1Q5T280 376 aaKnown RBP14.05□□□□□ -0.16
PHGDH-218ENST00000641491 FAM109BQ6ICB4 259 aaPredicted RBP14.05□□□□□ -0.16
PHGDH-218ENST00000641491 CBWD2Q8IUF1 395 aa14.05□□□□□ -0.16
PHGDH-218ENST00000641491 DHX40Q8IX18 779 aaKnown RBP14.05□□□□□ -0.16
PHGDH-218ENST00000641491 BEST2Q8NFU1 509 aa14.05□□□□□ -0.16
PHGDH-218ENST00000641491 TMEM174Q8WUU8 243 aa14.05□□□□□ -0.16
PHGDH-218ENST00000641491 KIF12Q96FN5 646 aa14.05□□□□□ -0.16
PHGDH-218ENST00000641491 PCMTD1Q96MG8 357 aaPredicted RBP14.05□□□□□ -0.16
PHGDH-218ENST00000641491 TSPAN18Q96SJ8 248 aa14.05□□□□□ -0.16
PHGDH-218ENST00000641491 DUSP9Q99956 384 aaKnown RBP14.05□□□□□ -0.16
PHGDH-218ENST00000641491 IMPG2Q9BZV3 1241 aa14.05□□□□□ -0.16
PHGDH-218ENST00000641491 ELAC1Q9H777 363 aaKnown RBP14.05□□□□□ -0.16
PHGDH-218ENST00000641491 PRDM6Q9NQX0 595 aa14.05□□□□□ -0.16
PHGDH-218ENST00000641491 KANSL3Q9P2N6 904 aa14.05□□□□□ -0.16
PHGDH-218ENST00000641491 HES2Q9Y543 173 aa14.05□□□□□ -0.16
PHGDH-218ENST00000641491 SLC4A7Q9Y6M7 1214 aa14.05□□□□□ -0.16
PHGDH-218ENST00000641491 VCANP13611 3396 aa14.05□□□□□ -0.16
PHGDH-218ENST00000641491 TANC1Q9C0D5 1861 aa14.04□□□□□ -0.16
PHGDH-218ENST00000641491 ENPP3O14638 875 aa14.04□□□□□ -0.16
PHGDH-218ENST00000641491 MGEA5O60502 916 aa14.04□□□□□ -0.16
PHGDH-218ENST00000641491 ZNF623O75123 536 aa14.04□□□□□ -0.16
PHGDH-218ENST00000641491 ITGB8P26012 769 aa14.04□□□□□ -0.16
PHGDH-218ENST00000641491 MLH1P40692 756 aa14.04□□□□□ -0.16
PHGDH-218ENST00000641491 TNFSF9P41273 254 aa14.04□□□□□ -0.16
PHGDH-218ENST00000641491 TRPC3Q13507 836 aa14.04□□□□□ -0.16
PHGDH-218ENST00000641491 DSC3Q14574 896 aa14.04□□□□□ -0.16
PHGDH-218ENST00000641491 TCP11X2Q5H9J9 407 aa14.04□□□□□ -0.16
PHGDH-218ENST00000641491 UBXN11Q5T124 520 aa14.04□□□□□ -0.16
PHGDH-218ENST00000641491 LRRC55Q6ZSA7 311 aa14.04□□□□□ -0.16
PHGDH-218ENST00000641491 ZNF365Q70YC5 407 aa14.04□□□□□ -0.16
PHGDH-218ENST00000641491 NT5DC4Q86YG4 428 aa14.04□□□□□ -0.16
PHGDH-218ENST00000641491 RNPC3Q96LT9 517 aaKnown RBP14.04□□□□□ -0.16
PHGDH-218ENST00000641491 YME1L1Q96TA2 773 aa14.04□□□□□ -0.16
PHGDH-218ENST00000641491 ASB7Q9H672 318 aa14.04□□□□□ -0.16
PHGDH-218ENST00000641491 DMAC2Q9NW81 257 aa14.04□□□□□ -0.16
PHGDH-218ENST00000641491 CPSF3Q9UKF6 684 aaKnown RBP14.04□□□□□ -0.16
PHGDH-218ENST00000641491 C9IYK1 514 aa14.03□□□□□ -0.16
PHGDH-218ENST00000641491 AFPP02771 609 aaKnown RBP14.03□□□□□ -0.16
PHGDH-218ENST00000641491 THP07101 528 aa14.03□□□□□ -0.16
PHGDH-218ENST00000641491 ATF7P17544 494 aaPredicted RBP14.03□□□□□ -0.16
PHGDH-218ENST00000641491 CASP4P49662 377 aa14.03□□□□□ -0.16
PHGDH-218ENST00000641491 WDR5P61964 334 aaKnown RBP14.03□□□□□ -0.16
PHGDH-218ENST00000641491 ENPEPQ07075 957 aa14.03□□□□□ -0.16
PHGDH-218ENST00000641491 PSMD6Q15008 389 aa14.03□□□□□ -0.16
PHGDH-218ENST00000641491 MAN2A1Q16706 1144 aa14.03□□□□□ -0.16
PHGDH-218ENST00000641491 DUOXA2Q1HG44 320 aa14.03□□□□□ -0.16
PHGDH-218ENST00000641491 WDR49Q8IV35 697 aa14.03□□□□□ -0.16
PHGDH-218ENST00000641491 CEP120Q8N960 986 aa14.03□□□□□ -0.16
PHGDH-218ENST00000641491 TMC2Q8TDI7 906 aa14.03□□□□□ -0.16
PHGDH-218ENST00000641491 LPPQ93052 612 aa14.03□□□□□ -0.16
PHGDH-218ENST00000641491 SNX27Q96L92 541 aa14.03□□□□□ -0.16
PHGDH-218ENST00000641491 GUCD1Q96NT3 240 aa14.03□□□□□ -0.16
PHGDH-218ENST00000641491 SLC9A7Q96T83 725 aa14.03□□□□□ -0.16
PHGDH-218ENST00000641491 CGRRF1Q99675 332 aa14.03□□□□□ -0.16
PHGDH-218ENST00000641491 TUBGCP2Q9BSJ2 902 aa14.03□□□□□ -0.16
PHGDH-218ENST00000641491 SAMSN1Q9NSI8 373 aaKnown RBP14.03□□□□□ -0.16
PHGDH-218ENST00000641491 KLK14Q9P0G3 267 aa14.03□□□□□ -0.16
PHGDH-218ENST00000641491 DERAQ9Y315 318 aa14.03□□□□□ -0.16
PHGDH-218ENST00000641491 CARNS1A5YM72 827 aa14.02□□□□□ -0.17
PHGDH-218ENST00000641491 TBKBP1A7MCY6 615 aa14.02□□□□□ -0.17
PHGDH-218ENST00000641491 GOLGA6L6A8MZA4 724 aa14.02□□□□□ -0.17
PHGDH-218ENST00000641491 KRT19P08727 400 aa14.02□□□□□ -0.17
PHGDH-218ENST00000641491 PIK3CAP42336 1068 aa14.02□□□□□ -0.17
PHGDH-218ENST00000641491 MXI1P50539 228 aa14.02□□□□□ -0.17
PHGDH-218ENST00000641491 MYL7Q01449 175 aa14.02□□□□□ -0.17
PHGDH-218ENST00000641491 GRIK3Q13003 919 aa14.02□□□□□ -0.17
PHGDH-218ENST00000641491 IQCB1Q15051 598 aa14.02□□□□□ -0.17
PHGDH-218ENST00000641491 ENOX2Q16206 610 aaKnown RBP14.02□□□□□ -0.17
PHGDH-218ENST00000641491 NOMO2Q5JPE7 1267 aa14.02□□□□□ -0.17
PHGDH-218ENST00000641491 ZBTB41Q5SVQ8 909 aa14.02□□□□□ -0.17
PHGDH-218ENST00000641491 FAM117BQ6P1L5 589 aa14.02□□□□□ -0.17
PHGDH-218ENST00000641491 MRPL10Q7Z7H8 261 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms