RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 RPS6KC1Q96S38 1066 aa29.17■■■□□ 2.26
VEGFA-231ENST00000640499 PRG3Q9Y2Y8 225 aaPredicted RBP29.17■■■□□ 2.26
VEGFA-231ENST00000640499 PCDHB13Q9Y5F0 798 aa29.17■■■□□ 2.26
VEGFA-231ENST00000640499 CITO14578 2027 aa29.16■■■□□ 2.26
VEGFA-231ENST00000640499 PVALEFA0A1B0GWK0 134 aa29.16■■■□□ 2.26
VEGFA-231ENST00000640499 THP07101 528 aa29.16■■■□□ 2.26
VEGFA-231ENST00000640499 IGFBP6P24592 240 aaPredicted RBP29.16■■■□□ 2.26
VEGFA-231ENST00000640499 GTF2F1P35269 517 aaKnown RBP eCLIP29.16■■■□□ 2.263e-11■■■■■ 42.3
VEGFA-231ENST00000640499 OR1G1P47890 313 aa29.16■■■□□ 2.26
VEGFA-231ENST00000640499 KRT17Q04695 432 aa29.16■■■□□ 2.26
VEGFA-231ENST00000640499 SNW1Q13573 536 aaKnown RBP29.16■■■□□ 2.26
VEGFA-231ENST00000640499 TIGD5Q53EQ6 642 aa29.16■■■□□ 2.26
VEGFA-231ENST00000640499 KRBA2Q6ZNG9 492 aa29.16■■■□□ 2.26
VEGFA-231ENST00000640499 DDX53Q86TM3 631 aaKnown RBP29.16■■■□□ 2.26
VEGFA-231ENST00000640499 ACCSQ96QU6 501 aa29.16■■■□□ 2.26
VEGFA-231ENST00000640499 SOX4Q06945 474 aaPredicted RBP29.15■■■□□ 2.26
VEGFA-231ENST00000640499 HYAL1Q12794 435 aa29.15■■■□□ 2.26
VEGFA-231ENST00000640499 TUSC3Q13454 348 aa29.15■■■□□ 2.26
VEGFA-231ENST00000640499 COL19A1Q14993 1142 aa29.15■■■□□ 2.26
VEGFA-231ENST00000640499 TMEM169Q96HH4 297 aa29.15■■■□□ 2.26
VEGFA-231ENST00000640499 CNTN3Q9P232 1028 aa29.15■■■□□ 2.26
VEGFA-231ENST00000640499 XIRP2A4UGR9 3374 aa29.15■■■□□ 2.26
VEGFA-231ENST00000640499 UNC80Q8N2C7 3258 aa29.14■■■□□ 2.26
VEGFA-231ENST00000640499 OGTO15294 1046 aa29.14■■■□□ 2.26
VEGFA-231ENST00000640499 GADD45BO75293 160 aaPredicted RBP29.14■■■□□ 2.26
VEGFA-231ENST00000640499 CXCL8P10145 99 aa29.14■■■□□ 2.26
VEGFA-231ENST00000640499 KCNE1P15382 129 aa29.14■■■□□ 2.26
VEGFA-231ENST00000640499 MATR3P43243 847 aaKnown RBP eCLIP29.14■■■□□ 2.26
VEGFA-231ENST00000640499 ALCAMQ13740 583 aa29.14■■■□□ 2.26
VEGFA-231ENST00000640499 FAM26FQ5R3K3 315 aa29.14■■■□□ 2.26
VEGFA-231ENST00000640499 TAS1R1Q7RTX1 841 aa29.14■■■□□ 2.26
VEGFA-231ENST00000640499 RNF168Q8IYW5 571 aaPredicted RBP29.14■■■□□ 2.26
VEGFA-231ENST00000640499 TMEM130Q8N3G9 435 aa29.14■■■□□ 2.26
VEGFA-231ENST00000640499 ZSWIM2Q8NEG5 633 aa29.14■■■□□ 2.26
VEGFA-231ENST00000640499 ZNF507Q8TCN5 953 aa29.14■■■□□ 2.26
VEGFA-231ENST00000640499 MSTO1Q9BUK6 570 aa29.14■■■□□ 2.26
VEGFA-231ENST00000640499 PUF60Q9UHX1 559 aaKnown RBP29.14■■■□□ 2.26
VEGFA-231ENST00000640499 CPSF3Q9UKF6 684 aaKnown RBP29.14■■■□□ 2.26
VEGFA-231ENST00000640499 PDCD11Q14690 1871 aaKnown RBP29.13■■■□□ 2.25
VEGFA-231ENST00000640499 BRWD1Q9NSI6 2320 aa29.13■■■□□ 2.25
VEGFA-231ENST00000640499 CASTOR2A6NHX0 329 aa29.13■■■□□ 2.25
VEGFA-231ENST00000640499 HIDE1A8MVS5 230 aa29.13■■■□□ 2.25
VEGFA-231ENST00000640499 ADRB2P07550 413 aa29.13■■■□□ 2.25
VEGFA-231ENST00000640499 CLTAP09496 248 aa29.13■■■□□ 2.25
VEGFA-231ENST00000640499 YARSP54577 528 aaKnown RBP29.13■■■□□ 2.25
VEGFA-231ENST00000640499 ENOX2Q16206 610 aaKnown RBP29.13■■■□□ 2.25
VEGFA-231ENST00000640499 CD300LGQ6UXG3 332 aa29.13■■■□□ 2.25
VEGFA-231ENST00000640499 CRELD2Q6UXH1 353 aaPredicted RBP29.13■■■□□ 2.25
VEGFA-231ENST00000640499 SCFD1Q8WVM8 642 aa29.13■■■□□ 2.25
VEGFA-231ENST00000640499 TCF25Q9BQ70 676 aa29.13■■■□□ 2.25
VEGFA-231ENST00000640499 TOPORSQ9NS56 1045 aaPredicted RBP29.13■■■□□ 2.25
VEGFA-231ENST00000640499 TTC26A0AVF1 554 aa29.12■■■□□ 2.25
VEGFA-231ENST00000640499 CARNS1A5YM72 827 aa29.12■■■□□ 2.25
VEGFA-231ENST00000640499 KMT5BQ4FZB7 885 aa29.12■■■□□ 2.25
VEGFA-231ENST00000640499 PLPP4Q5VZY2 271 aa29.12■■■□□ 2.25
VEGFA-231ENST00000640499 VPS52Q8N1B4 723 aa29.12■■■□□ 2.25
VEGFA-231ENST00000640499 ZBP1Q9H171 429 aa29.12■■■□□ 2.25
VEGFA-231ENST00000640499 GOLGA2P5Q9HBQ8 144 aa29.12■■■□□ 2.25
VEGFA-231ENST00000640499 SLC39A2Q9NP94 309 aa29.12■■■□□ 2.25
VEGFA-231ENST00000640499 ACOT2P49753 483 aa29.11■■■□□ 2.25
VEGFA-231ENST00000640499 DPYDQ12882 1025 aa29.11■■■□□ 2.25
VEGFA-231ENST00000640499 SLFN12LQ6IEE8 588 aa29.11■■■□□ 2.25
VEGFA-231ENST00000640499 MICAL1Q8TDZ2 1067 aa29.11■■■□□ 2.25
VEGFA-231ENST00000640499 C18orf25Q96B23 403 aaPredicted RBP29.11■■■□□ 2.25
VEGFA-231ENST00000640499 EXOC7Q9UPT5 735 aa29.11■■■□□ 2.25
VEGFA-231ENST00000640499 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP29.1■■■□□ 2.25
VEGFA-231ENST00000640499 EIF3DO15371 548 aaKnown RBP eCLIP29.1■■■□□ 2.25
VEGFA-231ENST00000640499 SPAG1Q07617 926 aa29.1■■■□□ 2.25
VEGFA-231ENST00000640499 STK4Q13043 487 aa29.1■■■□□ 2.25
VEGFA-231ENST00000640499 SKIV2LQ15477 1246 aaKnown RBP29.1■■■□□ 2.25
VEGFA-231ENST00000640499 CTC1Q2NKJ3 1217 aa29.1■■■□□ 2.25
VEGFA-231ENST00000640499 PDE12Q6L8Q7 609 aaKnown RBP29.1■■■□□ 2.25
VEGFA-231ENST00000640499 MRPL43Q8N983 215 aaKnown RBP29.1■■■□□ 2.25
VEGFA-231ENST00000640499 TMEM87AQ8NBN3 555 aa29.1■■■□□ 2.25
VEGFA-231ENST00000640499 KIAA0895Q8NCT3 520 aa29.1■■■□□ 2.25
VEGFA-231ENST00000640499 AUTS2Q8WXX7 1259 aa29.1■■■□□ 2.25
VEGFA-231ENST00000640499 CBWD1Q9BRT8 395 aa29.1■■■□□ 2.25
VEGFA-231ENST00000640499 COLEC11Q9BWP8 271 aa29.1■■■□□ 2.25
VEGFA-231ENST00000640499 GPR62Q9BZJ7 368 aa29.1■■■□□ 2.25
VEGFA-231ENST00000640499 PLEKHA5Q9HAU0 1116 aa29.1■■■□□ 2.25
VEGFA-231ENST00000640499 AGO2Q9UKV8 859 aaKnown RBP29.1■■■□□ 2.25
VEGFA-231ENST00000640499 ANK1P16157 1881 aa29.09■■■□□ 2.25
VEGFA-231ENST00000640499 C2orf71A6NGG8 1288 aa29.09■■■□□ 2.25
VEGFA-231ENST00000640499 LACTBL1A8MY62 500 aa29.09■■■□□ 2.25
VEGFA-231ENST00000640499 PER2O15055 1255 aa29.09■■■□□ 2.25
VEGFA-231ENST00000640499 LINC01565O15544 149 aa29.09■■■□□ 2.25
VEGFA-231ENST00000640499 TGFB1I1O43294 461 aa29.09■■■□□ 2.25
VEGFA-231ENST00000640499 LILRB3O75022 631 aa29.09■■■□□ 2.25
VEGFA-231ENST00000640499 KIF4AO95239 1232 aa29.09■■■□□ 2.25
VEGFA-231ENST00000640499 MYL1P05976 194 aa29.09■■■□□ 2.25
VEGFA-231ENST00000640499 CTSAP10619 480 aa29.09■■■□□ 2.25
VEGFA-231ENST00000640499 LTBRP36941 435 aa29.09■■■□□ 2.25
VEGFA-231ENST00000640499 HSP90AA2PQ14568 343 aaPredicted RBP29.09■■■□□ 2.25
VEGFA-231ENST00000640499 ZBTB6Q15916 424 aa29.09■■■□□ 2.25
VEGFA-231ENST00000640499 TMC7Q7Z402 723 aa29.09■■■□□ 2.25
VEGFA-231ENST00000640499 RBM23Q86U06 439 aaKnown RBP29.09■■■□□ 2.25
VEGFA-231ENST00000640499 POMGNT1Q8WZA1 660 aa29.09■■■□□ 2.25
VEGFA-231ENST00000640499 TMEM206Q9H813 350 aa29.09■■■□□ 2.25
VEGFA-231ENST00000640499 ENTPD7Q9NQZ7 604 aa29.09■■■□□ 2.25
VEGFA-231ENST00000640499 GOLGA6L4A6NEF3 574 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms