RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 INPP5FQ9Y2H2 1132 aa15.3■□□□□ 0.04
SCARB2-216ENST00000639300 SH3BP5O60239 455 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 OPHN1O60890 802 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 DPEP1P16444 411 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 SEPT6Q14141 434 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 EMC2Q15006 297 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 SH2D4BQ5SQS7 431 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 SPOPLQ6IQ16 392 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 RWDD4Q6NW29 188 aaKnown RBP15.29■□□□□ 0.04
SCARB2-216ENST00000639300 RBM15Q96T37 977 aaKnown RBP eCLIP15.29■□□□□ 0.04
SCARB2-216ENST00000639300 TRIM55Q9BYV6 548 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 KLHL8Q9P2G9 620 aaPredicted RBP15.29■□□□□ 0.04
SCARB2-216ENST00000639300 SUCLA2Q9P2R7 463 aaPredicted RBP15.29■□□□□ 0.04
SCARB2-216ENST00000639300 MYO5BQ9ULV0 1848 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 ZSCAN5CA6NGD5 496 aaPredicted RBP15.29■□□□□ 0.04
SCARB2-216ENST00000639300 SPDYE16A6NNV3 312 aaPredicted RBP15.29■□□□□ 0.04
SCARB2-216ENST00000639300 MYBL1P10243 752 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 EFNA5P52803 228 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 SPDYE2Q495Y8 402 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 METTL23Q86XA0 190 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 GBP7Q8N8V2 638 aaPredicted RBP15.29■□□□□ 0.04
SCARB2-216ENST00000639300 HIPK4Q8NE63 616 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 KIF12Q96FN5 646 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 GBP5Q96PP8 586 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 OSBPL8Q9BZF1 889 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 SLC13A1Q9BZW2 595 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 ELP3Q9H9T3 547 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 RIC1Q4ADV7 1423 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 TCP11X1B4DZS4 312 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 NFIBO00712 420 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 CREB3O43889 395 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 OATP04181 439 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 CAP2P40123 477 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 RGS7P49802 495 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 SLC29A2Q14542 456 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 CASKIN2Q8WXE0 1202 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 ZKSCAN4Q969J2 545 aaPredicted RBP15.29■□□□□ 0.04
SCARB2-216ENST00000639300 HDAC11Q96DB2 347 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 CALR3Q96L12 384 aaKnown RBP15.29■□□□□ 0.04
SCARB2-216ENST00000639300 POP1Q99575 1024 aaKnown RBP15.29■□□□□ 0.04
SCARB2-216ENST00000639300 ISCUQ9H1K1 167 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 MYOZ2Q9NPC6 264 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 AGAP1Q9UPQ3 857 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 SPATA31A6Q5VVP1 1343 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 FAM237AA0A1B0GTK4 181 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 A8MXQ7 604 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 HUS1O60921 280 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 MYCP01106 439 aaPredicted RBP15.29■□□□□ 0.04
SCARB2-216ENST00000639300 ADORA2BP29275 332 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 TNFAIP2Q03169 654 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 TMEM8AQ9HCN3 771 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 RNF181Q9P0P0 153 aa15.29■□□□□ 0.04
SCARB2-216ENST00000639300 GMPSP49915 693 aaPredicted RBP15.28■□□□□ 0.04
SCARB2-216ENST00000639300 NOP14P78316 857 aaKnown RBP15.28■□□□□ 0.04
SCARB2-216ENST00000639300 TKFCQ3LXA3 575 aa15.28■□□□□ 0.04
SCARB2-216ENST00000639300 HDAC7Q8WUI4 952 aa15.28■□□□□ 0.04
SCARB2-216ENST00000639300 MCEEQ96PE7 176 aa15.28■□□□□ 0.04
SCARB2-216ENST00000639300 TIPINQ9BVW5 301 aa15.28■□□□□ 0.04
SCARB2-216ENST00000639300 LRRC10BA6NIK2 292 aa15.28■□□□□ 0.04
SCARB2-216ENST00000639300 ZBTB39O15060 712 aa15.28■□□□□ 0.04
SCARB2-216ENST00000639300 MEFVO15553 781 aaPredicted RBP15.28■□□□□ 0.04
SCARB2-216ENST00000639300 GRAP2O75791 330 aa15.28■□□□□ 0.04
SCARB2-216ENST00000639300 CHN1P15882 459 aa15.28■□□□□ 0.04
SCARB2-216ENST00000639300 ZNF473Q8WTR7 871 aaKnown RBP15.28■□□□□ 0.04
SCARB2-216ENST00000639300 TTC25Q96NG3 672 aa15.28■□□□□ 0.04
SCARB2-216ENST00000639300 EPN3Q9H201 632 aa15.28■□□□□ 0.04
SCARB2-216ENST00000639300 CARD9Q9H257 536 aa15.28■□□□□ 0.04
SCARB2-216ENST00000639300 ETNK1Q9HBU6 452 aa15.28■□□□□ 0.04
SCARB2-216ENST00000639300 GGA3Q9NZ52 723 aa15.28■□□□□ 0.04
SCARB2-216ENST00000639300 DCCP43146 1447 aa15.28■□□□□ 0.04
SCARB2-216ENST00000639300 FAM86B1E9PN63 330 aa15.28■□□□□ 0.04
SCARB2-216ENST00000639300 KRT38O76015 456 aa15.28■□□□□ 0.04
SCARB2-216ENST00000639300 SGPL1O95470 568 aa15.28■□□□□ 0.04
SCARB2-216ENST00000639300 FAM86B2P0C5J1 330 aa15.28■□□□□ 0.04
SCARB2-216ENST00000639300 KITP10721 976 aa15.28■□□□□ 0.04
SCARB2-216ENST00000639300 P3H1Q32P28 736 aa15.28■□□□□ 0.04
SCARB2-216ENST00000639300 MDM1Q8TC05 714 aa15.28■□□□□ 0.04
SCARB2-216ENST00000639300 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.28■□□□□ 0.04
SCARB2-216ENST00000639300 LRRC37BQ96QE4 947 aa15.28■□□□□ 0.04
SCARB2-216ENST00000639300 MMP19Q99542 508 aa15.28■□□□□ 0.04
SCARB2-216ENST00000639300 PRMT1Q99873 361 aaKnown RBP15.28■□□□□ 0.04
SCARB2-216ENST00000639300 BCAP29Q9UHQ4 241 aa15.28■□□□□ 0.04
SCARB2-216ENST00000639300 ARHGAP23Q9P227 1491 aa15.28■□□□□ 0.04
SCARB2-216ENST00000639300 SLC26A4O43511 780 aa15.27■□□□□ 0.04
SCARB2-216ENST00000639300 MAP3K21Q5TCX8 1036 aa15.27■□□□□ 0.04
SCARB2-216ENST00000639300 ZNF720Q7Z2F6 126 aa15.27■□□□□ 0.04
SCARB2-216ENST00000639300 NOL3O60936 208 aaKnown RBP15.27■□□□□ 0.04
SCARB2-216ENST00000639300 VPS11Q9H270 941 aa15.27■□□□□ 0.04
SCARB2-216ENST00000639300 TBX20Q9UMR3 447 aa15.27■□□□□ 0.04
SCARB2-216ENST00000639300 SNX9Q9Y5X1 595 aa15.27■□□□□ 0.04
SCARB2-216ENST00000639300 CHUKO15111 745 aa15.27■□□□□ 0.03
SCARB2-216ENST00000639300 CFLARO15519 480 aa15.27■□□□□ 0.03
SCARB2-216ENST00000639300 GLI1P08151 1106 aa15.27■□□□□ 0.03
SCARB2-216ENST00000639300 HSD17B3P37058 310 aa15.27■□□□□ 0.03
SCARB2-216ENST00000639300 SLC1A1P43005 524 aa15.27■□□□□ 0.03
SCARB2-216ENST00000639300 EIF3EP60228 445 aaKnown RBP15.27■□□□□ 0.03
SCARB2-216ENST00000639300 TAF11Q15544 211 aa15.27■□□□□ 0.03
SCARB2-216ENST00000639300 HIF1AQ16665 826 aa15.27■□□□□ 0.03
SCARB2-216ENST00000639300 MOXD1Q6UVY6 613 aa15.27■□□□□ 0.03
SCARB2-216ENST00000639300 RNF139Q8WU17 664 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms