RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 C11orf70Q9BRQ4 267 aa15.61■□□□□ 0.09
SCARB2-221ENST00000640341 PAGR1Q9BTK6 254 aa15.61■□□□□ 0.09
SCARB2-221ENST00000640341 ZNF277Q9NRM2 450 aaPredicted RBP15.61■□□□□ 0.09
SCARB2-221ENST00000640341 PCYOX1Q9UHG3 505 aa15.61■□□□□ 0.09
SCARB2-221ENST00000640341 R3HDM2Q9Y2K5 976 aaKnown RBP15.61■□□□□ 0.09
SCARB2-221ENST00000640341 UBE4BO95155 1302 aa15.6■□□□□ 0.09
SCARB2-221ENST00000640341 SPDYE2BA6NHP3 402 aa15.6■□□□□ 0.09
SCARB2-221ENST00000640341 PI4K2BG5E9Z4 385 aa15.6■□□□□ 0.09
SCARB2-221ENST00000640341 SPDYE6P0CI01 402 aa15.6■□□□□ 0.09
SCARB2-221ENST00000640341 RARGP13631 454 aa15.6■□□□□ 0.09
SCARB2-221ENST00000640341 CD58P19256 250 aa15.6■□□□□ 0.09
SCARB2-221ENST00000640341 NPTX2P47972 431 aa15.6■□□□□ 0.09
SCARB2-221ENST00000640341 RPS6P62753 249 aaKnown RBP15.6■□□□□ 0.09
SCARB2-221ENST00000640341 FAM47EQ6ZV65 393 aa15.6■□□□□ 0.09
SCARB2-221ENST00000640341 CCDC63Q8NA47 563 aa15.6■□□□□ 0.09
SCARB2-221ENST00000640341 FBXL13Q8NEE6 735 aa15.6■□□□□ 0.09
SCARB2-221ENST00000640341 HAUS1Q96CS2 278 aa15.6■□□□□ 0.09
SCARB2-221ENST00000640341 ZNF317Q96PQ6 595 aaPredicted RBP15.6■□□□□ 0.09
SCARB2-221ENST00000640341 HERPUD2Q9BSE4 406 aa15.6■□□□□ 0.09
SCARB2-221ENST00000640341 AGTP01019 485 aa15.6■□□□□ 0.09
SCARB2-221ENST00000640341 HSPA6P17066 643 aa15.6■□□□□ 0.09
SCARB2-221ENST00000640341 NFIL3Q16649 462 aa15.6■□□□□ 0.09
SCARB2-221ENST00000640341 ARMC9Q7Z3E5 817 aa15.6■□□□□ 0.09
SCARB2-221ENST00000640341 LARGE2Q8N3Y3 721 aa15.6■□□□□ 0.09
SCARB2-221ENST00000640341 PARD3BQ8TEW8 1205 aa15.6■□□□□ 0.09
SCARB2-221ENST00000640341 KIFAP3Q92845 792 aa15.6■□□□□ 0.09
SCARB2-221ENST00000640341 RPS6KC1Q96S38 1066 aa15.6■□□□□ 0.09
SCARB2-221ENST00000640341 RMDN3Q96TC7 470 aa15.6■□□□□ 0.09
SCARB2-221ENST00000640341 TBX20Q9UMR3 447 aa15.6■□□□□ 0.09
SCARB2-221ENST00000640341 TELO2Q9Y4R8 837 aa15.6■□□□□ 0.09
SCARB2-221ENST00000640341 PCDHA3Q9Y5H8 950 aa15.6■□□□□ 0.09
SCARB2-221ENST00000640341 ATXN2Q99700 1313 aaKnown RBP15.6■□□□□ 0.09
SCARB2-221ENST00000640341 RFX1P22670 979 aa15.59■□□□□ 0.09
SCARB2-221ENST00000640341 ACOT2P49753 483 aa15.59■□□□□ 0.09
SCARB2-221ENST00000640341 TAF1LQ8IZX4 1826 aa15.59■□□□□ 0.09
SCARB2-221ENST00000640341 PAEPP09466 180 aa15.59■□□□□ 0.09
SCARB2-221ENST00000640341 CDR2Q01850 454 aa15.59■□□□□ 0.09
SCARB2-221ENST00000640341 SEZ6Q53EL9 994 aa15.59■□□□□ 0.09
SCARB2-221ENST00000640341 ZNF365Q70YC5 407 aa15.59■□□□□ 0.09
SCARB2-221ENST00000640341 ACSF2Q96CM8 615 aaPredicted RBP15.59■□□□□ 0.09
SCARB2-221ENST00000640341 PLVAPQ9BX97 442 aa15.59■□□□□ 0.09
SCARB2-221ENST00000640341 AGO4Q9HCK5 861 aaKnown RBP15.59■□□□□ 0.09
SCARB2-221ENST00000640341 ANAPC5Q9UJX4 755 aa15.59■□□□□ 0.09
SCARB2-221ENST00000640341 GTF3C4Q9UKN8 822 aa15.59■□□□□ 0.09
SCARB2-221ENST00000640341 DHX15O43143 795 aaKnown RBP15.59■□□□□ 0.09
SCARB2-221ENST00000640341 RALAP11233 206 aa15.59■□□□□ 0.09
SCARB2-221ENST00000640341 BRAFP15056 766 aa15.59■□□□□ 0.09
SCARB2-221ENST00000640341 ATF2P15336 505 aa15.59■□□□□ 0.09
SCARB2-221ENST00000640341 CAP2P40123 477 aa15.59■□□□□ 0.09
SCARB2-221ENST00000640341 TRPM8Q7Z2W7 1104 aa15.59■□□□□ 0.09
SCARB2-221ENST00000640341 HOMER3Q9NSC5 361 aa15.59■□□□□ 0.09
SCARB2-221ENST00000640341 ASTN2O75129 1339 aaPredicted RBP15.59■□□□□ 0.09
SCARB2-221ENST00000640341 ATF7P17544 494 aaPredicted RBP15.58■□□□□ 0.09
SCARB2-221ENST00000640341 CNGA2Q16280 664 aa15.58■□□□□ 0.09
SCARB2-221ENST00000640341 ARHGEF16Q5VV41 709 aa15.58■□□□□ 0.09
SCARB2-221ENST00000640341 HELQQ8TDG4 1101 aa15.58■□□□□ 0.09
SCARB2-221ENST00000640341 BSNDQ8WZ55 320 aa15.58■□□□□ 0.09
SCARB2-221ENST00000640341 SHC3Q92529 594 aa15.58■□□□□ 0.09
SCARB2-221ENST00000640341 NSRP1Q9H0G5 558 aaKnown RBP15.58■□□□□ 0.09
SCARB2-221ENST00000640341 C5orf60A6NFR6 353 aa15.58■□□□□ 0.08
SCARB2-221ENST00000640341 PIAS1O75925 651 aa15.58■□□□□ 0.08
SCARB2-221ENST00000640341 UBOX5O94941 541 aa15.58■□□□□ 0.08
SCARB2-221ENST00000640341 CFHP08603 1231 aa15.58■□□□□ 0.08
SCARB2-221ENST00000640341 STX2P32856 288 aa15.58■□□□□ 0.08
SCARB2-221ENST00000640341 FAM182AQ5T1J6 154 aa15.58■□□□□ 0.08
SCARB2-221ENST00000640341 ART4Q93070 314 aa15.58■□□□□ 0.08
SCARB2-221ENST00000640341 FNBP1Q96RU3 617 aa15.58■□□□□ 0.08
SCARB2-221ENST00000640341 NCAPGQ9BPX3 1015 aa15.58■□□□□ 0.08
SCARB2-221ENST00000640341 STRA6Q9BX79 667 aa15.58■□□□□ 0.08
SCARB2-221ENST00000640341 STMN4Q9H169 189 aaPredicted RBP15.58■□□□□ 0.08
SCARB2-221ENST00000640341 GABBR1Q9UBS5 961 aa15.58■□□□□ 0.08
SCARB2-221ENST00000640341 L3MBTL1Q9Y468 752 aa15.58■□□□□ 0.08
SCARB2-221ENST00000640341 ZNF831Q5JPB2 1677 aa15.58■□□□□ 0.08
SCARB2-221ENST00000640341 CCNE2O96020 404 aa15.58■□□□□ 0.08
SCARB2-221ENST00000640341 GZMAP12544 262 aa15.58■□□□□ 0.08
SCARB2-221ENST00000640341 NSFP46459 744 aaKnown RBP15.58■□□□□ 0.08
SCARB2-221ENST00000640341 DRG2P55039 364 aaKnown RBP15.58■□□□□ 0.08
SCARB2-221ENST00000640341 CLUL1Q15846 466 aa15.58■□□□□ 0.08
SCARB2-221ENST00000640341 ZNF394Q53GI3 561 aa15.58■□□□□ 0.08
SCARB2-221ENST00000640341 C1orf112Q9NSG2 853 aa15.58■□□□□ 0.08
SCARB2-221ENST00000640341 FEM1BQ9UK73 627 aa15.58■□□□□ 0.08
SCARB2-221ENST00000640341 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.58■□□□□ 0.08
SCARB2-221ENST00000640341 SPAG7O75391 227 aa15.57■□□□□ 0.08
SCARB2-221ENST00000640341 GAS8O95995 478 aa15.57■□□□□ 0.08
SCARB2-221ENST00000640341 DRP2Q13474 957 aa15.57■□□□□ 0.08
SCARB2-221ENST00000640341 TMED2Q15363 201 aa15.57■□□□□ 0.08
SCARB2-221ENST00000640341 ATP13A4Q4VNC1 1196 aa15.57■□□□□ 0.08
SCARB2-221ENST00000640341 FAM160B2Q86V87 743 aa15.57■□□□□ 0.08
SCARB2-221ENST00000640341 FAM212AQ96EL1 285 aa15.57■□□□□ 0.08
SCARB2-221ENST00000640341 RUNDC3BQ96NL0 473 aa15.57■□□□□ 0.08
SCARB2-221ENST00000640341 MYCBPQ99417 103 aaPredicted RBP15.57■□□□□ 0.08
SCARB2-221ENST00000640341 ANKFY1Q9P2R3 1169 aa15.57■□□□□ 0.08
SCARB2-221ENST00000640341 POC1B-GALNT4F8VUJ3 575 aa15.57■□□□□ 0.08
SCARB2-221ENST00000640341 KRT10P13645 584 aa15.57■□□□□ 0.08
SCARB2-221ENST00000640341 GTF2BQ00403 316 aa15.57■□□□□ 0.08
SCARB2-221ENST00000640341 SIX1Q15475 284 aaPredicted RBP15.57■□□□□ 0.08
SCARB2-221ENST00000640341 SWT1Q5T5J6 900 aaKnown RBP15.57■□□□□ 0.08
SCARB2-221ENST00000640341 ACAD10Q6JQN1 1059 aa15.57■□□□□ 0.08
SCARB2-221ENST00000640341 CYP4X1Q8N118 509 aa15.57■□□□□ 0.08
SCARB2-221ENST00000640341 SYTL5Q8TDW5 730 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms