RNA–Protein interactions for RNA: ENST00000637439.1

CIITA-215, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-215ENST00000637439 POU2F2P09086 479 aa19.71■□□□□ 0.75
CIITA-215ENST00000637439 CYP11B2P19099 503 aa19.71■□□□□ 0.75
CIITA-215ENST00000637439 MUTP22033 750 aa19.71■□□□□ 0.75
CIITA-215ENST00000637439 RPA1P27694 616 aa19.71■□□□□ 0.75
CIITA-215ENST00000637439 UVSSAQ2YD98 709 aa19.71■□□□□ 0.75
CIITA-215ENST00000637439 DCAF4L1Q3SXM0 396 aa19.71■□□□□ 0.75
CIITA-215ENST00000637439 ZC3H14Q6PJT7 736 aaKnown RBP19.71■□□□□ 0.75
CIITA-215ENST00000637439 PADI6Q6TGC4 694 aa19.71■□□□□ 0.75
CIITA-215ENST00000637439 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.71■□□□□ 0.75
CIITA-215ENST00000637439 MTSS1LQ765P7 747 aa19.71■□□□□ 0.75
CIITA-215ENST00000637439 RTL10Q7L3V2 364 aa19.71■□□□□ 0.75
CIITA-215ENST00000637439 ERMP1Q7Z2K6 904 aa19.71■□□□□ 0.75
CIITA-215ENST00000637439 APBB1IPQ7Z5R6 666 aaPredicted RBP19.71■□□□□ 0.75
CIITA-215ENST00000637439 KCNG4Q8TDN1 519 aa19.71■□□□□ 0.75
CIITA-215ENST00000637439 CCDC113Q9H0I3 377 aa19.71■□□□□ 0.75
CIITA-215ENST00000637439 WDR87Q6ZQQ6 2873 aa19.7■□□□□ 0.74
CIITA-215ENST00000637439 JAK2O60674 1132 aa19.7■□□□□ 0.74
CIITA-215ENST00000637439 EIF5BO60841 1220 aaKnown RBP19.7■□□□□ 0.74
CIITA-215ENST00000637439 ID4P47928 161 aa19.7■□□□□ 0.74
CIITA-215ENST00000637439 RBM25P49756 843 aaKnown RBP19.7■□□□□ 0.74
CIITA-215ENST00000637439 EFNA5P52803 228 aa19.7■□□□□ 0.74
CIITA-215ENST00000637439 FOSBP53539 338 aa19.7■□□□□ 0.74
CIITA-215ENST00000637439 NAB2Q15742 525 aa19.7■□□□□ 0.74
CIITA-215ENST00000637439 SPECC1Q5M775 1068 aa19.7■□□□□ 0.74
CIITA-215ENST00000637439 POTEGQ6S5H5 508 aa19.7■□□□□ 0.74
CIITA-215ENST00000637439 NOSTRINQ8IVI9 506 aa19.7■□□□□ 0.74
CIITA-215ENST00000637439 IFT74Q96LB3 600 aa19.7■□□□□ 0.74
CIITA-215ENST00000637439 GVINP1Q7Z2Y8 2422 aa19.7■□□□□ 0.74
CIITA-215ENST00000637439 TTLL13PA6NNM8 815 aa19.69■□□□□ 0.74
CIITA-215ENST00000637439 TMEM189-UBE2V1I3L0A0 370 aa19.69■□□□□ 0.74
CIITA-215ENST00000637439 DCNP07585 359 aaKnown RBP19.69■□□□□ 0.74
CIITA-215ENST00000637439 STARD6P59095 220 aa19.69■□□□□ 0.74
CIITA-215ENST00000637439 RAB33AQ14088 237 aa19.69■□□□□ 0.74
CIITA-215ENST00000637439 HAUS3Q68CZ6 603 aa19.69■□□□□ 0.74
CIITA-215ENST00000637439 PJA1Q8NG27 643 aa19.69■□□□□ 0.74
CIITA-215ENST00000637439 BSNDQ8WZ55 320 aa19.69■□□□□ 0.74
CIITA-215ENST00000637439 FGF13Q92913 245 aa19.69■□□□□ 0.74
CIITA-215ENST00000637439 FGF14Q92915 247 aa19.69■□□□□ 0.74
CIITA-215ENST00000637439 UROC1Q96N76 676 aa19.69■□□□□ 0.74
CIITA-215ENST00000637439 DLGAP2Q9P1A6 1054 aa19.69■□□□□ 0.74
CIITA-215ENST00000637439 POLIQ9UNA4 740 aa19.69■□□□□ 0.74
CIITA-215ENST00000637439 ZNF292O60281 2723 aa19.69■□□□□ 0.74
CIITA-215ENST00000637439 CCL16O15467 120 aa19.68■□□□□ 0.74
CIITA-215ENST00000637439 TRAPPC3O43617 180 aa19.68■□□□□ 0.74
CIITA-215ENST00000637439 OR52Z1P0C646 297 aa19.68■□□□□ 0.74
CIITA-215ENST00000637439 LIG1P18858 919 aa19.68■□□□□ 0.74
CIITA-215ENST00000637439 FGFR3P22607 806 aa19.68■□□□□ 0.74
CIITA-215ENST00000637439 NEK4P51957 841 aa19.68■□□□□ 0.74
CIITA-215ENST00000637439 GPC5P78333 572 aa19.68■□□□□ 0.74
CIITA-215ENST00000637439 AXDND1Q5T1B0 1012 aaPredicted RBP19.68■□□□□ 0.74
CIITA-215ENST00000637439 PARM1Q6UWI2 310 aa19.68■□□□□ 0.74
CIITA-215ENST00000637439 C1orf210Q8IVY1 113 aa19.68■□□□□ 0.74
CIITA-215ENST00000637439 SLC7A14Q8TBB6 771 aa19.68■□□□□ 0.74
CIITA-215ENST00000637439 KIFAP3Q92845 792 aa19.68■□□□□ 0.74
CIITA-215ENST00000637439 KCNH3Q9ULD8 1083 aa19.68■□□□□ 0.74
CIITA-215ENST00000637439 GDAQ9Y2T3 454 aa19.68■□□□□ 0.74
CIITA-215ENST00000637439 MYH15Q9Y2K3 1946 aa19.67■□□□□ 0.74
CIITA-215ENST00000637439 B3GAT3O94766 335 aa19.67■□□□□ 0.74
CIITA-215ENST00000637439 OR1D2P34982 312 aa19.67■□□□□ 0.74
CIITA-215ENST00000637439 NTHL1P78549 312 aa19.67■□□□□ 0.74
CIITA-215ENST00000637439 PFKPQ01813 784 aa19.67■□□□□ 0.74
CIITA-215ENST00000637439 EEF1DP3Q658K8 133 aa19.67■□□□□ 0.74
CIITA-215ENST00000637439 MTRRQ9UBK8 725 aa19.67■□□□□ 0.74
CIITA-215ENST00000637439 R4GN57 208 aa19.67■□□□□ 0.74
CIITA-215ENST00000637439 ADAM12O43184 909 aa19.66■□□□□ 0.74
CIITA-215ENST00000637439 SP9P0CG40 484 aa19.66■□□□□ 0.74
CIITA-215ENST00000637439 PRKCQQ04759 706 aa19.66■□□□□ 0.74
CIITA-215ENST00000637439 ZNF174Q15697 407 aa19.66■□□□□ 0.74
CIITA-215ENST00000637439 ATF7IP2Q5U623 682 aa19.66■□□□□ 0.74
CIITA-215ENST00000637439 ANKS3Q6ZW76 656 aa19.66■□□□□ 0.74
CIITA-215ENST00000637439 BORCS6Q96GS4 357 aa19.66■□□□□ 0.74
CIITA-215ENST00000637439 PPP1R10Q96QC0 940 aaKnown RBP19.66■□□□□ 0.74
CIITA-215ENST00000637439 RPP25Q9BUL9 199 aaKnown RBP19.66■□□□□ 0.74
CIITA-215ENST00000637439 CXCL16Q9H2A7 254 aa19.66■□□□□ 0.74
CIITA-215ENST00000637439 FOXP1Q9H334 677 aaPredicted RBP19.66■□□□□ 0.74
CIITA-215ENST00000637439 BACE2Q9Y5Z0 518 aa19.66■□□□□ 0.74
CIITA-215ENST00000637439 STK24Q9Y6E0 443 aa19.66■□□□□ 0.74
CIITA-215ENST00000637439 VWA8A3KMH1 1905 aa19.66■□□□□ 0.74
CIITA-215ENST00000637439 DOCK6Q96HP0 2047 aa19.66■□□□□ 0.74
CIITA-215ENST00000637439 KANSL1LA0AUZ9 987 aa19.65■□□□□ 0.74
CIITA-215ENST00000637439 EDN1P05305 212 aa19.65■□□□□ 0.74
CIITA-215ENST00000637439 GUCY1B3Q02153 619 aa19.65■□□□□ 0.74
CIITA-215ENST00000637439 SNW1Q13573 536 aaKnown RBP19.65■□□□□ 0.74
CIITA-215ENST00000637439 MLF2Q15773 248 aaPredicted RBP19.65■□□□□ 0.74
CIITA-215ENST00000637439 PABPC1LQ4VXU2 614 aaKnown RBP19.65■□□□□ 0.74
CIITA-215ENST00000637439 RSPO2Q6UXX9 243 aaPredicted RBP19.65■□□□□ 0.74
CIITA-215ENST00000637439 ST13P5Q8NFI4 369 aaPredicted RBP19.65■□□□□ 0.74
CIITA-215ENST00000637439 ITFG1Q8TB96 612 aa19.65■□□□□ 0.74
CIITA-215ENST00000637439 C8orf76Q96K31 380 aa19.65■□□□□ 0.74
CIITA-215ENST00000637439 BCO2Q9BYV7 579 aa19.65■□□□□ 0.74
CIITA-215ENST00000637439 OSBPL6Q9BZF3 934 aa19.65■□□□□ 0.74
CIITA-215ENST00000637439 FOXQ1Q9C009 403 aa19.65■□□□□ 0.74
CIITA-215ENST00000637439 TOPORSQ9NS56 1045 aaPredicted RBP19.65■□□□□ 0.74
CIITA-215ENST00000637439 USP20Q9Y2K6 914 aa19.65■□□□□ 0.74
CIITA-215ENST00000637439 CDY1Q9Y6F8 540 aa19.65■□□□□ 0.74
CIITA-215ENST00000637439 K7ERI5 159 aa19.64■□□□□ 0.73
CIITA-215ENST00000637439 CCT6AP40227 531 aaKnown RBP19.64■□□□□ 0.73
CIITA-215ENST00000637439 MAGEA9P43362 315 aa19.64■□□□□ 0.73
CIITA-215ENST00000637439 CLCNKBP51801 687 aa19.64■□□□□ 0.73
CIITA-215ENST00000637439 YARSP54577 528 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms