RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 POLR2MP0CAP2 368 aa11.67□□□□□ -0.54
SNIP1-204ENST00000638725 CYP11B1P15538 503 aa11.67□□□□□ -0.54
SNIP1-204ENST00000638725 ITIH2P19823 946 aa11.67□□□□□ -0.54
SNIP1-204ENST00000638725 MUTP22033 750 aa11.67□□□□□ -0.54
SNIP1-204ENST00000638725 STX2P32856 288 aa11.67□□□□□ -0.54
SNIP1-204ENST00000638725 SAMD1Q6SPF0 538 aaPredicted RBP11.67□□□□□ -0.54
SNIP1-204ENST00000638725 GBP7Q8N8V2 638 aaPredicted RBP11.67□□□□□ -0.54
SNIP1-204ENST00000638725 SHC3Q92529 594 aa11.67□□□□□ -0.54
SNIP1-204ENST00000638725 SLCO2A1Q92959 643 aa11.67□□□□□ -0.54
SNIP1-204ENST00000638725 ACCSQ96QU6 501 aa11.67□□□□□ -0.54
SNIP1-204ENST00000638725 WDR11Q9BZH6 1224 aa11.67□□□□□ -0.54
SNIP1-204ENST00000638725 TRIM7Q9C029 511 aa11.67□□□□□ -0.54
SNIP1-204ENST00000638725 ARHGEF3Q9NR81 526 aa11.67□□□□□ -0.54
SNIP1-204ENST00000638725 UVRAGQ9P2Y5 699 aa11.67□□□□□ -0.54
SNIP1-204ENST00000638725 ECE1P42892 770 aa11.66□□□□□ -0.54
SNIP1-204ENST00000638725 PHLDB2Q86SQ0 1253 aa11.66□□□□□ -0.54
SNIP1-204ENST00000638725 ERICH1Q86X53 443 aa11.66□□□□□ -0.54
SNIP1-204ENST00000638725 SRRM1Q8IYB3 904 aaKnown RBP11.66□□□□□ -0.54
SNIP1-204ENST00000638725 ANKLE1Q8NAG6 615 aa11.66□□□□□ -0.54
SNIP1-204ENST00000638725 NGLY1Q96IV0 654 aa11.66□□□□□ -0.54
SNIP1-204ENST00000638725 ZNF570Q96NI8 536 aa11.66□□□□□ -0.54
SNIP1-204ENST00000638725 TMEM206Q9H813 350 aa11.66□□□□□ -0.54
SNIP1-204ENST00000638725 RXFP1Q9HBX9 757 aa11.66□□□□□ -0.54
SNIP1-204ENST00000638725 LARSQ9P2J5 1176 aaKnown RBP11.66□□□□□ -0.54
SNIP1-204ENST00000638725 IPO5O00410 1097 aaKnown RBP11.66□□□□□ -0.54
SNIP1-204ENST00000638725 POLRMTO00411 1230 aaKnown RBP11.66□□□□□ -0.54
SNIP1-204ENST00000638725 MSH2P43246 934 aa11.66□□□□□ -0.54
SNIP1-204ENST00000638725 STAT2P52630 851 aa11.66□□□□□ -0.54
SNIP1-204ENST00000638725 SLC8A3P57103 927 aa11.66□□□□□ -0.54
SNIP1-204ENST00000638725 PTK6Q13882 451 aa11.66□□□□□ -0.54
SNIP1-204ENST00000638725 B3GNT9Q6UX72 402 aa11.66□□□□□ -0.54
SNIP1-204ENST00000638725 PAXIP1Q6ZW49 1069 aaPredicted RBP11.66□□□□□ -0.54
SNIP1-204ENST00000638725 ASRGL1Q7L266 308 aa11.66□□□□□ -0.54
SNIP1-204ENST00000638725 TRMT1LQ7Z2T5 733 aaKnown RBP11.66□□□□□ -0.54
SNIP1-204ENST00000638725 MAB21L3Q8N8X9 362 aa11.66□□□□□ -0.54
SNIP1-204ENST00000638725 C7orf43Q8WVR3 580 aa11.66□□□□□ -0.54
SNIP1-204ENST00000638725 DHX38Q92620 1227 aaKnown RBP11.66□□□□□ -0.54
SNIP1-204ENST00000638725 FAXDC2Q96IV6 333 aa11.66□□□□□ -0.54
SNIP1-204ENST00000638725 FAM118BQ9BPY3 351 aa11.66□□□□□ -0.54
SNIP1-204ENST00000638725 IDI2Q9BXS1 227 aa11.66□□□□□ -0.54
SNIP1-204ENST00000638725 ANAPC7Q9UJX3 599 aa11.66□□□□□ -0.54
SNIP1-204ENST00000638725 R3HDM2Q9Y2K5 976 aaKnown RBP11.66□□□□□ -0.54
SNIP1-204ENST00000638725 SKAP2O75563 359 aaPredicted RBP11.65□□□□□ -0.54
SNIP1-204ENST00000638725 ATF2P15336 505 aa11.65□□□□□ -0.54
SNIP1-204ENST00000638725 CDC25CP30307 473 aa11.65□□□□□ -0.54
SNIP1-204ENST00000638725 MFAP3P55082 362 aa11.65□□□□□ -0.54
SNIP1-204ENST00000638725 CDR2Q01850 454 aa11.65□□□□□ -0.54
SNIP1-204ENST00000638725 DAB2IPQ5VWQ8 1189 aa11.65□□□□□ -0.54
SNIP1-204ENST00000638725 FAM47EQ6ZV65 393 aa11.65□□□□□ -0.54
SNIP1-204ENST00000638725 CBWD2Q8IUF1 395 aa11.65□□□□□ -0.54
SNIP1-204ENST00000638725 CCDC127Q96BQ5 260 aa11.65□□□□□ -0.54
SNIP1-204ENST00000638725 IFT74Q96LB3 600 aa11.65□□□□□ -0.54
SNIP1-204ENST00000638725 ANAPC5Q9UJX4 755 aa11.65□□□□□ -0.54
SNIP1-204ENST00000638725 ZNFX1Q9P2E3 1918 aaKnown RBP11.65□□□□□ -0.54
SNIP1-204ENST00000638725 KLRG2A4D1S0 409 aaPredicted RBP11.65□□□□□ -0.54
SNIP1-204ENST00000638725 CCND1P24385 295 aa11.65□□□□□ -0.54
SNIP1-204ENST00000638725 MAPK4P31152 587 aa11.65□□□□□ -0.54
SNIP1-204ENST00000638725 ADCY8P40145 1251 aa11.65□□□□□ -0.54
SNIP1-204ENST00000638725 RBM26Q5T8P6 1007 aaKnown RBP11.65□□□□□ -0.54
SNIP1-204ENST00000638725 PRUNE1Q86TP1 453 aa11.65□□□□□ -0.54
SNIP1-204ENST00000638725 ECHDC2Q86YB7 292 aa11.65□□□□□ -0.54
SNIP1-204ENST00000638725 TEX2Q8IWB9 1127 aa11.65□□□□□ -0.54
SNIP1-204ENST00000638725 C12orf56Q8IXR9 622 aa11.65□□□□□ -0.54
SNIP1-204ENST00000638725 HELQQ8TDG4 1101 aa11.65□□□□□ -0.54
SNIP1-204ENST00000638725 C9orf72Q96LT7 481 aa11.65□□□□□ -0.54
SNIP1-204ENST00000638725 PLVAPQ9BX97 442 aa11.65□□□□□ -0.54
SNIP1-204ENST00000638725 DCLK3Q9C098 648 aa11.65□□□□□ -0.54
SNIP1-204ENST00000638725 TOPORSQ9NS56 1045 aaPredicted RBP11.65□□□□□ -0.54
SNIP1-204ENST00000638725 KLHL14Q9P2G3 628 aa11.65□□□□□ -0.54
SNIP1-204ENST00000638725 NAALADL1Q9UQQ1 740 aa11.65□□□□□ -0.54
SNIP1-204ENST00000638725 TMEM150BA6NC51 233 aa11.64□□□□□ -0.55
SNIP1-204ENST00000638725 SLC16A4O15374 487 aa11.64□□□□□ -0.55
SNIP1-204ENST00000638725 VIL1P09327 827 aaKnown RBP11.64□□□□□ -0.55
SNIP1-204ENST00000638725 FOXN2P32314 431 aa11.64□□□□□ -0.55
SNIP1-204ENST00000638725 PDE6BP35913 854 aa11.64□□□□□ -0.55
SNIP1-204ENST00000638725 ACAD10Q6JQN1 1059 aa11.64□□□□□ -0.55
SNIP1-204ENST00000638725 LLGL2Q6P1M3 1020 aa11.64□□□□□ -0.55
SNIP1-204ENST00000638725 MIER3Q7Z3K6 550 aa11.64□□□□□ -0.55
SNIP1-204ENST00000638725 HAUS6Q7Z4H7 955 aa11.64□□□□□ -0.55
SNIP1-204ENST00000638725 DDX1Q92499 740 aaKnown RBP11.64□□□□□ -0.55
SNIP1-204ENST00000638725 SAAL1Q96ER3 474 aa11.64□□□□□ -0.55
SNIP1-204ENST00000638725 MAGEB18Q96M61 343 aa11.64□□□□□ -0.55
SNIP1-204ENST00000638725 HEMGNQ9BXL5 484 aa11.64□□□□□ -0.55
SNIP1-204ENST00000638725 NKIRAS1Q9NYS0 192 aa11.64□□□□□ -0.55
SNIP1-204ENST00000638725 ADAM22Q9P0K1 906 aa11.64□□□□□ -0.55
SNIP1-204ENST00000638725 ZBTB21Q9ULJ3 1066 aa11.64□□□□□ -0.55
SNIP1-204ENST00000638725 ADGRA3Q8IWK6 1321 aa11.64□□□□□ -0.55
SNIP1-204ENST00000638725 KDM4FA0A1W2PPD8 638 aa11.64□□□□□ -0.55
SNIP1-204ENST00000638725 GRIN3BO60391 1043 aa11.64□□□□□ -0.55
SNIP1-204ENST00000638725 NEBLO76041 1014 aa11.64□□□□□ -0.55
SNIP1-204ENST00000638725 GAS8O95995 478 aa11.64□□□□□ -0.55
SNIP1-204ENST00000638725 PLS3P13797 630 aa11.64□□□□□ -0.55
SNIP1-204ENST00000638725 TAC1P20366 129 aa11.64□□□□□ -0.55
SNIP1-204ENST00000638725 RRM1P23921 792 aa11.64□□□□□ -0.55
SNIP1-204ENST00000638725 MTFR1Q15390 333 aa11.64□□□□□ -0.55
SNIP1-204ENST00000638725 C2CD6Q53TS8 623 aa11.64□□□□□ -0.55
SNIP1-204ENST00000638725 ARHGEF18Q6ZSZ5 1173 aa11.64□□□□□ -0.55
SNIP1-204ENST00000638725 BZW1Q7L1Q6 419 aaKnown RBP11.64□□□□□ -0.55
SNIP1-204ENST00000638725 ACER1Q8TDN7 264 aa11.64□□□□□ -0.55
SNIP1-204ENST00000638725 PLCD4Q9BRC7 762 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms